Search Results - Protein Array Analysis/methods*

On-Array Citrullination of Protein Microarrays

Authors: Skallerup, Jacob Poulsen, Thomas B G Stensballe, Allan et al.

Contributors: Skallerup, Jacob Poulsen, Thomas B G Stensballe, Allan et al.

Source: Methods in Molecular Biology ISBN: 9781071645949
Skallerup, J, Poulsen, T B G & Stensballe, A 2025, On-Array Citrullination of Protein Microarrays. in C Ruiz-Romero, L Lourido & V Calamia (eds), Protein Arrays : Methods and Protocols. Springer, Methods in Molecular Biology, vol. 2929, pp. 43-52. https://doi.org/10.1007/978-1-0716-4595-6_4

Subject Terms: Anti-citrullinated protein antibody (ACPA), Citrulline/metabolism, Arthritis, Rheumatoid/immunology, Protein-Arginine Deiminases/metabolism, Protein microarray, Microarray, Autoantigens/immunology, Neo-antigen, Peptidylarginine deiminase (PAD), Neo-autoantigen, Humans, Protein Array Analysis/methods, Citrulline, Citrullination, Autoantibody profiling, Rheumatoid arthritis, Protein Processing, Post-Translational, Autoantibodies/immunology

Access URL: https://vbn.aau.dk/da/publications/64ab4619-963d-43a2-bf8a-837a627d464f
http://www.scopus.com/inward/record.url?scp=105010288007&partnerID=8YFLogxK
https://doi.org/10.1007/978-1-0716-4595-6_4

Postmortem Interval Estimation Using Protein Chip Technology Combined with Multivariate Analysis Methods.

Authors: Zhang XD Jiang YR Liang XR et al.

Source: Fa yi xue za zhi [Fa Yi Xue Za Zhi] 2023 Apr 25; Vol. 39 (2), pp. 115-120.

Publication Type: Journal Article

Journal Info: Publisher: Si fa bu si fa jian ding ke xue yan jiu yuan Country of Publication: China NLM ID: 9426151 Publication Model: Print Cited Medium: Internet ISSN: 1004-5619 (Print) Linking ISSN: 10045619 NLM ISO Abbreviation: Fa Yi Xue Za Zhi Subsets: MEDLINE

MeSH Terms: Postmortem Changes* , Protein Array Analysis*, Animals ; Humans ; Rats ; Multivariate Analysis ; Technology

Nucleic Acid Programmable Protein Arrays for Autoantibody Discovery: A Step-by-Step Guide.

Authors: Warnakulasuriya K Song L LaBaer J

Source: Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2026; Vol. 2980, pp. 387-400.

Publication Type: Journal Article

Journal Info: Publisher: Humana Press Country of Publication: United States NLM ID: 9214969 Publication Model: Print Cited Medium: Internet ISSN: 1940-6029 (Electronic) Linking ISSN: 10643745 NLM ISO Abbreviation: Methods Mol Biol Subsets: MEDLINE

MeSH Terms: Protein Array Analysis*/methods , Autoantibodies*/immunology , Autoantibodies*/analysis , Nucleic Acids*, Humans ; Biomarkers

BAPCP: A comprehensive and user-friendly web tool for identifying biomarkers from protein microarray technologies.

Authors: Yang TH Syu GD Chen CS et al.

Source: Computer methods and programs in biomedicine [Comput Methods Programs Biomed] 2024 Sep; Vol. 254, pp. 108260. Date of Electronic Publication: 2024 May 31.

Publication Type: Journal Article

Journal Info: Publisher: Elsevier Scientific Publishers Country of Publication: Ireland NLM ID: 8506513 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1872-7565 (Electronic) Linking ISSN: 01692607 NLM ISO Abbreviation: Comput Methods Programs Biomed Subsets: MEDLINE

MeSH Terms: Biomarkers*/metabolism , Protein Array Analysis* , Software*, Humans ; Internet ; Proteome ; User-Computer Interface ; Escherichia coli ; Proteomics/methods ; Computational Biology

Protein Microarray Analysis with GenePix.

Authors: Barderas R Montero-Calle A San Segundo-Acosta P

Source: Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2025; Vol. 2929, pp. 85-95.

Publication Type: Journal Article

Journal Info: Publisher: Humana Press Country of Publication: United States NLM ID: 9214969 Publication Model: Print Cited Medium: Internet ISSN: 1940-6029 (Electronic) Linking ISSN: 10643745 NLM ISO Abbreviation: Methods Mol Biol Subsets: MEDLINE

MeSH Terms: Protein Array Analysis*/methods , Protein Array Analysis*/instrumentation , Proteomics*/methods , Software*, Humans

Unravelling Immunogenic Cell Death Mechanisms by Functional Proteomics Arrays.

