Search Results - "key string algorithm - KSA"

CENP-B box and pJα sequence distribution in human alpha satellite higher-order repeats (HOR).

Authors: Rosandić, Marija Paar, Vladimir Basar, Ivan et al.

Source: Chromosome Research; Nov2006, Vol. 14 Issue 7, p735-753, 19p

Consensus Higher Order Repeats and Frequency of String Distributions in Human Genome.

Authors: Paar, Vladimir Basar, Ivan Rosandic, Marija et al.

Source: Current Genomics; Apr2007, Vol. 8 Issue 2, p93-111, 19p, 23 Charts, 1 Graph

Subject Terms: HUMAN genome, MICROSATELLITE repeats, GENOMICS, HUMAN chromosomes, MONOMERS, NUCLEOTIDE sequence

Consensus Higher Order Repeats and Frequency of String Distributions in Human Genome

Authors: Ivan Basar Vladimir Paar Marija Rosandić et al.

Source: Current Genomics. 8:93-111

Subject Terms: higher order repeat, frequency of string distribution, 0301 basic medicine, 0303 health sciences, 03 medical and health sciences, consensus, human genome, DNA, key string algorithm

Access URL: https://europepmc.org/articles/pmc2435359?pdf=render
https://pubmed.ncbi.nlm.nih.gov/18660848
https://www.bib.irb.hr/348011
https://www.bib.irb.hr/348011
https://www.eurekaselect.com/59002
https://europepmc.org/articles/PMC2435359
https://www.ncbi.nlm.nih.gov/pubmed/18660848

CENP-B box and pJα sequence distribution in human alpha satellite higher-order repeats (HOR)

Authors: Matko Glunčić Ivan Pilaš Ivan Basar et al.

Source: Chromosome Research. 14:735-753

Subject Terms: 0301 basic medicine, 0303 health sciences, Base Sequence, Genome, Human, human alpha satellite, DNA, Satellite, higher-order repeats (HOR), 03 medical and health sciences, Sequence Homology, Nucleic Acid, Chromosomes, Human, Humans, Amino Acid Sequence, Centromere Protein B, Algorithms, Repetitive Sequences, Nucleic Acid

Access URL: https://pubmed.ncbi.nlm.nih.gov/17115329
https://www.bib.irb.hr/1024708
https://doi.org/10.1007/s10577-006-1078-x
https://link.springer.com/article/10.1007/s10577-006-1078-x
https://doi.org/10.1007/s10577-006-1078-x
http://www.phy.pmf.unizg.hr/~npavin/science/rosandic06.pdf
http://europepmc.org/abstract/MED/17115329
https://pubmed.ncbi.nlm.nih.gov/17115329/
https://link.springer.com/article/10.1007/s10577-006-1078-x
https://pubag.nal.usda.gov/catalog/629245
https://www.ncbi.nlm.nih.gov/pubmed/17115329

Intragene Higher Order Repeats in Neuroblastoma BreakPoint Family Genes Distinguish Humans from Chimpanzees.

Authors: Paar, Vladimir Glunčić, Matko Rosandić, Marija et al.

Source: Molecular Biology & Evolution; Jun2011, Vol. 28 Issue 6, p1877-1892, 16p, 1 Illustration, 3 Diagrams, 4 Charts, 5 Graphs

Large Tandem, Higher Order Repeats and Regularly Dispersed Repeat Units Contribute Substantially to Divergence Between Human and Chimpanzee Y Chromosomes.

Authors: Paar, Vladimir Glunčić, Matko Basar, Ivan et al.

Source: Journal of Molecular Evolution; Jan2011, Vol. 72 Issue 1, p34-55, 22p, 3 Diagrams, 12 Charts, 4 Graphs

Subject Terms: Y chromosome, X chromosome, HUMAN chromosomes, CHIMPANZEES, HUMAN genetics, ANIMAL genetics

ColorHOR - novel graphical algorithm for fast scan of alpha satellite higher-order repeats and HOR annotation for GenBank sequence of human genome

Authors: Paar, Vladimir Pavin, Nenad Rosandi , Marija et al.

