Search Results - Protein Array Analysis/methods

On-Array Citrullination of Protein Microarrays

Authors: Skallerup, Jacob Poulsen, Thomas B G Stensballe, Allan et al.

Contributors: Skallerup, Jacob Poulsen, Thomas B G Stensballe, Allan et al.

Source: Methods in Molecular Biology ISBN: 9781071645949
Skallerup, J, Poulsen, T B G & Stensballe, A 2025, On-Array Citrullination of Protein Microarrays. in C Ruiz-Romero, L Lourido & V Calamia (eds), Protein Arrays : Methods and Protocols. Springer, Methods in Molecular Biology, vol. 2929, pp. 43-52. https://doi.org/10.1007/978-1-0716-4595-6_4

Subject Terms: Anti-citrullinated protein antibody (ACPA), Citrulline/metabolism, Arthritis, Rheumatoid/immunology, Protein-Arginine Deiminases/metabolism, Protein microarray, Microarray, Autoantigens/immunology, Neo-antigen, Peptidylarginine deiminase (PAD), Neo-autoantigen, Humans, Protein Array Analysis/methods, Citrulline, Citrullination, Autoantibody profiling, Rheumatoid arthritis, Protein Processing, Post-Translational, Autoantibodies/immunology

Access URL: https://vbn.aau.dk/da/publications/64ab4619-963d-43a2-bf8a-837a627d464f
http://www.scopus.com/inward/record.url?scp=105010288007&partnerID=8YFLogxK
https://doi.org/10.1007/978-1-0716-4595-6_4

Postmortem Interval Estimation Using Protein Chip Technology Combined with Multivariate Analysis Methods.

Authors: Zhang XD Jiang YR Liang XR et al.

Source: Fa yi xue za zhi [Fa Yi Xue Za Zhi] 2023 Apr 25; Vol. 39 (2), pp. 115-120.

Publication Type: Journal Article

Journal Info: Publisher: Si fa bu si fa jian ding ke xue yan jiu yuan Country of Publication: China NLM ID: 9426151 Publication Model: Print Cited Medium: Internet ISSN: 1004-5619 (Print) Linking ISSN: 10045619 NLM ISO Abbreviation: Fa Yi Xue Za Zhi Subsets: MEDLINE

MeSH Terms: Postmortem Changes* , Protein Array Analysis*, Animals ; Humans ; Rats ; Multivariate Analysis ; Technology

Nucleic Acid Programmable Protein Arrays for Autoantibody Discovery: A Step-by-Step Guide.

Authors: Warnakulasuriya K Song L LaBaer J

Source: Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2026; Vol. 2980, pp. 387-400.

Publication Type: Journal Article

Journal Info: Publisher: Humana Press Country of Publication: United States NLM ID: 9214969 Publication Model: Print Cited Medium: Internet ISSN: 1940-6029 (Electronic) Linking ISSN: 10643745 NLM ISO Abbreviation: Methods Mol Biol Subsets: MEDLINE

MeSH Terms: Protein Array Analysis*/methods , Autoantibodies*/immunology , Autoantibodies*/analysis , Nucleic Acids*, Humans ; Biomarkers

Analysis method of cellular stress caused by intermediate dose‐rate irradiation using a cell lysate array technique.

Authors: Morishima, Nobuhiro Ogata, Hiromitsu Magae, Junji et al.

Source: Genes to Cells; Apr2023, Vol. 28 Issue 4, p288-306, 19p

Subject Terms: TISSUE arrays, CELL analysis, CELL physiology, BIOMOLECULES, PROTEIN microarrays, DNA damage

Analysis method of cellular stress caused by intermediate dose‐rate irradiation using a cell lysate array technique

Authors: Nobuhiro Morishima Hiromitsu Ogata Junji Magae et al.

Source: Genes to Cells. 28:288-306

Subject Terms: 0301 basic medicine, 0303 health sciences, 03 medical and health sciences, Gamma Rays, Cell Differentiation, Reactive Oxygen Species, Cellular Senescence, DNA Damage

Access URL: https://pubmed.ncbi.nlm.nih.gov/36788710

BAPCP: A comprehensive and user-friendly web tool for identifying biomarkers from protein microarray technologies.

Authors: Yang TH Syu GD Chen CS et al.

Source: Computer methods and programs in biomedicine [Comput Methods Programs Biomed] 2024 Sep; Vol. 254, pp. 108260. Date of Electronic Publication: 2024 May 31.