Authors: Nuño-Soriano A Arias-Hidalgo C Juanes-Velasco P et al.

Source: Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2025; Vol. 2929, pp. 215-226.

Publication Type: Journal Article

Journal Info: Publisher: Humana Press Country of Publication: United States NLM ID: 9214969 Publication Model: Print Cited Medium: Internet ISSN: 1940-6029 (Electronic) Linking ISSN: 10643745 NLM ISO Abbreviation: Methods Mol Biol Subsets: MEDLINE

MeSH Terms: Protein Array Analysis*/methods , Proteomics*/methods , Immunogenic Cell Death*, Humans ; Endoplasmic Reticulum Stress ; Signal Transduction

Quantum-enhanced imaging with SPAD array cameras

Authors: Camphausen, Robin

Contributors: University/Department: Universitat Politècnica de Catalunya. Institut de Ciències Fotòniques

Thesis Advisors: Pruneri, Valerio

Source: TDX (Tesis Doctorals en Xarxa)

Subject Terms: Àrees temàtiques de la UPC::Física

File Description: application/pdf

Access URL: http://hdl.handle.net/10803/688566
https://dx.doi.org/10.5821/dissertation-2117-389981

Cytokine Antibody Microarray-Based Proteomic Strategies for Characterizing the Dysregulation of Cytokines Disease-Specific.

Authors: Barderas R San Segundo-Acosta P Montero-Calle A

Source: Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2025; Vol. 2929, pp. 195-213.

Publication Type: Journal Article

Journal Info: Publisher: Humana Press Country of Publication: United States NLM ID: 9214969 Publication Model: Print Cited Medium: Internet ISSN: 1940-6029 (Electronic) Linking ISSN: 10643745 NLM ISO Abbreviation: Methods Mol Biol Subsets: MEDLINE

MeSH Terms: Proteomics*/methods , Protein Array Analysis*/methods , Cytokines*/metabolism , Cytokines*/immunology , Antibodies*/immunology, Humans ; Biomarkers

An integrated approach based on multiplexed protein array and iTRAQ labeling for in-depth identification of pathways associated to IVF outcome

Authors: Severino, Valeria Malorni, Livia Cicatiello, Anna Emilia et al.

Source: ISSN: 1932-6203 ; PloS one, vol. 8, no. 10 (2013) e77303.

Subject Terms: info:eu-repo/classification/ddc/576, info:eu-repo/classification/ddc/616, Computational Biology, Cross-Sectional Studies, Cytokines/metabolism, Female, Fertilization in Vitro, Follicular Fluid/metabolism, Humans, Intercellular Signaling Peptides and Proteins/metabolism, Oocytes/metabolism, Pregnancy, Pregnancy Outcome, Protein Array Analysis/methods, Proteome, Proteomics/methods, Reproducibility of Results, Signal Transduction

Relation: info:eu-repo/semantics/altIdentifier/pmid/24146976; unige:41738

Availability: https://archive-ouverte.unige.ch/unige:41738

Microarray based on autodisplayed Ro proteins for medical diagnosis of systemic lupus erythematosus (SLE)

Authors: Jae Chul Pyun Ji Hong Bong Joachim Jose et al.

Contributors: Jae Chul Pyun Ji Hong Bong Joachim Jose et al.

Source: Biosensors and Bioelectronics. 57:213-218

Subject Terms: abbits, Cells, Escherichia coli/chemistry, Fluoroimmunoassay, Protein Array Analysis, Autodisplay, Biosensing Techniques, 02 engineering and technology, Microarray, Ro-protein, Sensitivity and Specificity, 01 natural sciences, Fluoroimmunoassay/methods, Fluorescence immunoassay, Protein Array Analysis/methods, Escherichia coli, Animals, Humans, Lupus Erythematosus, Systemic, Autoantibodies, Immobilized/chemistry, Lupus Erythematosus, Cells, Immobilized, 0104 chemical sciences, 3. Good health, Ribonucleoproteins, Autoantibodies/analysis, Systemic/diagnosis, Ribonucleoproteins/immunology, Systemic lupus erythematosus (SLE), Biosensing Techniques/methods, Rabbits, 0210 nano-technology, Autoimmune

Access URL: https://pubmed.ncbi.nlm.nih.gov/24583694
https://www.sciencedirect.com/science/article/pii/S0956566314000967
https://yonsei.pure.elsevier.com/en/publications/microarray-based-on-autodisplayed-ro-proteins-for-medical-diagnos
https://www.ncbi.nlm.nih.gov/pubmed/24583694
http://www.sciencedirect.com/science/article/pii/S0956566314000967
https://ir.ymlib.yonsei.ac.kr/handle/22282913/158556

Protein Microarray-Based Proteomics for Disease Analysis.

