Search Results - "Stochastic simulation algorithms"

Extension of Leap Condition in Approximate Stochastic Simulation Algorithms of Biological Networks

Authors: Saliha DEMİRBÜKEN Vilda PURUTCUOGLU

Source: Volume: 14, Issue: 2 366-375
Turkish Journal of Mathematics and Computer Science

Subject Terms: Matematik, 0103 physical sciences, Approximate stochastic simulation algorithms, leap condition, confidence interval, 0101 mathematics, 01 natural sciences, Mathematical Sciences

File Description: application/pdf

Access URL: https://dergipark.org.tr/tr/pub/tjmcs/issue/74092/901339

Chapter 6 Approximate stochastic simulation algorithms

Authors: Saliha Demirbüken Vilda Purutçuoğlu

Source: Smart Green Energy Production ISBN: 9783110717655

Stochastic Simulation Algorithms for Iterative Solution of the Lamé Equation

Authors: I. A. Aksyuk A. E. Kireeva K. K. Sabelfeld et al.

Source: Numerical Analysis and Applications. 16:299-316

АЛГОРИТМЫ СТОХАСТИЧЕСКОГО МОДЕЛИРОВАНИЯ ДЛЯ ИТЕРАЦИОННОГО РЕШЕНИЯ УРАВНЕНИЯ ЛАМЕ: STOCHASTIC SIMULATION ALGORITHMS FOR ITERATIVE SOLUTION OF THE LAMè EQUATION

Source: Сибирский журнал вычислительной математики. 26:357-377

Recent advances in stochastic simulation algorithms create opportunities to study new ecological and eco‐evolutionary problems

Authors: Misha T. Kummel David A. Vasseur

Source: Oikos. 2025

Subject Terms: 0106 biological sciences, 0301 basic medicine, 03 medical and health sciences, 01 natural sciences

A Study on the Usefulness of Stochastic Simulation Algorithms for Teaching and Learning in College Physical Education Classrooms

Authors: Ju Xu

Source: Mathematical Problems in Engineering. 2022:1-6

Subject Terms: 03 medical and health sciences, 0302 clinical medicine, 4. Education, 05 social sciences, 0503 education

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Stochastic Simulation Algorithms for Solving Transient Anisotropic Diffusion-recombination Equations and Application to Cathodoluminescence Imaging

Authors: Karl K. Sabelfeld Anastasia E. Kireeva

Source: Methodology and Computing in Applied Probability. 24:3029-3048

Subject Terms: 0101 mathematics, 01 natural sciences

Retracted: A Study on the Usefulness of Stochastic Simulation Algorithms for Teaching and Learning in College Physical Education Classrooms

Authors: Engineering, Mathematical Problems in

Source: Mathematical Problems in Engineering. 2023

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Extension of Leap Condition in Approximate Stochastic Simulation Algorithms of Biological Networks with 2nd and 3rd order Taylor Expansion

Authors: PURUTÇUOĞLU, VİLDA Demirbüken, Saliha

Source: Springer Proceedings in Mathematics & Statistics ISBN: 9783030964009

Access URL: https://avesis.kocaeli.edu.tr/publication/details/8962e2e5-74e4-463e-ab0e-29d403390c2c/oai

Handling Dynamic Sets of Reactions in Stochastic Simulation Algorithms

Authors: Till Köster Adelinde M. Uhrmacher

Source: Proceedings of the 2018 ACM SIGSIM Conference on Principles of Advanced Discrete Simulation. :161-164

Subject Terms: 0206 medical engineering, 0202 electrical engineering, electronic engineering, information engineering, 02 engineering and technology

Access URL: https://dl.acm.org/doi/10.1145/3200921.3200943
http://eprints.mosi.informatik.uni-rostock.de/522/
https://dblp.uni-trier.de/db/conf/pads/pads2018.html#KosterU18

Slow update stochastic simulation algorithms for modeling complex biochemical networks

Authors: Debraj Ghosh Rajat K. De

Source: Biosystems. 162:135-146

Subject Terms: Stochastic Processes, Biochemical Phenomena, 0103 physical sciences, Computational Biology, Reproducibility of Results, Computer Simulation, 02 engineering and technology, 0210 nano-technology, Models, Biological, 01 natural sciences, Algorithms

Access URL: https://pubmed.ncbi.nlm.nih.gov/29080799
https://www.sciencedirect.com/science/article/pii/S0303264716302696
https://pubmed.ncbi.nlm.nih.gov/29080799/
https://www.ncbi.nlm.nih.gov/pubmed/29080799
https://dblp.uni-trier.de/db/journals/biosystems/biosystems162.html#GhoshD17
https://doi.org/10.1016/j.biosystems.2017.10.011

Approximate stochastic simulation algorithms

Authors: Demirbüken, Saliha Purutçuoğlu Gazi, Vilda

Relation: Smart Green Energy Production; https://hdl.handle.net/11511/113682

Availability: https://hdl.handle.net/11511/113682

Stochastic simulation algorithms for Interacting Particle Systems.

Authors: Timothy C Stutz Alfonso Landeros Jason Xu et al.

Source: PLoS ONE, Vol 16, Iss 3, p e0247046 (2021)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/c4659dffb64c4ee0a64381b28271be0c

Prediction of NOx emissions from a simplified biodiesel surrogate by applying stochastic simulation algorithms (SSA)

Authors: Dong-Shik Kim Ashok Kumar Hamid Omidvarborna

Source: Combustion Theory and Modelling. 21:346-357

Subject Terms: 0202 electrical engineering, electronic engineering, information engineering, 02 engineering and technology, 0204 chemical engineering, 7. Clean energy

Access URL: http://ui.adsabs.harvard.edu/abs/2017CTM....21..346O/abstract
https://www.tandfonline.com/doi/full/10.1080/13647830.2016.1235729

Predicting ecological system dynamics with stochastic simulation algorithms

Authors: Haring, Verena

Fast Exact Stochastic Simulation Algorithms Using Partial Propensities

Authors: Rajesh Ramaswamy Ivo F. Sbalzarini Theodore E. Simos et al.

