Search Results - "constraint-based modeling"
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1
Authors: et al.
Source: High-Performance Modelling and Simulation for Big Data Applications Lecture Notes in Computer Science. :221-249
Subject Terms: Agent-based simulation, Big data, Biochemical simulation, Computational intelligence, Constraint-based modeling, Fuzzy logic, High-performance computing, Model reduction, Multi-scale modeling, Parameter estimation, Reaction-based modeling, Systems biology, Computer Science, Datavetenskap
File Description: print
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2
Authors: et al.
Source: mBio. 11(6):1-12
Subject Terms: Multi-omics analysis, Protein secretory pathway, Protein folding precision, Protein production, Constraint-based modeling
File Description: electronic
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3
Authors: et al.
Contributors: et al.
Subject Terms: Constraint-based modeling, Metabolomics, Metabolic networks, Transcriptomics, [INFO.INFO-BI] Computer Science [cs]/Bioinformatics [q-bio.QM]
File Description: application/pdf
Access URL: https://hal.science/hal-05181742v1
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4
Authors: et al.
Contributors: et al.
Source: Metabolic Engineering. 83:86-101
Subject Terms: Farquhar model, Constraint-based modeling, [SDV.BIBS] Life Sciences [q-bio]/Quantitative Methods [q-bio.QM], Arabidopsis thaliana, [SDV]Life Sciences [q-bio], Arabidopsis, Carbon Dioxide, [SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM], Models, Biological, 12. Responsible consumption, [SDV] Life Sciences [q-bio], Plant Leaves, Genome-scale model, Phenotype, Plant Cells, Resource Balance Analysis, Plant Systems Biology, Photosynthesis
File Description: application/pdf
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5
Authors:
Source: Proceedings of the National Academy of Sciences of the United States of America. 116(35):17592-17597
Subject Terms: Saccharomyces cerevisiae, metabolic switch, constraint-based modeling, Escherichia coli, growth rate
File Description: electronic
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6
Authors:
Source: Brief Bioinform
Subject Terms: computational strain design, Review, Models, Biological, 106005 Bioinformatik, SDG 3 - Good Health and Well-being, Metabolic Engineering, constraint-based modeling, SDG 3 – Gesundheit und Wohlergehen, metabolic networks, Humans, mixed-integer linear programming, 106005 Bioinformatics, metabolic engineering, robustness and fragility, Metabolic Networks and Pathways, Algorithms
Access URL: https://pubmed.ncbi.nlm.nih.gov/40263955
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7
Authors:
Source: Proceedings of the National Academy of Sciences of the United States of America. 119(4)
Subject Terms: Proteome constraint, Constraint-based modeling, Saccharomyces cerevisiae, Amino acid biosynthetic cost, Metabolic engineering
File Description: electronic
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8
Authors:
Source: Molecules, Vol 30, Iss 15, p 3200 (2025)
Subject Terms: constraint-based modeling, cancer metabolism, drug target discovery, biomarker identification, fuzzy optimization, nested hybrid differential evolution, Organic chemistry, QD241-441
File Description: electronic resource
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9
Authors: et al.
Source: Proceedings of the National Academy of Sciences of the United States of America. 118(51)
Subject Terms: Constraint-based modeling, Proteomics, Systems biology, Yeast, Crabtree effect
File Description: electronic
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10
Authors: et al.
Source: Quantitative Biology. 11(4):363-375
Subject Terms: constraint-based modeling, genome-scale metabolic model, disease, metabolism
File Description: electronic
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11
Authors: et al.
Source: Frontiers in Bioengineering and Biotechnology. 8
Subject Terms: constraint-based modeling, cyanide, genome-scale metabolic model, chemically-defined medium, bioleaching
File Description: electronic
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12
Authors: et al.
Source: Journal of Inherited Metabolic Disease, 46 (3)
Subject Terms: 0301 basic medicine, 0303 health sciences, Mitochondrial Diseases, Methylmalonyl-CoA Mutase, rare disease, methylmalonic aciduria, constraint-based modeling, CRISPR-Cas9, metabolism, 03 medical and health sciences, HEK293 Cells, Humans, Amino Acid Metabolism, Inborn Errors, Methylmalonic Acid
File Description: application/application/pdf
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13
Authors:
Source: Journal of King Saud University: Computer and Information Sciences, Vol 36, Iss 6, Pp 102120- (2024)
Subject Terms: In silico metabolic engineering, Metabolic networks, Gene regulatory networks, Constraint-based modeling, Strain optimization, Electronic computers. Computer science, QA75.5-76.95
File Description: electronic resource
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14
Authors: et al.
