Search Results - (( (stateni OR (statne OR statne)) python code analysis ) OR ( stat python code analysis ))~

GE-IA-NAM: gene-environment interaction analysis via imaging-assisted neural additive model.

Authors: Li J Xu Y Ma S et al.

Source: Bioinformatics (Oxford, England) [Bioinformatics] 2025 Sep 01; Vol. 41 (9).

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium: Internet ISSN: 1367-4811 (Electronic) Linking ISSN: 13674803 NLM ISO Abbreviation: Bioinformatics Subsets: MEDLINE

MeSH Terms: Gene-Environment Interaction* , Deep Learning* , Lung Neoplasms*/genetics , Skin Neoplasms*/genetics , Melanoma*/genetics, Datasets as Topic ; Humans ; Age Factors ; Sex Factors ; Smoking

Extended sample size calculations for evaluation of prediction models using a threshold for classification.

Authors: Whittle R Ensor J Archer L et al.

Source: BMC medical research methodology [BMC Med Res Methodol] 2025 Jul 01; Vol. 25 (1), pp. 170. Date of Electronic Publication: 2025 Jul 01.

Publication Type: Journal Article

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 100968545 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2288 (Electronic) Linking ISSN: 14712288 NLM ISO Abbreviation: BMC Med Res Methodol Subsets: MEDLINE

MeSH Terms: Models, Statistical*, Sample Size ; Humans ; Predictive Value of Tests ; Risk Assessment/methods ; Sensitivity and Specificity ; Algorithms

Prediction of Chemically Modified Antimicrobial Peptides and Their Sub-functional Activities Using Hybrid Features.

Authors: Yao Y Zhang D Fan H et al.

Source: Probiotics and antimicrobial proteins [Probiotics Antimicrob Proteins] 2025 May 21. Date of Electronic Publication: 2025 May 21.

Publication Type: Journal Article

Journal Info: Publisher: Springer Country of Publication: United States NLM ID: 101484100 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1867-1314 (Electronic) Linking ISSN: 18671306 NLM ISO Abbreviation: Probiotics Antimicrob Proteins Subsets: MEDLINE

Phenotype structuring in collective cell migration: a tutorial of mathematical models and methods.

Authors: Lorenzi T Painter KJ Villa C

Source: Journal of mathematical biology [J Math Biol] 2025 May 16; Vol. 90 (6), pp. 61. Date of Electronic Publication: 2025 May 16.

Publication Type: Journal Article; Review

Journal Info: Publisher: Springer Verlag Country of Publication: Germany NLM ID: 7502105 Publication Model: Electronic Cited Medium: Internet ISSN: 1432-1416 (Electronic) Linking ISSN: 03036812 NLM ISO Abbreviation: J Math Biol Subsets: MEDLINE

MeSH Terms: Cell Movement*/physiology , Models, Biological*, Phenotype ; Humans ; Mathematical Concepts ; Computer Simulation ; Animals ; Neoplasms/pathology

Quantifying the nuclear localization of fluorescently tagged proteins.

Authors: Hurbain J Ten Wolde PR Swain PS

Source: Bioinformatics advances [Bioinform Adv] 2025 May 12; Vol. 5 (1), pp. vbaf114. Date of Electronic Publication: 2025 May 12 (Print Publication: 2025).

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 9918282081306676 Publication Model: eCollection Cited Medium: Internet ISSN: 2635-0041 (Electronic) Linking ISSN: 26350041 NLM ISO Abbreviation: Bioinform Adv Subsets: PubMed not MEDLINE

Effects of a post-acute care management program on subsequent acute care utilization for hospitalized patients discharged to skilled nursing facilities.

Authors: Armstrong D Agovi AM Gehr AW et al.

Source: BMC health services research [BMC Health Serv Res] 2026 Jan 07. Date of Electronic Publication: 2026 Jan 07.