Subject Terms: Article

File Description: text/html

Relation: http://bioinformatics.oxfordjournals.org/cgi/content/short/bti072v1; http://dx.doi.org/10.1093/bioinformatics/bti072

Availability: http://bioinformatics.oxfordjournals.org/cgi/content/short/bti072v1
https://doi.org/10.1093/bioinformatics/bti072

ColorHOR—novel graphical algorithm for fast scan of alpha satellite higher-order repeats and HOR annotation for GenBank sequence of human genome.

Authors: Vladimir Paar Nenad Pavin Marija Rosandić et al.

Source: Bioinformatics; Apr2005, Vol. 21 Issue 7, p846-852, 7p

Key-string Algorithm -- Novel Approach to Computational Analysis of Repetitive Sequences in Human Centromeric DNA

Authors: Marija Rosandic Vladimir Paar Matko Gluncic et al.

Contributors: Marija Rosandic Vladimir Paar Matko Gluncic et al.

Source: http://www.cmj.hr/2003/44/4/12950141.pdf.

File Description: application/pdf

Relation: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.129.9037; http://www.cmj.hr/2003/44/4/12950141.pdf

Availability: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.129.9037
http://www.cmj.hr/2003/44/4/12950141.pdf

Key-string algorithm--novel approach to computational analysis of repetitive sequences in human centromeric DNA

Authors: Basar, Ivan Glunčić, Matko Durajlija-Žinić, Sonja et al.

Source: Croatian medical journal. 44(4)

Subject Terms: 0301 basic medicine, chromosomes, Centromere, Molecular Sequence Data, repetitive sequences, molecular sequence data, DNA, Satellite, Polymerase Chain Reaction, Sensitivity and Specificity, algorithm, alpha satellite DNA, 03 medical and health sciences, computational biology, Animals, Humans, Molecular Biology, 0303 health sciences, algorithm, Base Sequence, DNA satellite, Chromosome Mapping, Computational Biology, alpha satellite DNA, Sequence Analysis, DNA, human pair 7, Fourier analysis, nucleic acids, centromere, point mutation, Tandem Repeat Sequences, Nucleic Acid Conformation, Algorithms, Chromosomes, Human, Pair 7

Access URL: https://pubmed.ncbi.nlm.nih.gov/12950141
https://www.bib.irb.hr/880543
https://www.bib.irb.hr/121788

Plant Genomics And Bioinformatics

Authors: G. P. Rao C. Wagner

Resource Type: eBook.

Subjects: Bioinformatics, Plant genomes, Computational biology

Categories: SCIENCE / Life Sciences / Botany

Key-string algorithm--novel approach to computational analysis of repetitive sequences in human centromeric DNA.

Authors: Rosandić M Paar V Gluncić M et al.

Source: Croatian medical journal [Croat Med J] 2003 Aug; Vol. 44 (4), pp. 386-406.

Publication Type: Journal Article; Review

Journal Info: Publisher: Medicinska Naklada Country of Publication: Croatia NLM ID: 9424324 Publication Model: Print Cited Medium: Print ISSN: 0353-9504 (Print) Linking ISSN: 03539504 NLM ISO Abbreviation: Croat Med J Subsets: MEDLINE

MeSH Terms: Algorithms* , Chromosomes, Human, Pair 7* , Computational Biology*, Centromere/*genetics , DNA, Satellite/*genetics, Animals ; Base Sequence ; Centromere/physiology ; Chromosome Mapping ; DNA, Satellite/physiology ; Humans ; Molecular Biology ; Molecular Sequence Data ; Nucleic Acid Conformation ; Polymerase Chain Reaction ; Sensitivity and Specificity ; Sequence Analysis, DNA ; Tandem Repeat Sequences