Publication Type: Journal Article

Journal Info: Publisher: Elsevier Scientific Publishers Country of Publication: Ireland NLM ID: 8506513 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1872-7565 (Electronic) Linking ISSN: 01692607 NLM ISO Abbreviation: Comput Methods Programs Biomed Subsets: MEDLINE

MeSH Terms: Biomarkers*/metabolism , Protein Array Analysis* , Software*, Humans ; Internet ; Proteome ; User-Computer Interface ; Escherichia coli ; Proteomics/methods ; Computational Biology

Protein Microarray Analysis with GenePix.

Authors: Barderas R Montero-Calle A San Segundo-Acosta P

Source: Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2025; Vol. 2929, pp. 85-95.

Publication Type: Journal Article

Journal Info: Publisher: Humana Press Country of Publication: United States NLM ID: 9214969 Publication Model: Print Cited Medium: Internet ISSN: 1940-6029 (Electronic) Linking ISSN: 10643745 NLM ISO Abbreviation: Methods Mol Biol Subsets: MEDLINE

MeSH Terms: Protein Array Analysis*/methods , Protein Array Analysis*/instrumentation , Proteomics*/methods , Software*, Humans

A Concentration-Dependent Analysis Method for High Density Protein Microarrays

Authors: Melinda Biernacki Catherine J. Wu Vladimir Brusic et al.

Source: Journal of Proteome Research. 7:2059-2068

Subject Terms: 0301 basic medicine, 0303 health sciences, Gene Expression Profiling, Statistics as Topic, Protein Array Analysis, Computational Biology, Reproducibility of Results, Leukemia, Lymphocytic, Chronic, B-Cell, 3. Good health, 03 medical and health sciences, Leukemia, Myelogenous, Chronic, BCR-ABL Positive, Humans, Antigens, Algorithms

Access URL: https://pubmed.ncbi.nlm.nih.gov/18393456
https://europepmc.org/article/MED/18393456
https://pubs.acs.org/doi/abs/10.1021/pr700892h
https://research.nu.edu.kz/en/publications/a-concentration-dependent-analysis-method-for-high-density-protei
https://www.ncbi.nlm.nih.gov/pubmed/18393456
http://pubs.acs.org/doi/abs/10.1021/pr700892h

Unravelling Immunogenic Cell Death Mechanisms by Functional Proteomics Arrays.

Authors: Nuño-Soriano A Arias-Hidalgo C Juanes-Velasco P et al.

Source: Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2025; Vol. 2929, pp. 215-226.

Publication Type: Journal Article

Journal Info: Publisher: Humana Press Country of Publication: United States NLM ID: 9214969 Publication Model: Print Cited Medium: Internet ISSN: 1940-6029 (Electronic) Linking ISSN: 10643745 NLM ISO Abbreviation: Methods Mol Biol Subsets: MEDLINE

MeSH Terms: Protein Array Analysis*/methods , Proteomics*/methods , Immunogenic Cell Death*, Humans ; Endoplasmic Reticulum Stress ; Signal Transduction

Quantum-enhanced imaging with SPAD array cameras

Authors: Camphausen, Robin

Contributors: University/Department: Universitat Politècnica de Catalunya. Institut de Ciències Fotòniques

Thesis Advisors: Pruneri, Valerio

Source: TDX (Tesis Doctorals en Xarxa)

Subject Terms: Àrees temàtiques de la UPC::Física

File Description: application/pdf

Access URL: http://hdl.handle.net/10803/688566
https://dx.doi.org/10.5821/dissertation-2117-389981

Cytokine Antibody Microarray-Based Proteomic Strategies for Characterizing the Dysregulation of Cytokines Disease-Specific.

Authors: Barderas R San Segundo-Acosta P Montero-Calle A

Source: Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2025; Vol. 2929, pp. 195-213.

Publication Type: Journal Article

Journal Info: Publisher: Humana Press Country of Publication: United States NLM ID: 9214969 Publication Model: Print Cited Medium: Internet ISSN: 1940-6029 (Electronic) Linking ISSN: 10643745 NLM ISO Abbreviation: Methods Mol Biol Subsets: MEDLINE

MeSH Terms: Proteomics*/methods , Protein Array Analysis*/methods , Cytokines*/metabolism , Cytokines*/immunology , Antibodies*/immunology, Humans ; Biomarkers

Inter-tissue glycan heterogeneity: site-specific glycoform analysis of mouse tissue N-glycoproteomes using MS1-based glycopeptide detection method assisted by lectin microarray.

