Výsledky vyhľadávania - "genome sequence"

CREMSA: compressed indexing of (ultra) large multiple sequence alignments

Autori: Salson, Mikaël Boddaert, Arthur Gueye, Awa Bousso a ďalší

Prispievatelia: Salson, Mikaël Boddaert, Arthur Gueye, Awa Bousso a ďalší

Zdroj: Bioinformatics

Predmety: Genome Sequence Analysis, Compression, Indexing, Multiple sequence alignment, [INFO.INFO-BI] Computer Science [cs]/Bioinformatics [q-bio.QM]

Popis súboru: application/pdf

Prístupová URL adresa: https://hal.science/hal-04910677v2/document
https://hal.science/hal-04910677v2
https://doi.org/10.1093/bioinformatics/btaf211

Isolation, characterization and phylogenetic analyses of avian influenza A (H9N2) viruses isolated from poultry between 2019 and 2023 in Egypt

Autori: Mosaad, Zienab Hagag, Naglaa M. Elsayed, Moataz M. a ďalší

Zdroj: BMC Veterinary Research. 21(1)

Predmety: Avian influenza, Poultry, Real-time RT-PCR, Hemagglutinin, Neuraminidase, Live bird markets, Genome sequence, Egypt

Popis súboru: electronic

Prístupová URL adresa: https://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-564036
https://doi.org/10.1186/s12917-025-04514-4

Oarfish: enhanced probabilistic modeling leads to improved accuracy in long read transcriptome quantification

Autori: Zahra Zare Jousheghani Noor Pratap Singh Rob Patro

Zdroj: Bioinformatics

Predmety: Genome Sequence Analysis

Ultrafast and ultralarge multiple sequence alignments using TWILIGHT

Autori: Yu-Hsiang Tseng Sumit Walia Yatish Turakhia

Zdroj: Bioinformatics
Bioinformatics, vol 41, iss Supplement_1

Predmety: Genome Sequence Analysis, SARS-CoV-2, Computational Biology, COVID-19, Sequence Alignment, Algorithms, Software

Popis súboru: application/pdf

Prístupová URL adresa: https://escholarship.org/uc/item/7t03z92g
https://escholarship.org/content/qt7t03z92g/qt7t03z92g.pdf

Spatial transcriptomics deconvolution methods generalize well to spatial chromatin accessibility data

Autori: Sarah Ouologuem Laura D Martens Anna C Schaar a ďalší

Zdroj: Bioinformatics

Predmety: Genome Sequence Analysis

DNABERT-S: pioneering species differentiation with species-aware DNA embeddings

Autori: Zhihan Zhou Weimin Wu Harrison Ho a ďalší

Zdroj: Bioinformatics
Bioinformatics, vol 41, iss Supplement_1

Predmety: FOS: Computer and information sciences, Bioinformatics, Computer Science - Artificial Intelligence, Bioinformatics and Computational Biology, Mathematical sciences, Mathematical Sciences, Machine Learning, Computational Engineering, Finance, and Science (cs.CE), Genome Sequence Analysis, Species Specificity, Information and Computing Sciences, Genetics, Quantitative Biology - Genomics, Computer Science - Computational Engineering, Finance, and Science, Genomics (q-bio.GN), Genome, Computer Science - Computation and Language, Human Genome, DNA, Genomics, Biological Sciences, Biological sciences, Good Health and Well Being, Artificial Intelligence (cs.AI), FOS: Biological sciences, Information and computing sciences, Generic health relevance, Sequence Analysis, Computation and Language (cs.CL), Algorithms

Popis súboru: application/pdf

Prístupová URL adresa: https://pubmed.ncbi.nlm.nih.gov/38410647
http://arxiv.org/abs/2402.08777
https://escholarship.org/content/qt9kf0s9g0/qt9kf0s9g0.pdf
https://escholarship.org/uc/item/9kf0s9g0

Taxonomía, bases de la resistencia y epidemiología molecular del complejo mycobacterium abscessus

Autori: Rubio Bueno, Marc

Prispievatelia: University/Department: Universitat Autònoma de Barcelona. Departament de Genètica i de Microbiologia

Thesis Advisors: Coll Figa, Pedro

Zdroj: TDX (Tesis Doctorals en Xarxa)

Predmety: Mycobacterium abscessus, Seqüenciació massiva, Secuenciación masiva, Whole genome sequence, Epidemiologia, Epidemiología, Epidemiology, Ciències Experimentals