Publication Type: Journal Article

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 101088677 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1472-6963 (Electronic) Linking ISSN: 14726963 NLM ISO Abbreviation: BMC Health Serv Res Subsets: MEDLINE

A practical guide to estimating treatment effects in patients with rheumatic diseases using real-world data.

Authors: Pripp AH Łosińska K Korkosz M et al.

Source: Rheumatology international [Rheumatol Int] 2024 Jul; Vol. 44 (7), pp. 1265-1274. Date of Electronic Publication: 2024 Apr 24.

Publication Type: Journal Article

Journal Info: Publisher: Springer International Country of Publication: Germany NLM ID: 8206885 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1437-160X (Electronic) Linking ISSN: 01728172 NLM ISO Abbreviation: Rheumatol Int Subsets: MEDLINE

MeSH Terms: Rheumatic Diseases*/therapy, Humans ; Treatment Outcome ; Propensity Score ; Observational Studies as Topic/methods ; Regression Analysis ; Data Interpretation, Statistical

Time to antiviral treatment in mild-moderate COVID-19 in the emergency department: influence of prescribing physician and effect on outcomes.

Authors: Rodríguez-Leal CM González Del Castillo J Llorens P et al.

Corporate Authors: Rodríguez-Leal CM González Del Castillo J Llorens P et al.

Source: Internal and emergency medicine [Intern Emerg Med] 2025 Apr 21. Date of Electronic Publication: 2025 Apr 21.

Publication Type: Journal Article

Journal Info: Publisher: Springer Country of Publication: Italy NLM ID: 101263418 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1970-9366 (Electronic) Linking ISSN: 18280447 NLM ISO Abbreviation: Intern Emerg Med Subsets: MEDLINE

On variance estimation of the inverse probability-of-treatment weighting estimator: A tutorial for different types of propensity score weights.

Authors: Kostouraki A Hajage D Rachet B et al.

Source: Statistics in medicine [Stat Med] 2024 Jun 15; Vol. 43 (13), pp. 2672-2694. Date of Electronic Publication: 2024 Apr 15.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Wiley Country of Publication: England NLM ID: 8215016 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1097-0258 (Electronic) Linking ISSN: 02776715 NLM ISO Abbreviation: Stat Med Subsets: MEDLINE

MeSH Terms: Propensity Score*, Humans ; Observational Studies as Topic ; Computer Simulation ; Probability ; Randomized Controlled Trials as Topic ; Models, Statistical ; Lung Neoplasms

Quantification of racial and ethnic disparities in alcohol-related problems in light of different methodological approaches.

Authors: Ye Y Lui CK Martinez P et al.

Source: Addiction (Abingdon, England) [Addiction] 2025 May; Vol. 120 (5), pp. 873-883. Date of Electronic Publication: 2025 Jan 12.

Publication Type: Journal Article

Journal Info: Publisher: Wiley-Blackwell Country of Publication: England NLM ID: 9304118 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1360-0443 (Electronic) Linking ISSN: 09652140 NLM ISO Abbreviation: Addiction Subsets: MEDLINE

MeSH Terms: Alcohol Drinking*/ethnology , Alcohol Drinking*/epidemiology , Alcohol-Related Disorders*/ethnology , Alcohol-Related Disorders*/epidemiology , Alcoholism*/ethnology , Alcoholism*/epidemiology , Ethnicity*/statistics & numerical data , Health Status Disparities*, Adolescent ; Adult ; Aged ; Female ; Humans ; Male ; Middle Aged ; Young Adult ; Black or African American/statistics & numerical data ; Cross-Sectional Studies ; Hispanic or Latino/statistics & numerical data ; United States/epidemiology ; White/statistics & numerical data

Comparative effectiveness of laparoscopic versus open colectomy in colon cancer patients: a study protocol for emulating a target trial using cancer registry data.

Authors: Abera SF Robers G Kästner A et al.

