Search Results - "Terminal restriction fragment length polymorphism data analysis"

Terminal Restriction Fragment Length Polymorphism Data Analysis for Quantitative Comparison of Microbial Communities

Authors: Blackwood, Christopher B., author Marsh, Terry, author Kim, Sang-Hoon, author et al.

Source: Applied and Environmental Microbiology. 69:926-932

Subject Terms: Crops, Agricultural, 2. Zero hunger, Bacteria, Statistics as Topic, Sensitivity and Specificity, Zea mays, molecular genetic technique, Bioreactors, statistical analysis, Data Interpretation, Statistical, environmental samples, Cluster Analysis, fluorescence baseline, Polymorphism, Restriction Fragment Length, Soil Microbiology, Medicago sativa

File Description: born digital; articles; application/pdf

Access URL: https://aem.asm.org/content/69/2/926.full.pdf
https://pubmed.ncbi.nlm.nih.gov/12571013
https://europepmc.org/article/MED/12571013
https://pubag.nal.usda.gov/catalog/1409902
http://drosophila.biology.kent.edu/users/cblackwo/pdfs/Blackwood_etal_2003_AEM.pdf
https://dialnet.unirioja.es/servlet/articulo?codigo=319771
https://lter.kbs.msu.edu/citations/2571

Terminal Restriction Fragment Length Polymorphism Data Analysis

Authors: Grant, Alastair Ogilvie, Lesley A. Blackwood, CB et al.

Source: Applied and Environmental Microbiology. 69:6342-6343

Subject Terms: 0301 basic medicine, 2. Zero hunger, 0303 health sciences, 03 medical and health sciences, C000 Biological and Biomedical Sciences, 14. Life underwater, 15. Life on land, 6. Clean water

Access URL: https://aem.asm.org/content/69/10/6342.full.pdf
https://research-portal.uea.ac.uk/en/publications/terminal-restriction-fragment-length-polymorphism-data-analysis
https://ueaeprints.uea.ac.uk/31152/
https://aem.asm.org/content/aem/69/10/6342.full.pdf
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC201242/
https://aem.asm.org/content/69/10/6342
http://europepmc.org/articles/PMC201242

Tools for T-RFLP data analysis using Excel

Authors: Fredriksson, Nils J Hermansson, Malte Wilén, Britt-Marie

Source: BMC Bioinformatics. 15

Subject Terms: Molecular Biology, Molekylärbiologi, Terminal restriction fragment length polymorphism data analysis, Microbial ecology

File Description: electronic

Access URL: https://gup.ub.gu.se/publication/208163
https://gup.ub.gu.se/publication/208163

Terminal restriction fragment length polymorphism data analysis

Authors: Grant, A. Ogilvie, Lesley

Source: Grant, A & Ogilvie, L 2003, 'Terminal restriction fragment length polymorphism data analysis', Applied and Environmental Microbiology, vol. 69, no. 10, pp. 6342-6343.

Relation: info:eu-repo/semantics/altIdentifier/pissn/0099-2240; info:eu-repo/semantics/altIdentifier/eissn/1098-5336

Availability: https://research.brighton.ac.uk/en/publications/481abf7a-568d-43df-a37e-038ff7ba4c47

Tools for T-RFLP data analysis using Excel

Authors: Fredriksson, Nils Hermansson, Malte Wilén, Britt-Marie

Subject Terms: Terminal restriction fragment length polymorphism data analysis, Microbial ecology, DNA-fingerprinting

Relation: http://www.biomedcentral.com/1471-2105/15/361

Availability: http://www.biomedcentral.com/1471-2105/15/361

Chronic Rhinosinusitis—Microbiological Etiology, Potential Genetic Markers, and Diagnosis.

Authors: Michalik, Michał Krawczyk, Beata

Source: International Journal of Molecular Sciences; Mar2024, Vol. 25 Issue 6, p3201, 29p

Subject Terms: SINUSITIS, INFLAMMATION, DIAGNOSIS, MUCOCILIARY system, ETIOLOGY of diseases, GENETIC markers

Exploring Bacterial Diversity: How Far Have We Reached?

Authors: Pandey, Himani Lal, Devi

Source: Advancements of Microbiology; Nov2023, Vol. 62 Issue 3/4, p117-131, 15p

Subject Terms: BACTERIAL diversity, BACTERIAL communities, AGAR, METAGENOMICS, DIGESTION, DILUTION

Microbial community succession patterns and drivers of Luxiang-flavor Jiupei during long fermentation.

Authors: Xiaogang Liu Dongna Ma Chen Yang et al.

Source: Frontiers in Microbiology; 2/10/2023, Vol. 14, p1-13, 13p, 1 Color Photograph, 5 Graphs

Use of polymerase chain reactions to detect Mycoplasma gallisepticum, Mycoplasma imitans, Mycoplasma iowae, Mycoplasma meleagridis and Mycoplasma synoviae in birds of prey.

