Search Results - "terminal-restriction fragment length polymorphism"

Characterization of microbial communities in marine surface sediments by terminal-restriction fragment length polymorphism (T-RFLP) analysis and quinone profiling

Authors: Urakawa, Hidetoshi Yoshida, Tsutomu Nishimura, Masahiko et al.

Source: Marine Ecology Progress Series, 2001 Sep . 220, 47-57.

Access URL: https://www.jstor.org/stable/24864842

Profile of Gut Bacteria in Hypertensive Patients Based on Terminal Restriction Fragment Length Polymorphism Analysis

Authors: Ririn Herni Putri Rika Indri Astuti Sri Budiarti

Source: Hayati Journal of Biosciences, Vol 30, Iss 3 (2023)

Subject Terms: QH301-705.5, Biology (General), 3. Good health

Access URL: https://doaj.org/article/bc814be4fc124ae4acc1d4eb2ff4ed27

Analysis of decomposing wood wastes in the Lagos Lagoon using terminal-restriction fragment length polymorphism and illumina sequencing platform

Authors: O. M. Buraimoh G. A. Adewumi N. M. Akinyemi et al.

Source: Nigerian Journal of Technological Development; Vol. 19 No. 2 (2022); 116-127
Nigerian Journal of Technological Development, Vol 19, Iss 2 (2022)

Subject Terms: 0301 basic medicine, Microbial diversity, Technology, 0303 health sciences, QC801-809, Geophysics. Cosmic physics, Biotic communities, 15. Life on land, Wood wastes, 6. Clean water, 3. Good health, Culture-independent techniques, 03 medical and health sciences, 13. Climate action, Wood wastes, Biotic communities, Microbial diversity, Amplicon sequencing, Culture-independent techniques, 14. Life underwater, Amplicon sequencing

File Description: application/pdf

Access URL: https://www.ajol.info/index.php/njtd/article/view/229042
https://doaj.org/article/ead62251e6864ac28b0833b833fb0bac

Trends in bacterial and fungal communities in ant nests observed with Terminal-Restriction Fragment Length Polymorphism (T-RFLP) and Next Generation Sequencing (NGS) techniques-validity and compatibility in ecological studies

Authors: Lindström, Stafva Rowe, Owen F. Timonen, Sari et al.

Source: PeerJ. 6

Subject Terms: NGS, T-RFLP, Fungi, Bacteria, Ants, Formica exsecta, Illumina MiSeq, Spatiotemporal trends, Microbial communities

File Description: electronic

Access URL: https://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-150673
https://doi.org/10.7717/peerj.5289

USING TERMINAL RESTRICTION FRAGMENT LENGTH POLYMORPHISM (T-RFLP) TO MONITOR CHANGES IN FUNGAL POPULATIONS ASSOCIATED WITH PLANTS

Authors: Yu, M. Hodgetts, J. Rossall, S. et al.

Source: Journal of Plant Pathology, 2009 Jul 01. 91(2), 417-423.

Access URL: https://www.jstor.org/stable/41998637

Influence of elevated CO2 on the fungal community in a coastal scrub oak forest soil investigated with terminal-restriction fragment length polymorphism analysis

Authors: Klamer, Morten Roberts, MS Levine, LH et al.

Contributors: Klamer, Morten Roberts, MS Levine, LH et al.

Source: Applied and Environmental Microbiology. 68(9):4370-4376

Subject Terms: Natural Sciences, Biological Sciences, Ecology (including Biodiversity Conservation), Naturvetenskap, Biologi, Ekologi

Access URL: https://doi.org/10.1128/AEM.68.9.4370-4376.2002

Effect of hydrogen on soil bacterial community structure in two soils as determined by terminal restriction fragment length polymorphism

Authors: Zhang, Ye He, Xiang Dong, Zhongmin

Source: Plant and Soil, 2009 Jul 01. 320(1/2), 295-305.

Access URL: https://www.jstor.org/stable/24130070

Comparison of Bacterial Communities in New England Sphagnum Bogs Using Terminal Restriction Fragment Length Polymorphism (T-RFLP)

Authors: Morales, Sergio E. Mouser, Paula J. Ward, Naomi et al.

Source: Microbial Ecology, 2006 Jul 01. 52(1), 34-44.

Access URL: https://www.jstor.org/stable/25153356

Characterization of Microbial Diversity in Hypersaline Environments by Melting Profiles and Reassociation Kinetics in Combination with Terminal Restriction Fragment Length Polymorphism (T-RFLP)

Source: Microbial Ecology, 2003 Oct 01. 46(3), 291-301.