Source: Journal of cancer research and clinical oncology [J Cancer Res Clin Oncol] 2025 Jan 11; Vol. 151 (1), pp. 34. Date of Electronic Publication: 2025 Jan 11.

Publication Type: Clinical Trial Protocol; Journal Article

Journal Info: Publisher: Springer-Verlag Country of Publication: Germany NLM ID: 7902060 Publication Model: Electronic Cited Medium: Internet ISSN: 1432-1335 (Electronic) Linking ISSN: 01715216 NLM ISO Abbreviation: J Cancer Res Clin Oncol Subsets: MEDLINE

MeSH Terms: Colectomy*/methods , Colonic Neoplasms*/surgery , Colonic Neoplasms*/pathology , Colonic Neoplasms*/mortality , Laparoscopy*/methods, Adult ; Female ; Humans ; Male ; Registries ; Survival Rate ; Clinical Trials, Phase III as Topic ; Randomized Controlled Trials as Topic ; Multicenter Studies as Topic

PNL: a software to build polygenic risk scores using a super learner approach based on PairNet, a Convolutional Neural Network.

Authors: Chen TH Lee CJ Chen SP et al.

Source: Bioinformatics (Oxford, England) [Bioinformatics] 2025 Feb 04; Vol. 41 (2).

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium: Internet ISSN: 1367-4811 (Electronic) Linking ISSN: 13674803 NLM ISO Abbreviation: Bioinformatics Subsets: MEDLINE

MeSH Terms: Neural Networks, Computer* , Software* , Multifactorial Inheritance*, Humans ; Asthma/genetics ; Diabetes Mellitus, Type 2/genetics ; Algorithms ; Genetic Predisposition to Disease ; Convolutional Neural Networks ; Genetic Risk Score

Rapid development of image analysis research tools: Bridging the gap between researcher and clinician with pyOsiriX.

Authors: Blackledge MD Collins DJ Koh DM et al.

Source: Computers in biology and medicine [Comput Biol Med] 2016 Feb 01; Vol. 69, pp. 203-12. Date of Electronic Publication: 2015 Dec 18.

Publication Type: Journal Article

Journal Info: Publisher: Elsevier Country of Publication: United States NLM ID: 1250250 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1879-0534 (Electronic) Linking ISSN: 00104825 NLM ISO Abbreviation: Comput Biol Med Subsets: MEDLINE

MeSH Terms: Image Processing, Computer-Assisted* , Programming Languages*, Absorptiometry, Photon/*methods , Tomography, X-Ray Computed/*methods, Humans

Primary data for BJC Carbonic anhydrase IX is a pH-stat that sets an acidic tumour extracellular pH in vivo

Authors: Griffiths, JR Lee, Shen-Han McIntyre, Dominick John et al.

Subject Terms: Carbonic anhydrase IX, Extracellular pH, Intracellular pH, ISUCA, Magnetic Resonance Spectroscopy, MRS, pH-stat, Tumour pH

File Description: jMRUI http://www.jmrui.eu/ python www.python.org Excel; application/vnd.openxmlformats-officedocument.spreadsheetml.sheet; application/octet-stream

Relation: https://www.repository.cam.ac.uk/handle/1810/361916; https://doi.org/10.17863/CAM.26029

Availability: https://www.repository.cam.ac.uk/handle/1810/361916
https://doi.org/10.17863/CAM.26029

Sulfur dioxide in the mid-infrared transmission spectrum of WASP-39b.

Authors: Powell D Feinstein AD Lee EKH et al.

Source: Nature [Nature] 2024 Feb; Vol. 626 (8001), pp. 979-983. Date of Electronic Publication: 2024 Jan 17.

Publication Type: Journal Article

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 0410462 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1476-4687 (Electronic) Linking ISSN: 00280836 NLM ISO Abbreviation: Nature Subsets: PubMed not MEDLINE; MEDLINE

A statistical framework for neuroimaging data analysis based on mutual information estimated via a gaussian copula.