Popis súboru: application/pdf

Prístupová URL adresa: http://hdl.handle.net/10803/667367

WHOLE GENOME SEQUENCING OF ENTEROBACTER CLOACAE SM32 IN THE FIRST ISOLATION OF THE MEDICAGO SATIVA L. ROOT NODULES IN MOSUL, IRAQ CAPABLE OF PRODUCING INDOLE-3-ACETIC ACID

Autori: S. M. Mohammed R. H. Sultan V. Edavana

Zdroj: مجلة الأنبار للعلوم الزراعية, Vol 23, Iss 1, Pp 391-404 (2025)

Predmety: enterobacter cloacae, whole genome sequence, rhizobacteria, Agriculture, iaa production

Prístupová URL adresa: https://doaj.org/article/3fcea1b92ad0459daa451cbc54ba6af6

Pathogenic variants prevalence patients with diabetic kidney disease in Japan: A descriptive study

Autori: Toyohiro Hashiba Yuka Sugawara Yosuke Hirakawa a ďalší

Zdroj: J Diabetes Investig
Journal of Diabetes Investigation, Vol 16, Iss 7, Pp 1263-1273 (2025)

Predmety: Rare pathogenic variant, Whole‐genome sequence, Diabetic kidney disease, RC648-665, Diseases of the endocrine glands. Clinical endocrinology, Regular Articles

Prístupová URL adresa: https://pubmed.ncbi.nlm.nih.gov/40197820
https://doaj.org/article/b9d8d31981c64ae4b2e46a9288dcfa6f

Identification of Escherichia coli Virulence Gene from Diabetic Foot Ulcer (DFU) at the Diabetes Care Home, Bekasi, West Java, Indonesia

Autori: Inggraini, Maulin Anindita, Reza Ilsan, Noor Andryan a ďalší

Zdroj: BIOVALENTIA: Biological Research Journal; Vol. 11 No. 1 (2025); 11-16

Predmety: microbiology, molecular, genetic, diabetic, E.coli, Whole Genome Sequence, virulensi, gene, biotechnology

Popis súboru: application/pdf

Prístupová URL adresa: https://biovalentia.ejournal.unsri.ac.id/biov/article/view/448

Accés a la seqüència genòmica (II). Consideracions ètiques, legals i socials

Autori: Nicolás, Pilar Pampols, Teresa Fenollar-Cortés, María a ďalší

Zdroj: Revista de Bioética y Derecho; 2025: Núm. 65-nov; 55-81

Predmety: Sequencing institutions, storage and delivery of raw genomic data, Acceso a la secuencia del genoma, Practicas y políticas de almacenamiento y entrega de la secuencia genómica cruda, Raw genomic data, access upon request, Ethical, legal and practical issues of access to raw genomic data, Access to genome sequence, Practices and policies for storage and delivery of genome raw sequence, Practiques i polítiques d'emmagatzematge i lliurament de la seqüència genòmica crua, Reutilización de la secuencia genómica cruda, Reuses of genome raw sequence, Accés a la seqüència del genoma, Dades genòmiques crues, sol·licitud d'accés, Reutilització de la seqüència genòmica crua, Datos genómicos crudos, solicitud de acceso

Popis súboru: application/pdf

Prístupová URL adresa: https://revistes.ub.edu/index.php/RBD/article/view/49385

The genome sequence of the drinker, Euthrix potatoria (Linnaeus, 1758) (Lepidoptera: Lasiocampidae)

Autori: Boyes, Douglas Boyes, Clare University of Oxford and Wytham Woods Acquisition Lab a ďalší

Predmety: Lepidoptera, Euthrix potatoria, genome sequence, drinker, chromosomal

Prístupová URL adresa: https://nora.nerc.ac.uk/id/eprint/540357/

Integrating whole-genome resequencing data reveals adaptive selection signatures in sheep populations under extreme environments

Autori: Zhixu Pang Pengkun Yang Ke Cai a ďalší

Zdroj: BMC Genomics, Vol 26, Iss 1, Pp 1-16 (2025)

Predmety: Whole-genome sequence, Local adaptation, Sheep (Ovis aries), Genome–environment association, Genome-wide selection scan, Biotechnology, TP248.13-248.65, Genetics, QH426-470

Popis súboru: electronic resource

Relation: https://doaj.org/toc/1471-2164

Prístupová URL adresa: https://doaj.org/article/17a3df9742db492582a972da2202c70c

Genomic insights into Bordetella pertussis evolution and macrolide resistance in Yiwu, China

Autori: Wuqin Xu Qianru Wei Bian Wu a ďalší

Zdroj: BMC Genomics, Vol 26, Iss 1, Pp 1-11 (2025)

Predmety: Bordetella pertussis, Macrolides resistance, Whole genome sequence, Phylogeny, Genomic evolution, Biotechnology, TP248.13-248.65, Genetics, QH426-470