Authors: Barderas R Srivastava S LaBaer J

Source: Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2021; Vol. 2344, pp. 3-6.

Publication Type: Journal Article

Journal Info: Publisher: Humana Press Country of Publication: United States NLM ID: 9214969 Publication Model: Print Cited Medium: Internet ISSN: 1940-6029 (Electronic) Linking ISSN: 10643745 NLM ISO Abbreviation: Methods Mol Biol Subsets: MEDLINE

MeSH Terms: Protein Array Analysis* , Proteomics*, Communicable Diseases/*diagnosis , Proteins/*analysis, Humans

Generation of Arabidopsis protein chips for antibody and serum screening

Authors: Kersten, B. Feilner, T. Kramer, A. et al.

Source: Plant Molecular Biology. 52:999-1010

Subject Terms: Arabidopsis/genetics/immunology/*metabolism, Electrophoresis, Polyacrylamide Gel, DNA, Complementary, Immune Sera/immunology, Arabidopsis Proteins, Immune Sera, Recombinant Proteins/genetics/immunology/metabolism, Arabidopsis, Protein Array Analysis, Molecular, DNA, Complementary/genetics, Recombinant Proteins, Rats, Arabidopsis Proteins/genetics/immunology/*metabolism, Escherichia coli/genetics, Protein Array Analysis/*methods, Escherichia coli, Animals, Electrophoresis, Polyacrylamide Gel, Rabbits, Cloning, Molecular, Cloning

Access URL: https://pubmed.ncbi.nlm.nih.gov/14558660
https://pubmed.ncbi.nlm.nih.gov/14558660/
https://www.ncbi.nlm.nih.gov/pubmed/14558660
https://link.springer.com/article/10.1023/A:1025424814739
https://ipmb.sinica.edu.tw/microarray/oldweb/protein/P41.pdf
http://pubman.mpdl.mpg.de/pubman/item/escidoc:1586101
http://ipmb.sinica.edu.tw/microarray/oldweb/protein/P41.pdf

A Novel Ergodic Cellular Automaton Model of Gene-Protein Network: Theoretical Nonlinear Analyses and Efficient FPGA Implementation

Authors: Shogo Shirafuji Hiroyuki Torikai

Source: IEEE Access, Vol 11, Pp 300-312 (2023)

Subject Terms: Gene-protein network, cellular automaton, nonlinear dynamics bifurcation phenomena, field programmable gate array, Electrical engineering. Electronics. Nuclear engineering, TK1-9971

File Description: electronic resource

Relation: https://ieeexplore.ieee.org/document/9998543/; https://doaj.org/toc/2169-3536

Access URL: https://doaj.org/article/f0b87e6cfba049cb965df31e6c4bbbd1

Discovery of Immune Reactive Human Proteins by High-Density Protein Arrays and Customized Validation of Potential Biomarkers by ELISA.

Authors: Sigdel TK Sarwal MM

Source: Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2018; Vol. 1788, pp. 11-21.

Publication Type: Journal Article

Journal Info: Publisher: Humana Press Country of Publication: United States NLM ID: 9214969 Publication Model: Print Cited Medium: Internet ISSN: 1940-6029 (Electronic) Linking ISSN: 10643745 NLM ISO Abbreviation: Methods Mol Biol Subsets: MEDLINE

MeSH Terms: Antibodies/*blood , Protein Array Analysis/*methods , Proteomics/*methods, Biomarkers/blood ; Enzyme-Linked Immunosorbent Assay/instrumentation ; Enzyme-Linked Immunosorbent Assay/methods ; Equipment Design ; Humans ; Protein Array Analysis/instrumentation ; Proteomics/instrumentation

Proteomic analysis using protein chips to detect biomarkers in cervical and amniotic fluid in women with intra-amniotic inflammation

Authors: Rüetschi, Ulla Rosen, Åsa Karlsson, Gösta et al.

