Suchergebnisse - "RNA Sequencing Data Analysis"

Identification and validation of T cell senescence-related prognostic genes in gastric carcinoma and investigation of their potential regulatory mechanisms

Autoren: Jing Liu Huiyu Wang Fang Huang et al.

Quelle: Discover Oncology, Vol 16, Iss 1, Pp 1-17 (2025)

Schlagwörter: Gastric carcinoma, Immunosenescence, Prognostic genes, Risk model, Single cell RNA sequencing data analysis, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

Dateibeschreibung: electronic resource

Relation: https://doaj.org/toc/2730-6011

Zugangs-URL: https://doaj.org/article/5abc40a0c40942ecaf5965ccd7d44ba1

Phylogenomics and the rise of the angiosperms

Autoren: Alexandre R. Zuntini Tom Carruthers Olivier Maurin et al.

Weitere Verfasser: Alexandre R. Zuntini Tom Carruthers Olivier Maurin et al.

Quelle: Nature
Dipòsit Digital de Documents de la UAB
Universitat Autònoma de Barcelona
Digital.CSIC. Repositorio Institucional del CSIC
Consejo Superior de Investigaciones Científicas (CSIC)
NATURE
Zuntini, A R, Carruthers, T, Maurin, O, Bailey, P C, Leempoel, K, Brewer, G E, Epitawalage, N, Françoso, E, Gallego-Paramo, B, McGinnie, C, Negrão, R, Roy, S R, Simpson, L, Toledo Romero, E, Barber, V M A, Botigué, L, Clarkson, J J, Cowan, R S, Dodsworth, S, Johnson, M G, Kim, J T, Pokorny, L, Wickett, N J, Antar, G M, DeBolt, L, Gutierrez, K, Hendriks, K P, Hoewener, A, Hu, A Q, Joyce, E M, Kikuchi, I A B S, Larridon, I, Larson, D A, de Lírio, E J, Liu, J X, Malakasi, P, Przelomska, N A S, Shah, T, Viruel, J, Allnutt, T R, Ameka, G K, Andrew, R L, Appelhans, M S, Arista, M, Ariza, M J, Arroyo, J, Arthan, W, Bachelier, J B, Bailey, C D, Barnes, H F, Barrett, M D, Barrett, R L, Bayer, R J, Bayly, M J, Biffin, E, Biggs, N, Birch, J L, Bogarín, D, Borosova, R, Bowles, A M C, Boyce, P C, Bramley, G L C, Briggs, M, Broadhurst, L, Brown, G K, Bruhl, J J, Bruneau, A, Buerki, S, Burns, E, Byrne, M, Cable, S, Calladine, A, Callmander, M W, Cano, Á, Cantrill, D J, Cardinal-McTeague, W M, Carlsen, M M, Carruthers, A J A, de Castro Mateo, A, Chase, M W, Chatrou, L W, Cheek, M, Chen, S, Christenhusz, M J M, Christin, P A, Clements, M A, Coffey, S C, Conran, J G, Cornejo, X, Couvreur, T L P, Cowie, I D, Csiba, L, Darbyshire, I, Davidse, G, Davies, N M J, Davis, A P, van Dijk, K J, Downie, S R, Duretto, M F, Duvall, M R, Edwards, S L, Eggli, U, Erkens, R H J, Escudero, M, de la Estrella, M, Fabriani, F, Fay, M F, Ferreira, P D L, Ficinski, S Z, Fowler, R M, Frisby, S, Fu, L, Fulcher, T, Galbany-Casals, M, Gardner, E M, German, D A, Giaretta, A, Gibernau, M, Gillespie, L J, González, C C, Goyder, D J, Graham, S W, Grall, A, Green, L, Gunn, B F, Gutiérrez, D G, Hackel, J, Haevermans, T, Haigh, A, Hall, J C, Hall, T, Harrison, M J, Hatt, S A, Hidalgo, O, Hodkinson, T R, Holmes, G D, Hopkins, H C F, Jackson, C J, James, S A, Jobson, R W, Kadereit, G, Kahandawala, I M, Kainulainen, K, Kato, M, Kellogg, E A, King, G J, Klejevskaja, B, Klitgaard, B B, Klopper, R R, Knapp, S, Koch, M A, Leebens-Mack, J H, Lens, F, Leon, C J, Léveillé-Bourret, É, Lewis, G P, Li, D Z, Li, L, Liede-Schumann, S, Livshultz, T, Lorence, D, Lu, M, Lu-Irving, P, Luber, J, Lucas, E J, Luján, M, Lum, M, Macfarlane, T D, Magdalena, C, Mansano, V F, Masters, L E, Mayo, S J, McColl, K, McDonnell, A J, McDougall, A E, McLay, T G B, McPherson, H, Meneses, R I, Merckx, V S F T, Michelangeli, F A, Mitchell, J D, Monro, A K, Moore, M J, Mueller, T L, Mummenhoff, K, Munzinger, J, Muriel, P, Murphy, D J, Nargar, K, Nauheimer, L, Nge, F J, Nyffeler, R, Orejuela, A, Ortiz, E M, Palazzesi, L, Peixoto, A L, Pell, S K, Pellicer, J, Penneys, D S, Perez-Escobar, O A, Persson, C, Pignal, M, Pillon, Y, Pirani, J R, Plunkett, G M, Powell, R F, Prance, G T, Puglisi, C, Qin, M, Rabeler, R K, Rees, P E J, Renner, M, Roalson, E H, Rodda, M, Rogers, Z S, Rokni, S, Rutishauser, R, de Salas, M F, Schaefer, H, Schley, R J, Schmidt-Lebuhn, A, Shapcott, A, Al-Shehbaz, I, Shepherd, K A, Simmons, M P, Simões, A O, Simões, A R G, Siros, M, Smidt, E C, Smith, J F, Snow, N, Soltis, D E, Soltis, P S, Soreng, R J, Sothers, C A, Starr, J R, Stevens, P F, Straub, S C K, Struwe, L, Taylor, J M, Telford, I R H, Thornhill, A H, Tooth, I, Trias-Blasi, A, Udovicic, F, Utteridge, T M A, Del Valle, J C, Verboom, G A, Vonow, H P, Vorontsova, M S, de Vos, J M, Al-Wattar, N, Waycott, M, Welker, C A D, White, A J, Wieringa, J J, Williamson, L T, Wilson, T C, Wong, S Y, Woods, L A, Woods, R, Worboys, S, Xanthos, M, Yang, Y, Zhang, Y X, Zhou, M Y, Zmarzty, S, Zuloaga, F O, Antonelli, A, Bellot, S, Crayn, D M, Grace, O M, Kersey, P J, Leitch, I J, Sauquet, H, Smith, S A, Eiserhardt, W L, Forest, F & Baker, W J 2024, 'Phylogenomics and the rise of the angiosperms', Nature, vol. 629, no. 8013, pp. 843-850. https://doi.org/10.1038/s41586-024-07324-0
De Lima Ferreira, P 2024, ' Phylogenomics and the rise of the angiosperms ', Nature . https://doi.org/10.1038/s41586-024-07324-0