Popis súboru: electronic resource

Relation: https://doaj.org/toc/1471-2164

Prístupová URL adresa: https://doaj.org/article/e2987cb408ed493d945ee3ae16dc362a

Genomic Characterization of a Fluoroquinolone Intermediate Resistance Herbaspirillum sp. Strain HhutSZ1 Rarely Causing Bacteremia

Autori: Luo Y Li T Zhang S a ďalší

Zdroj: Infection and Drug Resistance, Vol 18, Iss Issue 1, Pp 5887-5894 (2025)

Predmety: Herbaspirillum hutitense, bloodstream infection, whole genome sequence, antibiotic resistance, Infectious and parasitic diseases, RC109-216

Popis súboru: electronic resource

Relation: https://www.dovepress.com/genomic-characterization-of-a-fluoroquinolone-intermediate-resistance--peer-reviewed-fulltext-article-IDR; https://doaj.org/toc/1178-6973

Prístupová URL adresa: https://doaj.org/article/bec7acad4ac54c88a6eb0b37b3eee0e7

High-Resolution Melting Analysis for Differentiation of Sclerotium (=Agroathelia) rolfsii, S. delphinii, and Two Intraspecific Groups of S. rolfsii

Autori: Dong Jae Lee Young-Joon Choi

Zdroj: Mycobiology, Vol 53, Iss 6, Pp 760-768 (2025)

Predmety: Genome sequence, molecular diagnostics, HRM, qPCR, SSR marker, Botany, QK1-989

Popis súboru: electronic resource

Relation: https://doaj.org/toc/1229-8093; https://doaj.org/toc/2092-9323

Prístupová URL adresa: https://doaj.org/article/98e8751d2f544b87a52fd5334a1b48f2

Genomic Insights into a Multidrug-Resistant Escherichia Coli of sequence type 155: A Ceftazidime-Avibactam Resistant Strain Harboring Four Classes of β-Lactamases

Autori: Mei Han Wenjing Liu Jia Li a ďalší

Zdroj: Journal of Global Antimicrobial Resistance, Vol 41, Iss, Pp 15-19 (2025)

Predmety: Whole-genome sequence, E. coli, β-lactamase, Microbiology, QR1-502, NDM-5

Prístupová URL adresa: https://pubmed.ncbi.nlm.nih.gov/39694411
https://doaj.org/article/17b85bb0475d4339802d90bc336c2b5d

MutBERT: probabilistic genome representation improves genomics foundation models

Autori: Long, Weicai Su, Houcheng Xiong, Jiaqi a ďalší

Zdroj: Bioinformatics

Predmety: Genome Sequence Analysis

An ultra-conserved poison exon in the Tra2b gene encoding a splicing activator is essential for male fertility and meiotic cell division

Autori: Caroline Dalgliesh Saad Aldalaqan Christian Atallah a ďalší

Zdroj: EMBO J

Predmety: Alternative Splicing, Fertility, Ultraconserved Genome Sequence, Poison Exon, Spermatogenesis, Article

Popis súboru: application/pdf

Prístupová URL adresa: https://pubmed.ncbi.nlm.nih.gov/39748121

Genotypic Antimicrobial Resistance Profiles of Diarrheagenic Escherichia coli and Nontyphoidal Salmonella Strains Isolated from Children with Diarrhea and Their Exposure Environments in Ethiopia

Autori: Dinaol Belina Tesfaye Gobena Ameha Kebede a ďalší

Zdroj: Infect Drug Resist
Infection and Drug Resistance, Vol Volume 17, Pp 4955-4972 (2024)
Belina, D, Gobena, T, Kebede, A, Chimdessa, M & Hald, T 2024, ' Genotypic Antimicrobial Resistance Profiles of Diarrheagenic Escherichia coli and Nontyphoidal Salmonella Strains Isolated from Children with Diarrhea and Their Exposure Environments in Ethiopia ', Infection and Drug Resistance, vol. 17, pp. 4955-4972 . https://doi.org/10.2147/IDR.S480395

Predmety: Foodborne pathogens, whole genome sequence, Whole genome sequence, Ethiopia, name=SDG 3 - Good Health and Well-being, antimicrobial resistance, Infectious and parasitic diseases, RC109-216, Antimicrobial resistance, ethiopia, foodborne pathogens, Original Research

Popis súboru: application/pdf

Prístupová URL adresa: https://pubmed.ncbi.nlm.nih.gov/39539744
https://doaj.org/article/7203a7316f414e3e9d74a5e38274c5dc
https://orbit.dtu.dk/en/publications/41f6412f-9278-46a5-99ed-76f5a725717c