Source: J Proteome Res. 4(6):2236-42

Subject Terms: Medical and Health Sciences, Medicin och hälsovetenskap, Amniocentesis, Amnion/metabolism, Amniotic Fluid/chemistry/*metabolism, Biological Markers/*chemistry, Calgranulin A/metabolism, Calgranulin B/metabolism, Cervix Uteri/metabolism, Female, Fetal Membranes, Premature Rupture, *Gene Expression Regulation, Humans, Inflammation/*diagnosis, Mass Spectrometry, Neutrophils/metabolism, Obstetric Labor, Premature, Pregnancy, Pregnancy Complications, Premature Birth/*diagnosis/*metabolism, Protein Array Analysis/*methods, Proteins/chemistry, Proteome/chemistry, Proteomics/*methods, Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization

Access URL: https://gup.ub.gu.se/publication/46734

Discovery and Customized Validation of Antibody Targets by Protein Arrays and Indirect ELISA

Authors: Sigdel, Tara K Sarwal, Minnie M

Subject Terms: Biological Sciences, Bioinformatics and Computational Biology, Biotechnology, Genetics, Human Genome, Generic health relevance, Antibodies, Biomarkers, Enzyme-Linked Immunosorbent Assay, Genome, Human, Humans, Protein Array Analysis, Small Molecule Libraries, Other Chemical Sciences, Biochemistry and Cell Biology, Developmental Biology, Biochemistry and cell biology, Medicinal and biomolecular chemistry

File Description: application/pdf

Access URL: https://escholarship.org/uc/item/7kd375gc
https://escholarship.org/content/qt7kd375gc/qt7kd375gc.pdf

Controlling technical variation amongst 6693 patient microarrays of the randomized MINDACT trial.

Authors: Jacob, L. Witteveen, A. Beumer, I. et al.

Subject Terms: Adult, Aged, Biomarkers, Tumor/genetics, Breast Neoplasms/genetics, Female, Gene Expression Regulation, Neoplastic/genetics, Humans, Middle Aged, Neoplasm Proteins/genetics, Prognosis, Protein Array Analysis/methods, Randomized Controlled Trials as Topic, Transcriptome

File Description: application/pdf

Relation: Communications Biology; https://iris.unil.ch/handle/iris/142898; serval:BIB_675A859CA6A3; 000556316100002

Availability: https://iris.unil.ch/handle/iris/142898
https://doi.org/10.1038/s42003-020-1111-1

Analysis method of cellular stress caused by intermediate dose‐rate irradiation using a cell lysate array technique.

Authors: Morishima, Nobuhiro Ogata, Hiromitsu Magae, Junji et al.

Source: Genes to Cells; Apr2023, Vol. 28 Issue 4, p288-306, 19p

Subject Terms: TISSUE arrays, CELL analysis, CELL physiology, BIOMOLECULES, PROTEIN microarrays, DNA damage

Spot the Difference - Development of a Syndrome Based Protein Microarray for Specific Serological Detection of Multiple Flavivirus Infections in Travelers

Authors: Cleton, Natalie B. Godeke, Gert-Jan Reimerink, Johan et al.

Subject Terms: Humans, Female, Male, Middle Aged, Cross Reactions, Antibodies Viral/blood, Travel, Epitopes, Flavivirus Infections/diagnosis, Protein Array Analysis/methods, Viral Nonstructural Proteins/genetics, Viral Nonstructural Proteins/immunology, 610 Medizin, ddc:610

File Description: application/pdf

Relation: http://edoc.rki.de/oa/articles/reh38Kk1kzrjM/PDF/27P0kYj4YAUwc.pdf; http://edoc.rki.de/176904/2060; http://dx.doi.org/10.25646/1985

Availability: http://edoc.rki.de/oa/articles/reh38Kk1kzrjM/PDF/27P0kYj4YAUwc.pdf
http://edoc.rki.de/176904/2060
https://nbn-resolving.org/urn:nbn:de:0257-10039441
https://doi.org/10.1371/journal.pntd.0003580
https://doi.org/10.25646/1985

Protein-binding microarrays: probing disease markers at the interface of proteomics and genomics.

Authors: Kerschgens, J. Egener-Kuhn, T. Mermod, N.

Subject Terms: Animals, Biological Markers/chemistry, Communicable Diseases/genetics, Communicable Diseases/metabolism, DNA/genetics, DNA/metabolism, DNA-Binding Proteins/chemistry, DNA-Binding Proteins/genetics, Genomics, Humans, Neoplasms/genetics, Neoplasms/metabolism, Protein Array Analysis/methods, Protein Binding, Proteomics

Relation: Trends in Molecular Medicine; 1471-499X[electronic], 1471-4914[linking]; https://iris.unil.ch/handle/iris/226766; serval:BIB_A3424A57C803; 000269868400003

Availability: https://iris.unil.ch/handle/iris/226766
https://doi.org/10.1016/j.molmed.2009.06.004