Schlagwörter: Clade, 3104 Evolutionary Biology, Speciation, Genome Evolution and Polyploidy in Plants, 3705 Geology, Evolutionary biology, Plant Science, Gene, Biochemistry, Agricultural and Biological Sciences, Plant evolution, anzsrc-for: 31 Biological Sciences, Phylogeny, Ecology, ORIGIN, Fossils, PENALIZED LIKELIHOOD, Nuclear Proteins, Life Sciences, Phylogenomics, anzsrc-for: 37 Earth Sciences, anzsrc-for: 3705 Geology, Phylogenetic Analysis, Genomics, Evolution and Classification of Flowering Plants, Phylogenetics, TREES, DIVERSIFICATION, Evolution, Genes, Plant, Article, DIVERGENCE TIMES, anzsrc-for: 3104 Evolutionary Biology, Evolution, Molecular, Magnoliopsida, Biochemistry, Genetics and Molecular Biology, Tree of life (biology), RATES, 14. Life underwater, phylogenetic tree, PLANT, RNA Sequencing Data Analysis, Platypus, Molecular Biology, Biology, Ecology, Evolution, Behavior and Systematics, Gymnosperm, Molecular, Biology and Life Sciences, Paleontology, 37 Earth Sciences, Plant, 500 Naturwissenschaften und Mathematik::570 Biowissenschaften, Biologie::570 Biowissenschaften, Biologie, 15. Life on land, EVOLUTION, [SDE.BE] Environmental Sciences/Biodiversity and Ecology, Genes, FOS: Biological sciences, Angiosperm Phylogeny, [SDE.BE]Environmental Sciences/Biodiversity and Ecology, 31 Biological Sciences, Phylogenetic tree

Dateibeschreibung: application/pdf; text/xml; application/zip

Zugangs-URL: https://pubmed.ncbi.nlm.nih.gov/38658746
http://hdl.handle.net/10261/359084
https://ddd.uab.cat/record/296860
https://resolver.sub.uni-goettingen.de/purl?gro-2/143099
http://hdl.handle.net/10141/623159
https://www.repository.cam.ac.uk/handle/1810/368823
https://doi.org/10.1038/s41586-024-07324-0
http://hdl.handle.net/1854/LU-01HWBD2A2G3GGQV64QS4B88W52
http://doi.org/10.1038/s41586-024-07324-0
https://biblio.ugent.be/publication/01HWBD2A2G3GGQV64QS4B88W52/file/01HYH7V35H71NW97BAP9V4FK5S
https://biblio.ugent.be/publication/01HWBD2A2G3GGQV64QS4B88W52

An update on the taxonomy and functional properties of the probiotic Enterococcus faecium SF68

Autoren: Charles M. A. P. Franz Bruno Pot María Guadalupe Vizoso-Pinto et al.