Access URL: https://www.jstor.org/stable/4287756

Accuracy of a terminal-restriction fragment length polymorphism (T-RFLP) method to characterize oral fungi

Authors: Piyanate Kesakomol

Soil pretreatment and fast cell lysis for direct polymerase chain reaction from forest soils for terminal restriction fragment length polymorphism analysis of fungal communities

Authors: Cheng, Fei Hou, Lin Woeste, Keith et al.

Source: Braz J Microbiol
Brazilian Journal of Microbiology v.47 n.4 2016
Brazilian Journal of Microbiology
Sociedade Brasileira de Microbiologia (SBM)
instacron:SBM
Brazilian Journal of Microbiology, Volume: 47, Issue: 4, Pages: 817-827, Published: DEC 2016

Subject Terms: DNA, Bacterial, 0301 basic medicine, 0303 health sciences, Cell lysis, DNA purity, Microbiota, Terminal restriction fragment length polymorphism, Fungal community, Fungi, Forests, Microbiology, Polymerase Chain Reaction, 6. Clean water, 3. Good health, Calcium Chloride, Soil, 03 medical and health sciences, DNA extraction method, Environmental Microbiology, DNA, Fungal, Polymorphism, Restriction Fragment Length, Soil Microbiology

File Description: text/html

Access URL: https://pubmed.ncbi.nlm.nih.gov/27528083
https://www.sciencedirect.com/science/article/pii/S1517838216305354
https://core.ac.uk/display/82083612
http://europepmc.org/abstract/MED/27528083
http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822016000400817
http://www.scielo.br/j/bjm/a/9LsSdVVWHGkmJcRm54n5hhc/
https://www.nrs.fs.fed.us/pubs/52934
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822016000400817
http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822016000400817&lng=en&tlng=en

Comparative lactic acid bacteria (LAB) profiles during dadih fermentation with spontaneous and back-slopping methods, as identified by terminal-restriction fragment length polymorphism (T-RFLP)

Authors: Chandra Utami Wirawati Mirnawati Bachrum Sudarwanto Denny Widaya Lukman et al.

Source: Indonesian Journal of Biotechnology, Vol 26, Iss 3, Pp 115-121 (2021)

Subject Terms: dadih, lactic acid bacteria (lab), dynamic diversity, t-rflp, Medicine, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://jurnal.ugm.ac.id/ijbiotech/article/view/61164; https://doaj.org/toc/0853-8654; https://doaj.org/toc/2089-2241

Access URL: https://doaj.org/article/5925c0b88d004848b2fbe5ce82bd3b78

Comparing activated sludge fungal community population diversity using denaturing gradient gel electrophoresis and terminal restriction fragment length polymorphism

Authors: Evans, Tegan N Watson, Garth Rees, Gavin N. et al.

Contributors: Evans, Tegan N Watson, Garth Rees, Gavin N. et al.

Source: Antonie van Leeuwenhoek. 105:559-569

Subject Terms: 0301 basic medicine, 0303 health sciences, Sewage, 270000 Biological Sciences, Denaturing Gradient Gel Electrophoresis, Terminal restriction fragment length polymorphism, ITS region, Fungi, Denaturing gradient gel electrophoresis, Biodiversity, 6. Clean water, 03 medical and health sciences, Activated sludge community profiling, DNA, Ribosomal Spacer, 11. Sustainability, RNA, Ribosomal, 18S, Fungal diversity, Polymorphism, Restriction Fragment Length

Access URL: https://pubmed.ncbi.nlm.nih.gov/24402790
https://europepmc.org/article/MED/24402790
https://www.ncbi.nlm.nih.gov/pubmed/24402790
https://link.springer.com/article/10.1007/s10482-013-0108-x
https://pubmed.ncbi.nlm.nih.gov/24402790/
https://link.springer.com/article/10.1007/s10482-013-0108-x/fulltext.html

Terminal restriction fragment length polymorphism is an 'old school' reliable technique for swift microbial community screening in anaerobic digestion

Authors: De Vrieze, Jo Ijaz, Umer Z. Saunders, Aaron M. et al.

Source: Sci Rep
De Vrieze, J, Ijaz, U Z, Saunders, A M & Theuerl, S 2018, 'Terminal restriction fragment length polymorphism is an “old school” reliable technique for swift microbial community screening in anaerobic digestion', Scientific Reports, vol. 8, no. 1, 16818. https://doi.org/10.1038/s41598-018-34921-7
SCIENTIFIC REPORTS