Authors: Lierz, M. Hagen, N. Lueschow, D. et al.

Source: Avian Pathology. Oct2008, Vol. 37 Issue 5, p471-476. 6p. 2 Black and White Photographs, 4 Charts.

Occurrence of mycoplasmas in semen samples of birds of prey.

Authors: Lierz, M. Hafez, H. M.

Source: Avian Pathology. Oct2008, Vol. 37 Issue 5, p495-497. 3p. 1 Chart.

The combined effects of soya isoflavones and resistant starch on equol production and trabecular bone loss in ovariectomised mice.

Authors: Yuko Tousen Yu Matsumoto Chiho Matsumoto et al.

Source: British Journal of Nutrition; 7/28/2016, Vol. 116 Issue 2, p247-257, 11p

Subject Terms: BONE physiology, GUT microbiota, ANIMAL experimentation, BONE marrow, BONE resorption, COMPARATIVE studies, DIETARY supplements, GENE expression, GLUCANS, OVARIECTOMY, RATS, ISOFLAVONES, BONE density

Effect of dietary components on the gut microbiota of aquatic animals. A never-ending story?

Authors: Ringø, E. Zhou, Z. Vecino, J.L.G. et al.

Source: Aquaculture Nutrition; Apr2016, Vol. 22 Issue 2, p219-282, 64p

Subject Terms: AQUATIC animals -- Food, DIETARY supplements, GUT microbiota, AQUATIC animals, WARM-blooded animals, MICROVILLI, HEALTH

The influence of site and season on the gut and pallial fluid microbial communities of the eastern oyster, Crassostrea virginica (Bivalvia, Ostreidae): community-level physiological profiling and genetic structure.

Authors: Pierce, Melissa Ward, J. Holohan, Bridget et al.

Source: Hydrobiologia; Feb2016, Vol. 765 Issue 1, p97-113, 17p, 6 Charts, 5 Graphs

Subject Terms: AMERICAN oyster, BIOTIC communities, MARINE bacteria, BACTERIAL genetics, SPECIES diversity

Using Terminal Restriction Fragment Length Polymorphism (T-RFLP) Analysis to Assess Microbial Community Structure in Compost Systems.

Authors: Tiquia, Sonia M.

Source: Bioremediation (9781607614401); 2010, p89-102, 14p

CHAPTER 41: Analysis of Microbial Communities with Denaturing Gradient Gel Electrophoresis and Terminal Restriction Fragment Length Polymorphism.

Authors: NAKATSU, CINDY H. MARSH, TERENCE L.

Source: Methods for General & Molecular Microbiology; 2007, p909-923, 15p

References.

Source: Soils: Basic Concepts & Future Challenges; 2006, p277-302, 26p

Comparison of soil microbial communities inhabiting vineyards and native sclerophyllous forests in central Chile.

Authors: Castañeda, Luis E. Godoy, Karina Manzano, Marlene et al.

Source: Ecology & Evolution (20457758); Sep2015, Vol. 5 Issue 18, p3857-3868, 12p

Subject Terms: SOIL microbial ecology, VINEYARDS, SCLEROPHYLLS, FORESTS & forestry, BIOMASS production, AGRICULTURAL management, RESTRICTION fragment length polymorphisms

Geographic Terms: CHILE

Dissimilar bacterial and fungal decomposer communities across rich to poor fen peatlands exhibit functional redundancy.

Alternate Title: Redondance fonctionnelle des populations de bactéries et de champignons assurant la décomposition dans les riches à pauvres tourbières de carex. (French)

Authors: Haynes, Kristine M. Preston, Michael D. McLaughlin, James W. et al.

Source: Canadian Journal of Soil Science; Aug2015, Vol. 95 Issue 3, p219-230, 12p

Subject Terms: PEATLAND management, WETLAND management, PEATLAND restoration, RESPIRATION, SUBSTRATES (Materials science)

Sediment prokaryote communities in different sites of eutrophic Lake Taihu and their interactions with environmental factors.

Authors: Chen, Nan Yang, Jin-Shui Qu, Jiang-Hang et al.

Source: World Journal of Microbiology & Biotechnology; Jun2015, Vol. 31 Issue 6, p883-896, 14p

Subject Terms: PROKARYOTES, ALGAE, LAKES, BIOINDICATORS, ALGAL blooms, PYROSEQUENCING

Effects of Elevated Atmospheric CO on Microbial Community Structure at the Plant-Soil Interface of Young Beech Trees ( Fagus sylvatica L.) Grown at Two Sites with Contrasting Climatic Conditions.

Authors: Gschwendtner, Silvia Leberecht, Martin Engel, Marion et al.

Source: Microbial Ecology; May2015, Vol. 69 Issue 4, p867-878, 12p

Subject Terms: SOIL microbial ecology, FOREST management, FOREST soils, FORESTS & forestry, FUNGI