Contributors: Rajesh Ramaswamy Ivo F. Sbalzarini Theodore E. Simos et al.

Source: AIP Conference Proceedings. :1338-1341

Subject Terms: 03 medical and health sciences, 0302 clinical medicine, SX00 SystemsX.ch, SX15 WingX, 0103 physical sciences, 570 Life sciences, biology, 01 natural sciences, 3100 General Physics and Astronomy

File Description: 1.3497968.pdf - application/pdf

Access URL: https://www.zora.uzh.ch/id/eprint/79209/1/1.3497968.pdf
https://www.zora.uzh.ch/id/eprint/79209/
https://core.ac.uk/display/16487342
http://ui.adsabs.harvard.edu/abs/2010AIPC.1281.1338R/abstract
https://aip.scitation.org/doi/10.1063/1.3497968
https://publications.mpi-cbg.de/Ramaswamy_2010_5168.pdf
https://www.zora.uzh.ch/id/eprint/79209/
https://doi.org/10.5167/uzh-79209

Stochastic simulation algorithms for computational systems biology: Exact, approximate, and hybrid methods

Authors: Corrado Priami Giulia Simoni Luca Marchetti et al.

Source: WIREs Systems Biology and Medicine. 11

Subject Terms: 0301 basic medicine, Models of Systems Properties and Processes > Mechanistic Models Analytical and Computational Methods > Computational Methods, Sphingolipids, computational, Systems Biology, systems biology, hybrid stochastic simulation, Ceramides, Models, Biological, 01 natural sciences, stochastic simulation, 3. Good health, 03 medical and health sciences, 0103 physical sciences, Animals, Humans, Computer Simulation, Algorithms

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Access URL: https://pubmed.ncbi.nlm.nih.gov/31260191
https://onlinelibrary.wiley.com/doi/abs/10.1002/wsbm.1459
https://pubmed.ncbi.nlm.nih.gov/31260191/
https://www.ncbi.nlm.nih.gov/pubmed/31260191
https://wires.onlinelibrary.wiley.com/doi/10.1002/wsbm.1459
https://europepmc.org/article/MED/31260191
https://hdl.handle.net/11568/994817
https://doi.org/10.1002/wsbm.1459

Interactive visual exploration of simulator accuracy: A case study for stochastic simulation algorithms

Authors: Heidrun Schumann Adelinde M. Uhrmacher Roland Ewald et al.

Source: Proceedings Title: Proceedings of the 2012 Winter Simulation Conference (WSC). :1-12

Subject Terms: 0103 physical sciences, 0202 electrical engineering, electronic engineering, information engineering, 02 engineering and technology, 01 natural sciences

Access URL: http://www.informs-sim.org/wsc12papers/includes/files/inv113.pdf
https://dblp.uni-trier.de/db/conf/wsc/wsc2012.html#LuboschikRESSU12
https://doi.org/10.1109/WSC.2012.6465190
https://ieeexplore.ieee.org/document/6465190/
http://dblp.uni-trier.de/db/conf/wsc/wsc2012.html#LuboschikRESSU12
http://ieeexplore.ieee.org/document/6465190/

Exploring the performance of spatial stochastic simulation algorithms

Authors: Roland Ewald Adelinde M. Uhrmacher Matthias Jeschke

Source: Journal of Computational Physics. 230:2562-2574

Subject Terms: 0103 physical sciences, 0206 medical engineering, 02 engineering and technology, 01 natural sciences

Access URL: https://dblp.uni-trier.de/db/journals/jcphy/jcphy230.html#JeschkeEU11
https://dl.acm.org/doi/10.1016/j.jcp.2010.12.030
https://doi.org/10.1016/j.jcp.2010.12.030
https://ui.adsabs.harvard.edu/abs/2011JCoPh.230.2562J/abstract
https://www.sciencedirect.com/science/article/pii/S0021999110007047

D-leaping: Accelerating stochastic simulation algorithms for reactions with delays

Authors: Bayati, B Chatelain, P Koumoutsakos, P et al.

Contributors: Bayati, B Chatelain, P Koumoutsakos, P et al.

Source: Journal of Computational Physics. 228:5908-5916

Subject Terms: SX20 Research, Technology and Development Projects, leaping, Stochastic simulation, 02 engineering and technology, 01 natural sciences, 3100 General Physics and Astronomy, Delayed reactions, SX00 SystemsX.ch, 2604 Applied Mathematics, SX15 WingX, 0103 physical sciences, 1706 Computer Science Applications, 570 Life sciences, biology, 3101 Physics and Astronomy (miscellaneous), Tau, 0210 nano-technology, 2612 Numerical Analysis, 2605 Computational Mathematics, 2611 Modeling and Simulation

Access URL: https://core.ac.uk/display/11273567
http://www.osti.gov/scitech/biblio/21308107-leaping-accelerating-stochastic-simulation-algorithms-reactions-delays
http://dblp.uni-trier.de/db/journals/jcphy/jcphy228.html#BayatiCK09
https://www.sciencedirect.com/science/article/pii/S0021999109002435
https://dblp.uni-trier.de/db/journals/jcphy/jcphy228.html#BayatiCK09
https://dial.uclouvain.be/pr/boreal/object/boreal:71076
https://www.zora.uzh.ch/id/eprint/39868/
https://doi.org/10.5167/uzh-39868