Authors: Nagai-Okatani C Tomioka A Tominaga D et al.

Source: Analytical and bioanalytical chemistry [Anal Bioanal Chem] 2025 Feb; Vol. 417 (5), pp. 973-988. Date of Electronic Publication: 2024 Dec 16.

Publication Type: Journal Article

Journal Info: Publisher: Springer-Verlag Country of Publication: Germany NLM ID: 101134327 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1618-2650 (Electronic) Linking ISSN: 16182642 NLM ISO Abbreviation: Anal Bioanal Chem Subsets: MEDLINE

MeSH Terms: Glycopeptides*/analysis , Glycopeptides*/chemistry , Polysaccharides*/analysis , Polysaccharides*/chemistry , Lectins*/chemistry , Glycoproteins*/chemistry , Glycoproteins*/analysis , Protein Array Analysis*/methods , Proteome*, Animals ; Mice ; Glycosylation ; Male ; Proteomics/methods ; Tandem Mass Spectrometry/methods

An integrated approach based on multiplexed protein array and iTRAQ labeling for in-depth identification of pathways associated to IVF outcome

Authors: Severino, Valeria Malorni, Livia Cicatiello, Anna Emilia et al.

Source: ISSN: 1932-6203 ; PloS one, vol. 8, no. 10 (2013) e77303.

Subject Terms: info:eu-repo/classification/ddc/576, info:eu-repo/classification/ddc/616, Computational Biology, Cross-Sectional Studies, Cytokines/metabolism, Female, Fertilization in Vitro, Follicular Fluid/metabolism, Humans, Intercellular Signaling Peptides and Proteins/metabolism, Oocytes/metabolism, Pregnancy, Pregnancy Outcome, Protein Array Analysis/methods, Proteome, Proteomics/methods, Reproducibility of Results, Signal Transduction

Relation: info:eu-repo/semantics/altIdentifier/pmid/24146976; unige:41738

Availability: https://archive-ouverte.unige.ch/unige:41738

Microarray based on autodisplayed Ro proteins for medical diagnosis of systemic lupus erythematosus (SLE)

Authors: Jae Chul Pyun Ji Hong Bong Joachim Jose et al.

Contributors: Jae Chul Pyun Ji Hong Bong Joachim Jose et al.

Source: Biosensors and Bioelectronics. 57:213-218

Subject Terms: abbits, Cells, Escherichia coli/chemistry, Fluoroimmunoassay, Protein Array Analysis, Autodisplay, Biosensing Techniques, 02 engineering and technology, Microarray, Ro-protein, Sensitivity and Specificity, 01 natural sciences, Fluoroimmunoassay/methods, Fluorescence immunoassay, Protein Array Analysis/methods, Escherichia coli, Animals, Humans, Lupus Erythematosus, Systemic, Autoantibodies, Immobilized/chemistry, Lupus Erythematosus, Cells, Immobilized, 0104 chemical sciences, 3. Good health, Ribonucleoproteins, Autoantibodies/analysis, Systemic/diagnosis, Ribonucleoproteins/immunology, Systemic lupus erythematosus (SLE), Biosensing Techniques/methods, Rabbits, 0210 nano-technology, Autoimmune

Access URL: https://pubmed.ncbi.nlm.nih.gov/24583694
https://www.sciencedirect.com/science/article/pii/S0956566314000967
https://yonsei.pure.elsevier.com/en/publications/microarray-based-on-autodisplayed-ro-proteins-for-medical-diagnos
https://www.ncbi.nlm.nih.gov/pubmed/24583694
http://www.sciencedirect.com/science/article/pii/S0956566314000967
https://ir.ymlib.yonsei.ac.kr/handle/22282913/158556

Lab-in-a-Tip: a multiplex immunoassay platform based on a self-assembled barcoded protein array.

Authors: He, Yiran Jiang, Min Liang, Zhenlong et al.

Source: Nature Communications; 4/29/2025, Vol. 16 Issue 1, p1-14, 14p

Subject Terms: RAPID diagnostic tests, CLINICAL medicine, IMMUNOASSAY, ROBOTICS, PIPETTES

Protein Microarray-Based Proteomics for Disease Analysis.

Authors: Barderas R Srivastava S LaBaer J

Source: Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2021; Vol. 2344, pp. 3-6.

