Search Results - "Yoav Ram"

Author response: Template switching during DNA replication is a prevalent source of adaptive gene amplification

Authors: Julie N Chuong Nadav Ben Nun Ina Suresh et al.

Author response for 'Prestige bias in cultural evolutionary dynamics'

Authors: null Saar Egozi null Yoav Ram

Author response for 'A new perspective for mitigation of SARS-CoV-2 infection: priming the innate immune system for viral attack'

Authors: Marcus W. Feldman Oren Kolodny Yoav Ram et al.

Author response for 'Prestige bias in cultural evolutionary dynamics'

Authors: Saar Egozi Yoav Ram

Availability: https://doi.org/10.1098/rsos.230650/v3/response1

Estimating mutation rates under heterogeneous stress responses.

Authors: Lansch-Justen, Lucy El Karoui, Meriem Alexander, Helen K.

Source: PLoS Computational Biology; 5/28/2024, Vol. 20 Issue 5, p1-27, 27p

Subject Terms: ESCHERICHIA coli, MAXIMUM likelihood statistics, BACTERIAL population, BACTERIAL mutation, CELL division

Sustainable computational science: the ReScience initiative

Authors: Nicolas P. Rougier Konrad Hinsen Frédéric Alexandre et al.

Source: PeerJ Computer Science, Vol 3, p e142 (2017)

Subject Terms: Computational science, Open science, Publication, Reproducible, Replicable, Sustainable, Electronic computers. Computer science, QA75.5-76.95

File Description: electronic resource

Relation: https://peerj.com/articles/cs-142.pdf; https://peerj.com/articles/cs-142/; https://doaj.org/toc/2376-5992

Access URL: https://doaj.org/article/55a5db62f618401cbb64c77165d3988b

Little Peacemakers: Microbes Can Promote Nonviolent Conflict Resolution by Their Hosts.

Authors: Bendett, Yonatan Hadany, Lilach

Source: Ecology & Evolution (20457758); Apr2025, Vol. 15 Issue 4, p1-12, 12p

Subject Terms: NATURAL selection, CONFLICT management, AGGRESSION (Psychology), MATHEMATICAL models, MICROORGANISMS

Template switching during DNA replication is a prevalent source of adaptive gene amplification.

Authors: Chuong, Julie N. Nun, Nadav Ben Suresh, Ina et al.

Source: eLife; 2/3/2025, p1-28, 28p

Deep neural networks and humans both benefit from compositional language structure.

Authors: Galke, Lukas Ram, Yoav Raviv, Limor

Source: Nature Communications; 12/30/2024, Vol. 15 Issue 1, p1-13, 13p

Subject Terms: ARTIFICIAL neural networks, NATURAL language processing, LANGUAGE models, ARTIFICIAL intelligence, COGNITIVE psychology, RECURRENT neural networks

Adaptive social contact rates induce complex dynamics during epidemics.

Authors: Arthur, Ronan F. Jones, James H. Bonds, Matthew H. et al.

Source: PLoS Computational Biology; 2/10/2021, Vol. 17 Issue 2, p1-17, 17p, 2 Charts, 4 Graphs

Subject Terms: SOCIAL contact, SOCIAL adjustment, BEHAVIOR, EPIDEMICS, COVID-19 pandemic

Cognitive Plausibility in Natural Language Processing.

Authors: Beinborn, Lisa Hollenstein, Nora

Source: Synthesis Lectures on Human Language Technologies; 2024, piii-158, 162p

Git can facilitate greater reproducibility and increased transparency in science.

Authors: Ram, Karthik

Source: Source Code for Biology & Medicine; 2013, Vol. 8 Issue 1, Special section p1-8, 8p, 3 Color Photographs

Subject Terms: RESEARCH, SCIENCE publishing, CONFIDENTIAL communications, DISCLOSURE, CONFIDENTIAL records, INFORMATION sharing

Aneuploidy Can Be an Evolutionary Diversion on the Path to Adaptation.

Authors: Kohanovski, Ilia Pontz, Martin Zande, Pétra Vande et al.

Source: Molecular Biology & Evolution; Mar2024, Vol. 41 Issue 3, p1-12, 12p

Subject Terms: ANEUPLOIDY, BIOLOGICAL evolution, EVOLUTIONARY models, BAYESIAN field theory, SUPPLY & demand

How microscopic epistasis and clonal interference shape the fitness trajectory in a spin glass model of microbial long-term evolution.

Authors: Boffi, Nicholas M. Yipei Guo Rycroft, Chris H. et al.

Source: eLife; 2/20/2024, p1-25, 25p

Cultural transmission, networks, and clusters among Austronesian-speaking peoples.

Authors: Macdonald, Joshua C. Blanco-Portillo, Javier Feldman, Marcus W. et al.

Source: Evolutionary Human Sciences; 2024, Vol. 6, p1-20, 20p

Proportionality in Criminal Sentencing: A Cognitive Hypothesis.

Authors: Petrov, Philip

Source: Oxford Journal of Legal Studies; Spring2023, Vol. 43 Issue 1, p124-149, 26p

Subject Terms: CRIMINAL sentencing, COGNITIVE psychology, CRIMINAL law, PHILOSOPHY of mind, ETHICS

Geographic Terms: UNITED States

THE DESIGN OF EVOLUTIONARY ALGORITHMS: A COMPUTER SCIENCE PERSPECTIVE ON THE COMPATIBILITY OF EVOLUTION AND DESIGN: with Zachary Ardern, "The Contentious Compatibility of Evolution and Design: Introduction to the Book Symposium"; David H. Glass, "An Evaluation of the Biological Case for Design"; Meghan D. Page, "Thomist or Tumblrist: Comments on The Compatibility of Evolution and Design by E. V. R. Kojonen"; Peter Jeavons, "The Design of Evolutionary Algorithms: A Computer Science Perspective on the Compatibility of Evolution and Design"; Denis R. Alexander, "Evolution, Chance, Necessity, and Design"; Bethany N. Sollereder, "Response to The Compatibility of Evolution and Design "; Mats Wahlberg, "Divine Design and Evolutionary Evil"; and Erkki V. R. Kojonen, "Response: The Compatibility of Evolution and Design."

Authors: Jeavons, Peter

Source: Zygon: Journal of Religion & Science; Dec2022, Vol. 57 Issue 4, p1051-1068, 18p

Subject Terms: ALGORITHMS, BOOK design, COMPUTER science, EVOLUTIONARY algorithms, BIOLOGICAL evolution, GOOD & evil

Fitness Landscape Analysis of a tRNA Gene Reveals that the Wild Type Allele is Sub-optimal, Yet Mutationally Robust.

Authors: Gabzi, Tzahi Pilpel, Yitzhak Friedlander, Tamar

Source: Molecular Biology & Evolution; Sep2022, Vol. 39 Issue 9, p1-6, 6p

Subject Terms: VIRAL genomes, ALLELES, TRANSFER RNA, LANDSCAPES, GENES, MOLECULAR evolution

Estimation and worldwide monitoring of the effective reproductive number of SARS-CoV-2.

Authors: Huisman, Jana S. Scire, Jérémie Angst, Daniel C. et al.

Source: eLife; 8/8/2022, p1-48, 48p

PNAS Plus Significance Statements.

Source: Proceedings of the National Academy of Sciences of the United States of America; 2/6/2018, Vol. 115 Issue 6, p1145-1149, 5p

Subject Terms: WATER storage, ARTIFICIAL satellites, COLLOIDS, ELECTROPHORESIS, CLIMATOLOGY