Quelle: Beneficial Microbes. 15:211-225

Schlagwörter: ENTEROCOCCUS FAECIUM, Bacteriocin, Enterococcus faecium, FOS: Health sciences, Probiotic, Microbiology, Gene, Agricultural and Biological Sciences, Bacteriocins, Antibiotics, Biochemistry, Genetics and Molecular Biology, Antibiosis, Health Sciences, Escherichia coli, Genetics, Humans, RNA Sequencing Data Analysis, Molecular Biology, Biology, Phylogeny, Bacteria, Probiotics, PROBIOTIC, SF68, Probiotics and Prebiotics, Lactobacillus sakei, Life Sciences, Lactic acid, Listeria monocytogenes, 3. Good health, Lactococcus lactis, Lactobacillus, Infectious Diseases, Multigene Family, FOS: Biological sciences, Methicillin-Resistant Staphylococcus aureus Infections, Medicine, Antimicrobial, ENTEROCOCCUS LACTIS, HT29 Cells, Enterococcus, Plasmids, Food Science

Dateibeschreibung: application/pdf

Zugangs-URL: https://pubmed.ncbi.nlm.nih.gov/38688481
http://hdl.handle.net/11336/261975

Limited interspecific gene flow in the evolutionary history of the icefish genus Chionodraco

Autoren: Schiavon, Luca Ceballos, Santiago G Matschiner, Michael et al.

Quelle: CONICET Digital (CONICET)
Consejo Nacional de Investigaciones Científicas y Técnicas

Schlagwörter: INCOMPLEATE LINEAGE SORTING, introgression, Evolutionary biology, Gene, Evolutionsbiologi, Biochemistry, Genetics and Molecular Biology, Genetics, Genetic variation, 14. Life underwater, RNA Sequencing Data Analysis, Southern Ocean, hybridization, Molecular Biology, Biology, Evolutionary Biology, Genus, Ecology, INTROGRESSION, incomplete lineage sorting, notothenioidei, RADseq, Life Sciences, HIBRIDIZATION, NOTOTHENIOIDEI, Phylogenetic Analysis, Gene flow, DNA Barcoding for Food Authentication and Fraud Detection, Interspecific competition, 13. Climate action, FOS: Biological sciences, Population Genetic Structure and Dynamics, Zoology

Dateibeschreibung: application/pdf

Zugangs-URL: https://hdl.handle.net/20.500.14243/514187
https://doi.org/10.1093/icesjms/fsae019
http://hdl.handle.net/11336/232757
http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-541157

Improving the second-tier classification of methylmalonic acidemia patients using a machine learning ensemble method

Autoren: Zhixing Zhu Georgi Z. Genchev Yanmin Wang et al.

Quelle: World J Pediatr

Schlagwörter: Male, Artificial intelligence, Linear discriminant analysis, False positive paradox, Feature (linguistics), Clinical Biochemistry, Receiver operating characteristic, Pattern recognition (psychology), Sensitivity and Specificity, Machine Learning, Neonatal Screening, Tandem Mass Spectrometry, Biochemistry, Genetics and Molecular Biology, Ensemble learning, Machine learning, Humans, False positive rate, RNA Sequencing Data Analysis, Amino Acid Metabolism, Inborn Errors, Molecular Biology, Internal medicine, Inborn Errors of Metabolism, Infant, Newborn, Life Sciences, Quality Assessment, Linguistics, Computer science, Advances in Metabolomics Research, FOS: Philosophy, ethics and religion, 3. Good health, Philosophy, Methylmalonic acidemia, sequence alignment, Feature selection, Gradient boosting, FOS: Languages and literature, Medicine, Original Article, Female, Metabolic Disorders and Biochemical Genetics, metagenomics assembly, Random forest

Zugangs-URL: https://pubmed.ncbi.nlm.nih.gov/38401044

Assessing opportunities of SYCL for biological sequence alignment on GPU-based systems

Autoren: Manuel Costanzo Enzo Rucci Carlos García et al.

Weitere Verfasser: Manuel Costanzo Enzo Rucci Carlos García et al.