Publication Type: Journal Article

Journal Info: Publisher: Humana Press Country of Publication: United States NLM ID: 9214969 Publication Model: Print Cited Medium: Internet ISSN: 1940-6029 (Electronic) Linking ISSN: 10643745 NLM ISO Abbreviation: Methods Mol Biol Subsets: MEDLINE

MeSH Terms: Protein Array Analysis* , Proteomics*, Communicable Diseases/*diagnosis , Proteins/*analysis, Humans

Generation of Arabidopsis protein chips for antibody and serum screening

Authors: Kersten, B. Feilner, T. Kramer, A. et al.

Source: Plant Molecular Biology. 52:999-1010

Subject Terms: Arabidopsis/genetics/immunology/*metabolism, Electrophoresis, Polyacrylamide Gel, DNA, Complementary, Immune Sera/immunology, Arabidopsis Proteins, Immune Sera, Recombinant Proteins/genetics/immunology/metabolism, Arabidopsis, Protein Array Analysis, Molecular, DNA, Complementary/genetics, Recombinant Proteins, Rats, Arabidopsis Proteins/genetics/immunology/*metabolism, Escherichia coli/genetics, Protein Array Analysis/*methods, Escherichia coli, Animals, Electrophoresis, Polyacrylamide Gel, Rabbits, Cloning, Molecular, Cloning

Access URL: https://pubmed.ncbi.nlm.nih.gov/14558660
https://pubmed.ncbi.nlm.nih.gov/14558660/
https://www.ncbi.nlm.nih.gov/pubmed/14558660
https://link.springer.com/article/10.1023/A:1025424814739
https://ipmb.sinica.edu.tw/microarray/oldweb/protein/P41.pdf
http://pubman.mpdl.mpg.de/pubman/item/escidoc:1586101
http://ipmb.sinica.edu.tw/microarray/oldweb/protein/P41.pdf

A Novel Ergodic Cellular Automaton Model of Gene-Protein Network: Theoretical Nonlinear Analyses and Efficient FPGA Implementation

Authors: Shogo Shirafuji Hiroyuki Torikai

Source: IEEE Access, Vol 11, Pp 300-312 (2023)

Subject Terms: Gene-protein network, cellular automaton, nonlinear dynamics bifurcation phenomena, field programmable gate array, Electrical engineering. Electronics. Nuclear engineering, TK1-9971

File Description: electronic resource

Relation: https://ieeexplore.ieee.org/document/9998543/; https://doaj.org/toc/2169-3536

Access URL: https://doaj.org/article/f0b87e6cfba049cb965df31e6c4bbbd1

Discovery of Immune Reactive Human Proteins by High-Density Protein Arrays and Customized Validation of Potential Biomarkers by ELISA.

Authors: Sigdel TK Sarwal MM

Source: Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2018; Vol. 1788, pp. 11-21.

Publication Type: Journal Article

Journal Info: Publisher: Humana Press Country of Publication: United States NLM ID: 9214969 Publication Model: Print Cited Medium: Internet ISSN: 1940-6029 (Electronic) Linking ISSN: 10643745 NLM ISO Abbreviation: Methods Mol Biol Subsets: MEDLINE

MeSH Terms: Antibodies/*blood , Protein Array Analysis/*methods , Proteomics/*methods, Biomarkers/blood ; Enzyme-Linked Immunosorbent Assay/instrumentation ; Enzyme-Linked Immunosorbent Assay/methods ; Equipment Design ; Humans ; Protein Array Analysis/instrumentation ; Proteomics/instrumentation

Proteomic analysis using protein chips to detect biomarkers in cervical and amniotic fluid in women with intra-amniotic inflammation

Authors: Rüetschi, Ulla Rosen, Åsa Karlsson, Gösta et al.

Source: J Proteome Res. 4(6):2236-42

Subject Terms: Medical and Health Sciences, Medicin och hälsovetenskap, Amniocentesis, Amnion/metabolism, Amniotic Fluid/chemistry/*metabolism, Biological Markers/*chemistry, Calgranulin A/metabolism, Calgranulin B/metabolism, Cervix Uteri/metabolism, Female, Fetal Membranes, Premature Rupture, *Gene Expression Regulation, Humans, Inflammation/*diagnosis, Mass Spectrometry, Neutrophils/metabolism, Obstetric Labor, Premature, Pregnancy, Pregnancy Complications, Premature Birth/*diagnosis/*metabolism, Protein Array Analysis/*methods, Proteins/chemistry, Proteome/chemistry, Proteomics/*methods, Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization

Access URL: https://gup.ub.gu.se/publication/46734