Subject Terms: 0301 basic medicine, TRFLP Profiles, SUGAR-BEET SILAGE, PROCESS STABILITY, DIVERSITY, BACTERIAL COMMUNITY, CO-DIGESTION, 7. Clean energy, Article, 03 medical and health sciences, Waste Management, GRADIENT GEL-ELECTROPHORESIS, RNA, Ribosomal, 16S, Generation Amplicon Sequencing, Anaerobiosis, SLUDGE, AMMONIA, 0303 health sciences, Science & Technology, Bacteria, SPECIES RICHNESS, 16S RIBOSOMAL-RNA, Microbiota, Temperature, Biology and Life Sciences, Hydrogen-Ion Concentration, RARE BIOSPHERE, Archaea, Multidisciplinary Sciences, Bacterial TRFLP, TRFLP Data, Earth and Environmental Sciences, Science & Technology - Other Topics, BIOGAS MICROBIOME, PROCESS FAILURE, Polymorphism, Restriction Fragment Length, Terminal Restriction Fragment Length Polymorphism (TRFLP)

File Description: application/pdf

Access URL: https://www.nature.com/articles/s41598-018-34921-7.pdf
https://pubmed.ncbi.nlm.nih.gov/30429514
https://eprints.gla.ac.uk/170785/1/170785.pdf
https://ui.adsabs.harvard.edu/abs/2018NatSR...816818D/abstract
https://www.nature.com/articles/s41598-018-34921-7.pdf
https://vbn.aau.dk/ws/files/300262839/s41598_018_34921_7.pdf
https://vbn.aau.dk/da/publications/terminal-restriction-fragment-length-polymorphism-is-an-old-schoo
https://www.cabdirect.org/cabdirect/abstract/20193396464
http://europepmc.org/articles/PMC6235954
https://biblio.ugent.be/publication/8583332/file/8583335
http://hdl.handle.net/1854/LU-8583332
https://biblio.ugent.be/publication/8583332
http://doi.org/10.1038/s41598-018-34921-7

Monitoring associations between clade-level variation, overall community structure and ecosystem function in enhanced biological phosphorus removal (EBPR) systems using terminal-restriction fragment length polymorphism (T-RFLP)

Authors: Slater, F. R. Johnson, C. R. Blackall, L. L. et al.

Contributors: Slater, F. R. Johnson, C. R. Blackall, L. L. et al.

Source: Water Research. 44:4908-4923

Subject Terms: 0301 basic medicine, Likelihood Functions, Principal Component Analysis, 0303 health sciences, Candidatus 'Accumulibacter phosphatis' clades, Bacteria, Terminal-restriction fragment length polymorphism, Ecological selection, Phosphorus, 2302 Ecological Modelling, 15. Life on land, 2311 Waste Management and Disposal, 03 medical and health sciences, 2312 Water Science and Technology, Biodegradation, Environmental, Bioreactors, 2310 Pollution, RNA, Ribosomal, 16S, Candidatus 'Competibacter phosphatis', Ecosystem, Phylogeny, Polymorphism, Restriction Fragment Length

Access URL: https://pubmed.ncbi.nlm.nih.gov/20701946
https://researchbank.swinburne.edu.au/items/0789a80d-330c-4d4a-afca-7f573a05f3fc/1/
https://espace.library.uq.edu.au/view/UQ:215462
https://core.ac.uk/display/15095960
https://www.cabdirect.org/cabdirect/abstract/20103330832
https://www.cabdirect.org/abstracts/20103330832.html
https://www.sciencedirect.com/science/article/pii/S0043135410004963

Comparison of gut microbiota composition between laboratory‐bred marmosets (Callithrix jacchus) with chronic diarrhea and healthy animals using terminal restriction fragment length polymorphism analysis

Authors: Mutsumi Nakamura Eiki Takahashi Mutsumi Toyama et al.

Source: Microbiology and Immunology. 62:702-710

Subject Terms: DNA, Bacterial, Diarrhea, Male, 0301 basic medicine, 0303 health sciences, Base Sequence, Monkey Diseases, Callithrix, Real-Time Polymerase Chain Reaction, Bacterial Typing Techniques, Gastrointestinal Microbiome, Feces, 03 medical and health sciences, Genes, Bacterial, Animals, Laboratory, RNA, Ribosomal, 16S, Animals, Cluster Analysis, Female, Bifidobacterium, Phylogeny, Polymorphism, Restriction Fragment Length

Access URL: https://pubmed.ncbi.nlm.nih.gov/30350387
https://pubmed.ncbi.nlm.nih.gov/30350387/
https://kyushu-u.pure.elsevier.com/en/publications/comparison-of-gut-microbiota-composition-between-laboratory-bred-
https://onlinelibrary.wiley.com/doi/10.1111/1348-0421.12655
https://www.ncbi.nlm.nih.gov/pubmed/30350387
https://europepmc.org/article/MED/30350387

PCR-terminal restriction fragment length polymorphism for direct detection and identification of dermatophytes in veterinary mycology

Authors: Julie Verrier Laëtitia Jeanneau-Imparato Catherine Guillet et al.