Contributors: et al.
Source: Microbiol Spectr
Microbiology Spectrum, Vol 12, Iss 6 (2024)
MICROBIOLOGY SPECTRUMSubject Terms: flux variability analysis, Cystic Fibrosis, flux balance analysis, Modellierung, Microbiology, Mathematische Modellierung, SBML, cystic fibrosis, Gram-positive, Mice, ATCC 25296, Systembiologie, Mukoviszidose, antimicrobial strategies, genome-scale metabolic model, Humans, Animals, Stoffwechsel, Genes, Essential, Genom, lung infections, mathematical network, Biology and Life Sciences, QR1-502, pathway analysis, 3. Good health, Metabolismus, Rothia mucilaginosa DSM20746, Metabolism, Phenotype, constraint-based modeling, iRM23NL, ddc:570, metabolic engineering, nasal microbiome, Genome, Bacterial, Research Article, Micrococcaceae
File Description: application/pdf
Access URL: https://pubmed.ncbi.nlm.nih.gov/38652457
https://doaj.org/article/d04d9a88b23d4e7eaea4c85ab362a6b5
https://biblio.ugent.be/publication/01HYG2Y6C49T1FCQ4FF4QDVZMY/file/01HYG30V7Z1RQ7AQ2QANEXQSRT
http://hdl.handle.net/1854/LU-01HYG2Y6C49T1FCQ4FF4QDVZMY
http://doi.org/10.1128/spectrum.04006-23
https://biblio.ugent.be/publication/01HYG2Y6C49T1FCQ4FF4QDVZMY -
15
Authors:
Source: BMC Bioinformatics, Vol 24, Iss 1, Pp 1-25 (2023)
Subject Terms: Flux balance analysis, Genome-scale metabolic model, Constraint-based modeling, Drug discovery, Hybrid differential evolution, Multi-level optimization, Computer applications to medicine. Medical informatics, R858-859.7, Biology (General), QH301-705.5
File Description: electronic resource
Relation: https://doaj.org/toc/1471-2105
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16
Authors: et al.
Source: Frontiers in Microbiology, Vol 15 (2024)
Subject Terms: systems microbiology, microbial ecology, omics data integration, human microbiome, genome-scale modeling, constraint-based modeling, Microbiology, QR1-502
File Description: electronic resource
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17
Authors: et al.
Source: Proceedings of the National Academy of Sciences of the United States of America. 115(44)
Subject Terms: Genetics, Affordable and Clean Energy, Biological Evolution, Biomass, Biosynthetic Pathways, Databases, Genetic, Genome, Metabolic Networks and Pathways, Phylogeny, Thermodynamics, thermodynamics, metabolism, evolution, constraint based modeling, constraint-based modeling
File Description: application/pdf
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18
Authors: et al.
Source: Frontiers in Physiology. 9
Subject Terms: systems biology, gene essentiality, reaction essentiality, genome-scale metabolic models, constraint-based modeling
File Description: electronic
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19
Authors: et al.
Subject Terms: Synechococcus, Oxygen, Butylene Glycols, Chlorophyll, Pigmentation, Acclimatization, Photosynthesis, Energy Metabolism, Genome, Light, Computer Simulation, Metabolic Engineering, Metabolic Flux Analysis, Constraint based modeling, Cyanobacteria engineering, Flux balance analysis, Genome-scale modeling, Synechococcus elongatus, Bioengineering, Affordable and Clean Energy, Industrial Biotechnology, Biotechnology
File Description: application/pdf
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20
Authors: et al.
Source: FEBS Open Bio
FEBS Open Bio, Vol 11, Iss 8, Pp 2078-2094 (2021)Subject Terms: 0301 basic medicine, 03 medical and health sciences, QH301-705.5, constraint‐based modeling, flux balance analysis, cancer cell metabolism, trilevel optimization, Biology (General), tissue‐specific metabolic models, Research Articles, 3. Good health
Access URL: https://onlinelibrary.wiley.com/doi/pdfdirect/10.1002/2211-5463.13231
https://pubmed.ncbi.nlm.nih.gov/34137202
https://doaj.org/article/96bbf0b07f694e46b1d277993527ec0f
https://europepmc.org/article/MED/34137202
https://febs.onlinelibrary.wiley.com/doi/pdf/10.1002/2211-5463.13231
https://www.ncbi.nlm.nih.gov/pubmed/34137202
https://febs.onlinelibrary.wiley.com/doi/abs/10.1002/2211-5463.13231
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