Authors: Ince RA Giordano BL Kayser C et al.

Source: Human brain mapping [Hum Brain Mapp] 2017 Mar; Vol. 38 (3), pp. 1541-1573. Date of Electronic Publication: 2016 Nov 17.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Wiley Country of Publication: United States NLM ID: 9419065 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1097-0193 (Electronic) Linking ISSN: 10659471 NLM ISO Abbreviation: Hum Brain Mapp Subsets: MEDLINE

MeSH Terms: Brain Mapping* , Information Theory* , Normal Distribution*, Brain/*diagnostic imaging , Brain/*physiology , Neuroimaging/*methods, Computer Simulation ; Electroencephalography ; Entropy ; Humans ; Sensitivity and Specificity

A broadband thermal emission spectrum of the ultra-hot Jupiter WASP-18b.

Authors: Coulombe LP Benneke B Challener R et al.

Source: Nature [Nature] 2023 Aug; Vol. 620 (7973), pp. 292-298. Date of Electronic Publication: 2023 May 31.

Publication Type: Journal Article

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 0410462 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1476-4687 (Electronic) Linking ISSN: 00280836 NLM ISO Abbreviation: Nature Subsets: PubMed not MEDLINE; MEDLINE

Generation of Scale-Free Assortative Networks via Newman Rewiring for Simulation of Diffusion Phenomena

Authors: Laura Di Lucchio Giovanni Modanese

Source: Stats, Vol 7, Iss 1, Pp 220-234 (2024)

Subject Terms: scale-free networks, assortative networks, network rewiring, agent-based models, Bass innovation diffusion model, Statistics, HA1-4737

File Description: electronic resource

Relation: https://www.mdpi.com/2571-905X/7/1/14; https://doaj.org/toc/2571-905X

Access URL: https://doaj.org/article/1ed58599ad2b446e8fba7bbd67fd64e7

A high internal heat flux and large core in a warm Neptune exoplanet.

Authors: Welbanks L Bell TJ Beatty TG et al.

Source: Nature [Nature] 2024 Jun; Vol. 630 (8018), pp. 836-840. Date of Electronic Publication: 2024 May 20.

Publication Type: Journal Article

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 0410462 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1476-4687 (Electronic) Linking ISSN: 00280836 NLM ISO Abbreviation: Nature Subsets: PubMed not MEDLINE; MEDLINE

Machine learning for prioritizing security code-based Vulnerability discovery

Authors: Ballestas, Rafael García Bedoya, Olmer

Contributors: Ballestas, Rafael García Bedoya, Olmer

Source: instname:Universidad de Bogotá Jorge Tadeo Lozano ; reponame:Expeditio Repositorio Institucional UJTL

Subject Terms: Ingeniería, Máquinas, Automatización, Auditorías, Seguridad, Security auditing