Contributors: Julie Verrier Laëtitia Jeanneau-Imparato Catherine Guillet et al.

Source: Medical Mycology. 57:447-456

Subject Terms: Microbiological Techniques, Veterinary Medicine, 0301 basic medicine, 0303 health sciences, [SDV.BA.MVSA]Life Sciences [q-bio]/Animal biology/Veterinary medicine and animal Health, Time Factors, [SDV]Life Sciences [q-bio], Arthrodermataceae, [SDV.BA.MVSA] Life Sciences [q-bio]/Animal biology/Veterinary medicine and animal Health, [SDV.MP.MYC] Life Sciences [q-bio]/Microbiology and Parasitology/Mycology, DNA, Ribosomal, Polymerase Chain Reaction, Sensitivity and Specificity, 3. Good health, [SDV] Life Sciences [q-bio], 03 medical and health sciences, Molecular Diagnostic Techniques, Tinea, DNA, Ribosomal Spacer, RNA, Ribosomal, 28S, Animals, DNA, Fungal, [SDV.MP.MYC]Life Sciences [q-bio]/Microbiology and Parasitology/Mycology, Polymorphism, Restriction Fragment Length

Access URL: https://pubmed.ncbi.nlm.nih.gov/30085212
https://univ-angers.hal.science/hal-02483160v1
https://doi.org/10.1093/mmy/myy058
https://academic.oup.com/mmy/article-abstract/57/4/447/5062853
https://www.ncbi.nlm.nih.gov/pubmed/30085212
https://pubmed.ncbi.nlm.nih.gov/30085212/
https://hal.univ-angers.fr/hal-02483160
http://okina.univ-angers.fr/publications/ua18170

Modification of the terminal restriction fragment length polymorphism analysisfor assessment of a specific taxonomic group within a soil microbial community

Authors: M. Ságová-Marečková G. Novotná J. Kopecký

Source: Plant, Soil and Environment, Vol 55, Iss 9, Pp 397-403 (2009)

Subject Terms: 0301 basic medicine, 0303 health sciences, 03 medical and health sciences, Plant culture, actinobacteria, terminal restriction fragment length polymorphism, 15. Life on land, bacterial community, SB1-1110

Access URL: https://www.agriculturejournals.cz/publicFiles/11394.pdf
https://doaj.org/article/c7c6d5a462ba4d89ac8d86987049c7f7
https://www.cabdirect.org/cabdirect/abstract/20093301449

Assessment of anaerobic wastewater treatment failure using terminal restriction fragment length polymorphism analysis

Authors: Scully, C. Collins, G. O'Flaherty, V. et al.

Contributors: Scully, C. Collins, G. O'Flaherty, V. et al.

Source: Journal of Applied Microbiology. 99:1463-1471

Subject Terms: anaerobic digestion, 0301 basic medicine, start-up, Industrial Waste, Waste Disposal, Fluid, microbial community dynamics, 12. Responsible consumption, Industrial Microbiology, 03 medical and health sciences, Bioreactors, ethanol degradation, bacterial, Anaerobiosis, hybrid reactor, 0303 health sciences, Bacteria, Sewage, methanogenic activity, sulfate addition, crenarchaeota, 6. Clean water, 16s rdna, Biodegradation, Environmental, Genes, Bacterial, terminal restriction fragment length polymorphism, volatile fatty-acid, community structure, Methane, Polymorphism, Restriction Fragment Length, Hydrogen, wastewaters

Access URL: https://onlinelibrary.wiley.com/doi/pdfdirect/10.1111/j.1365-2672.2005.02743.x
https://pubmed.ncbi.nlm.nih.gov/16313419
https://dialnet.unirioja.es/servlet/articulo?codigo=1324721
https://onlinelibrary.wiley.com/doi/10.1111/j.1365-2672.2005.02743.x
https://www.ncbi.nlm.nih.gov/pubmed/16313419
https://sfamjournals.onlinelibrary.wiley.com/doi/full/10.1111/j.1365-2672.2005.02743.x
http://onlinelibrary.wiley.com/doi/10.1111/j.1365-2672.2005.02743.x/full
https://hdl.handle.net/10379/9854
https://doi.org/10.13025/23967

Terminal Restriction Fragment Length Polymorphism (T-RFLP) to Estimate Fungal Diversity

Authors: Liliya G. Nikolcheva Felix Bärlocher

Source: Methods to Study Litter Decomposition ISBN: 9783030305147

Subject Terms: 3. Good health

Access URL: https://link.springer.com/chapter/10.1007%2F978-3-030-30515-4_34