Search Results - Python Software Package

DynamiSpectra: A Python Software Package and Web Platform for Molecular Dynamics Data Analysis in Computational Biology

Authors: Iverson Conrado Bezerra Jéssika de Oliveira Viana Karen Cacilda Weber et al.

Source: J Chem Inf Model

Subject Terms: Application Note

Access URL: https://pmc.ncbi.nlm.nih.gov/articles/PMC12421658/
https://doi.org/10.1021/acs.jcim.5c01270
https://pubmed.ncbi.nlm.nih.gov/40835585/

RockDisc-Gen: A python software package for rock discontinuity generation

Authors: Yujie Su Hong Gao Han Meng et al.

Source: SoftwareX, Vol 32, Iss , Pp 102369- (2025)

Subject Terms: Rock discontinuity generation, Deep learning, Monte Carlo method, Computer software, QA76.75-76.765

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2352711025003358; https://doaj.org/toc/2352-7110

Access URL: https://doaj.org/article/25dc7da5dc2640cbae9b88a4074c4168

Modelling rainfall with a Bartlett–Lewis process: pyBL (v1.0.0), a Python software package and an application with short records

Authors: C.-L. Wei P.-C. Chen C.-Y. Tseng et al.

Source: eISSN
Geoscientific Model Development, Vol 18, Pp 1357-1373 (2025)

Subject Terms: QE1-996.5, 13. Climate action, Geology

File Description: application/pdf

Access URL: https://egusphere.copernicus.org/preprints/2024/egusphere-2024-1918/
https://gmd.copernicus.org/articles/18/1357/2025/
https://doaj.org/article/25fab5640b7a4251b96d9cf4d67a282d

Python Software Package for Automatic Generation and Verification of BPA Simulation Data Aimed at Load Flow Analysis

Authors: Jifan Zhang Hengxu Zhang Xiaohan Shi et al.

Source: 2023 International Conference on Power System Technology (PowerCon). :1-5

DynamiSpectra: A Python Software Package and Web Platform for Molecular Dynamics Data Analysis in Computational Biology.

Authors: Bezerra, Iverson Conrado de Oliveira Viana, Jéssika Weber, Karen Cacilda et al.

Source: Journal of Chemical Information & Modeling. 9/8/2025, Vol. 65 Issue 17, p8901-8910. 10p.

PACMan: A software package for automated single-cell chlorophyll fluorometry

Authors: Pontén, Olle Xiao, Linhong Kutter, Jeanne et al.

Source: Science for Life Laboratory – a national resource center for high–throughput molecular bioscience Cytometry Part A. 105(3):203-213

Subject Terms: Chlamydomonas reinhardtii, microalgae, microfluidics, microscopy automation, MICROSCOPY-PAM, pulse-amplitude-modulated chlorophyll fluorometry, Symbiodiniaceae

File Description: electronic

Access URL: https://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-528379
https://doi.org/10.1002/cyto.a.24808

A Python diagnostics package for evaluation of Madden–Julian Oscillation (MJO) teleconnections in subseasonal-to-seasonal (S2S) forecast systems

Authors: Cristiana Stan Saisri Kollapaneni Andrea M. Jenney et al.

Source: Geoscientific Model Development. 18:7969-7985

Version 2.0 - pyFIRI — A free and open source Python software package of the non-auroral Earth’s lower ionosphere

Authors: Oleg Zolotov Yulia Romanovskaya Maria Knyazeva

Source: SoftwareX, Vol 20, Iss , Pp 101263- (2022)

Subject Terms: FIRI model, D-region, Earth’s lower ionosphere, Python, Computer software, QA76.75-76.765

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2352711022001819; https://doaj.org/toc/2352-7110

Access URL: https://doaj.org/article/262f8fe6069341e886b71ef0cfaf3aa5

pyFIRI — A free and open source Python software package of the non-auroral Earth’s lower ionosphere

Authors: Oleg Zolotov Yulia Romanovskaya Maria Knyazeva

Source: SoftwareX, Vol 16, Iss , Pp 100885- (2021)

Subject Terms: Python package, FIRI model, D-region, Lower ionosphere of the Earth, Computer software, QA76.75-76.765

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2352711021001461; https://doaj.org/toc/2352-7110

Access URL: https://doaj.org/article/5a9386a5e89642a08e63dc3a4518cb41

PyThea: An open-source software package to perform 3D reconstruction of coronal mass ejections and shock waves

Authors: Kouloumvakos, Athanasios Rodríguez-García, Laura Gieseler, Jan et al.

Contributors: Kouloumvakos, Athanasios Rodríguez-García, Laura Gieseler, Jan et al.

Source: Frontiers in Astronomy and Space Sciences, Vol 9 (2022)
Frontiers in Astronomy and Space Sciences

Subject Terms: python software package, shock wave, ta115, heliophysics, remote-sensing solar observations, QC801-809, solar corona, Astronomy, Geophysics. Cosmic physics, Astronomy, Space science, QB1-991, 01 natural sciences, 0103 physical sciences, coronal mass ejection

File Description: application/pdf

Access URL: https://doaj.org/article/d737967c304542a9b50cffcef31a609a
http://hdl.handle.net/10138/352960

Pycheron: A Python Software Package for Waveform QC

Authors: Katherine Aur

Source: Proposed for presentation at the Nuclear Explosion Monitoring (NEM) Program Review Meeting held March 15 - February 19, 2021 in Virtual..