Subject Geographic: Colombia

File Description: 58 páginas; application/pdf

Relation: Alon, U., Zilberstein, M., Levy, O., and Yahav, E. (2019). code2vec: learning distributed representations of code. Proc. ACM Program. Lang., 3(POPL):1– 29.; Antunes, N. and Vieira, M. (2009). Comparing the Effectiveness of Penetration Testing and Static Code Analysis on the Detection of SQL Injection Vulnerabilities in Web Services. In 2009 15th IEEE Pacific Rim International Symposium on Dependable Computing, pages 301–306, Shanghai, China. IEEE.; Chang, Y., Liu, B., Cong, L., Deng, H., Li, J., and Chen, Y. (2019). Vulnerability Parser: A Static Vulnerability Analysis System for Android Applications. J. Phys.: Conf. Ser., 1288:012053.; Chong, S., Guttman, J., Datta, A., Myers, A., Pierce, B., Schaumont, P., Sherwood, T., and Zeldovich, N. (2016). Report on the NSF Workshop on Formal Methods for Security. arXiv:1608.00678 [cs]. arXiv: 1608.00678.; Dauber, E., Caliskan, A., Harang, R., Shearer, G., Weisman, M., Nelson, F., and Greenstadt, R. (2019). Git Blame Who?: Stylistic Authorship Attribution of Small, Incomplete Source Code Fragments. Proceedings on Privacy Enhancing Technologies, 2019(3):389–408. arXiv: 1701.05681; Ferreira, A. M. and Kleppe, H. (2011). Effectiveness of Automated Application Penetration Testing Tools. Technical report, OS3 University of Amsterdam.; FluidAttacks (2020). Integrates.; Free Software Foundation (2020). GNU diffutils; Ghaffarian, S. M. and Shahriari, H. R. (2017). Software Vulnerability Analysis and Discovery Using Machine-Learning and Data-Mining Techniques: A Survey. ACM Computing Surveys, 50(4):1–36.; Li, Z., Zou, D., Xu, S., Jin, H., Zhu, Y., and Chen, Z. (2018a). SySeVR: A Framework for Using Deep Learning to Detect Software Vulnerabilities. arXiv:1807.06756 [cs, stat]. arXiv: 1807.06756.; Li, Z., Zou, D., Xu, S., Ou, X., Jin, H., Wang, S., Deng, Z., and Zhong, Y. (2018b). VulDeePecker: A Deep Learning-Based System for Vulnerability Detection. Proceedings 2018 Network and Distributed System Security Symposium. arXiv: 1801.01681.; Moor, O. d., Verbaere, M., Hajiyev, E., Avgustinov, P., Ekman, T., Ongkingco, N., Sereni, D., and Tibble, J. (2007). Keynote Address: .QL for Source Code Analysis. In Seventh IEEE International Working Conference on Source Code Analysis and Manipulation (SCAM 2007), pages 3–16, Paris, France. IEEE; Ng, A. (2016). What Artificial Intelligence Can and Can’t Do Right Now. Harvard Business Review. Section: Analytics.; Pedregosa, F., Varoquaux, G., Gramfort, A., Michel, V., Thirion, B., Grisel, O., Blondel, M., Prettenhofer, P., Weiss, R., Dubourg, V., Vanderplas, J., Passos, A., Cournapeau, D., Brucher, M., Perrot, M., and Duchesnay, E. (2011). Scikit-learn: Machine learning in Python. Journal of Machine Learning Research, 12:2825–2830.; Rice, H. G. (1953). Classes of recursively enumerable sets and their decision problems. Trans. Amer. Math. Soc., 74(2):358–366.; Schwartz, E. J., Avgerinos, T., and Brumley, D. (2010). All You Ever Wanted to Know about Dynamic Taint Analysis and Forward Symbolic Execution (but Might Have Been Afraid to Ask). In 2010 IEEE Symposium on Security and Privacy, pages 317–331, Oakland, CA, USA. IEEE.; Sommer, R. and Paxson, V. (2010). Outside the Closed World: On Using Machine Learning for Network Intrusion Detection. In 2010 IEEE Symposium on Security and Privacy, pages 305–316, Oakland, CA, USA. IEEE.; Stefinko, Y., Piskozub, A., and Banakh, R. (2016). Manual and automated penetration testing. Benefits and drawbacks. Modern tendency. In 2016 13th International Conference on Modern Problems of Radio Engineering, Telecommunications and Computer Science (TCSET), pages 488–491, Lviv, Ukraine. IEEE.; Yamaguchi, F., Wressnegger, C., Gascon, H., and Rieck, K. (2013). Chucky: exposing missing checks in source code for vulnerability discovery. In Proceedings of the 2013 ACM SIGSAC conference on Computer & communications security - CCS ’13, pages 499–510, Berlin, Germany. ACM Press.; http://hdl.handle.net/20.500.12010/17241; http://expeditio.utadeo.edu.co

Availability: https://hdl.handle.net/20.500.12010/17241
http://expeditio.utadeo.edu.co