Development of a power flow software for distribution system analysis based on rectangular voltage using python software package

Authors: Lukmanul Hakim Muhamad Wahidi Trisno Handoko et al.

Source: 2014 6th International Conference on Information Technology and Electrical Engineering (ICITEE). :1-5

Subject Terms: 4. Education, 0211 other engineering and technologies, 0202 electrical engineering, electronic engineering, information engineering, 02 engineering and technology

rcsb-api: Python Toolkit for Streamlining Access to RCSB Protein Data Bank APIs.

Authors: Piehl DW Vallat B Truong I et al.

Source: Journal of molecular biology [J Mol Biol] 2025 Aug 01; Vol. 437 (15), pp. 168970. Date of Electronic Publication: 2025 Jan 31.

Publication Type: Journal Article

Journal Info: Publisher: Elsevier Country of Publication: Netherlands NLM ID: 2985088R Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1089-8638 (Electronic) Linking ISSN: 00222836 NLM ISO Abbreviation: J Mol Biol Subsets: MEDLINE

MeSH Terms: Databases, Protein* , Software* , Proteins*/chemistry , Computational Biology*/methods, Protein Conformation ; Models, Molecular ; User-Computer Interface ; Internet

pySBeLT: A Python software package for stochastic sediment transport under rarefied conditions

Authors: Sarah Zwiep Shawn M. Chartrand

Source: Journal of Open Source Software. 7:4282

Subject Terms: 0103 physical sciences, 01 natural sciences, 0105 earth and related environmental sciences

GWpy: A Python package for gravitational-wave astrophysics

Authors: Duncan M. Macleod Joseph S. Areeda Scott B. Coughlin et al.

Source: SoftwareX, Vol 13, Iss , Pp 100657- (2021)

Subject Terms: Gravitational waves, Python, Software, Computer software, QA76.75-76.765

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2352711021000029; https://doaj.org/toc/2352-7110

Access URL: https://doaj.org/article/414aa78013d84e31bc15d003f149e96b

multiflexxlib: A Python package for data reduction and visualization for the cold-neutron multi energy wide angle analyzer MultiFLEXX

Authors: Meng, S. Toft Petersen, R. Hao, L. et al.

Source: SoftwareX, Vol 7, Iss, Pp 309-312 (2018)
Meng, S, Toft-Petersen, R, Hao, L & Habicht, K 2018, ' multiflexxlib: A Python package for data reduction and visualization for the cold-neutron multi energy wide angle analyzer MultiFLEXX ', SoftwareX, vol. 7, pp. 309-312 . https://doi.org/10.1016/j.softx.2018.09.006
SoftwareX 7 2018, p. 309 312

Subject Terms: Three-axis spectroscopy, 0301 basic medicine, QA76.75-76.765, 03 medical and health sciences, 0302 clinical medicine, no topic specified, Visualization tool, Computer software, Inelastic neutron scattering, 3. Good health

File Description: application/pdf

Access URL: https://doaj.org/article/401b464610c24fa9ab7430115b387ea5
https://orbit.dtu.dk/en/publications/9dd51971-1158-48c6-9098-4c45906e4c72
https://www.helmholtz-berlin.de/pubbin/oai_publication?VT=1&ID=98574

A Python diagnostics package for evaluation of MJO-Teleconnections in S2S forecast systems

Authors: Cristiana Stan Saisri Kollapaneni Andrea Jenney et al.

Source: eISSN

File Description: application/pdf

Access URL: https://egusphere.copernicus.org/preprints/2025/egusphere-2025-1142/

Machine learning: Python tools for studying biomolecules and drug design.

Authors: Ryzhkov FV Ryzhkova YE Elinson MN

Source: Molecular diversity [Mol Divers] 2025 Aug; Vol. 29 (4), pp. 3789-3824. Date of Electronic Publication: 2025 Apr 29.

Publication Type: Journal Article; Review

Journal Info: Publisher: ESCOM Science Publishers Country of Publication: Netherlands NLM ID: 9516534 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1573-501X (Electronic) Linking ISSN: 13811991 NLM ISO Abbreviation: Mol Divers Subsets: MEDLINE

MeSH Terms: Machine Learning* , Drug Design* , Programming Languages* , Software*, Drug Discovery/methods ; Computational Biology/methods ; Humans

ModeHunter: A Package for the Reductionist Analysis, Animation, and Application of Elastic Biomolecular Motion

Authors: Willy Wriggers Maytha Alshammari Joseph N. Stember et al.

Source: The Journal of Physical Chemistry B. 129:825-834

Subject Terms: Motion, Molecular Dynamics Simulation, Software, Elasticity

Access URL: https://pubmed.ncbi.nlm.nih.gov/39791554

FinTDA: Python package for estimating market change through persistent homology diagrams

Authors: Gobato Souto, Hugo, Student Moradi, Amir, Onderzoeker Baris, Ismail et al.

Contributors: Gobato Souto, Hugo, Student Moradi, Amir, Onderzoeker Baris, Ismail et al.

Source: Software Impacts, 100637.

Subject Terms: Stock realized volatility, Portfolio Management, persistent homology, Python

Access URL: https://surfsharekit.nl/public/ae35513c-3203-4e69-80bf-414dd0fbc122

Availability: http://www.hbo-kennisbank.nl/en/page/hborecord.view/?uploadId=sharekit_han:oai:surfsharekit.nl:ae35513c-3203-4e69-80bf-414dd0fbc122