Quelle: Docta Complutense
instname

Schlagwörter: Parallel computing, Programmer, 0301 basic medicine, FOS: Computer and information sciences, Bioinformatics, 0206 medical engineering, GPU, CUDA, 02 engineering and technology, 03 medical and health sciences, Sequence alignment, Artificial Intelligence, Biochemistry, Genetics and Molecular Biology, 1203.17 Informática, RNA Sequencing Data Analysis, Molecular Biology, SYCL, 0303 health sciences, Computer Science - Programming Languages, Prediction of Protein Subcellular Localization, oneAPI, Protein, Life Sciences, DNA, Computer science, Programming language, 3. Good health, Computer Science - Distributed, Parallel, and Cluster Computing, Ciencias, Application of Genetic Programming in Machine Learning, Implementation, SYCLomatic, Computer Science, Physical Sciences, sequence alignment, Distributed, Parallel, and Cluster Computing (cs.DC), Software portability, Programming Languages (cs.PL)

Dateibeschreibung: application/pdf

Zugangs-URL: http://arxiv.org/abs/2211.10769
https://hdl.handle.net/20.500.14352/113792

The validity of Rana bannanica Rao & Yang, 1997 (Anura, Ranidae)

Autoren: Shuo Liu Tan Van Nguyen Nikolay A. Poyarkov et al.

Quelle: Herpetozoa, Vol 37, Iss, Pp 11-20 (2024)
Herpetozoa 37: 11-20

Schlagwörter: 16S, China, Synonym (taxonomy), Gene, COI, taxonomy, Biochemistry, Genetics and Molecular Biology, Type locality, Genetics, 14. Life underwater, RNA Sequencing Data Analysis, systematics, Molecular Biology, Biology, DNA Barcoding for Lepidoptera Taxonomy and Evolution, Global and Planetary Change, Geography, Ecology, Genus, Life Sciences, Hylarana milleti, synonym, Phylogenetic Analysis, 15. Life on land, resurrection, Global Amphibian Declines and Extinctions, Taxonomy (biology), cytb, QL1-991, Rana, Archaeology, FOS: Biological sciences, Environmental Science, Physical Sciences, Anatomy, Zoology, Type (biology), Phylogenetic tree

Dateibeschreibung: text/html

Zugangs-URL: https://doaj.org/article/c9df44bf72f54697ad9c3b4d58eadb8b
https://herpetozoa.pensoft.net/article/114263/
https://herpetozoa.pensoft.net/article/114263/download/pdf/
https://doi.org/10.3897/herpetozoa.37.e114263

Optimized RNA structure alignment algorithm based on longest arc-preserving common subsequence

Autoren: Hazem M. Bahig Mohamed A. G. Hazber Tarek G. Kenawy

Quelle: AIMS Mathematics, Vol 9, Iss 5, Pp 11212-11227 (2024)

Schlagwörter: 0301 basic medicine, multicore system, Geometry, 02 engineering and technology, Mathematical analysis, Bounded function, 03 medical and health sciences, parallel algorithm, Biochemistry, Genetics and Molecular Biology, Secondary Structure Prediction, QA1-939, 0202 electrical engineering, electronic engineering, information engineering, FOS: Mathematics, Longest common subsequence problem, RNA Sequencing Data Analysis, Ribosome Structure and Translation Mechanisms, Molecular Biology, rna alignment, Life Sciences, RNA Structure, Computer science, Algorithm, Arc (geometry), RNA Methylation and Modification in Gene Expression, Combinatorics, sequence alignment, Subsequence, longest common subsequence, optimization, Mathematics

Zugangs-URL: https://doaj.org/article/8773a43fd447425f9ef647c825226b26

Diversity and antimicrobial activity of the tropical ant-derived actinomycetes isolated from Thailand

Autoren: Tuangrat Tunvongvinis Weeyawat Jaitrong Yudthana Samung et al.

Quelle: AIMS Microbiol
AIMS Microbiology, Vol 10, Iss 1, Pp 68-82 (2024)

Schlagwörter: 0301 basic medicine, social insect, ants, Genomic Insights into Social Insects and Symbiosis, Microbiology, 03 medical and health sciences, Biochemistry, Genetics and Molecular Biology, actinomycetes, Health Sciences, Genetics, RNA Sequencing Data Analysis, Molecular Biology, Biology, Pharmacology, 2. Zero hunger, 0303 health sciences, antimicrobial activity, Bacteria, Ants, Life Sciences, Natural Products as Sources of New Drugs, QR1-502, Streptomyces, 6. Clean water, 3. Good health, Actinobacteria, 13. Climate action, FOS: Biological sciences, Medicine, Antimicrobial, Research Article, 16S ribosomal RNA

Zugangs-URL: https://pubmed.ncbi.nlm.nih.gov/38525037
https://doaj.org/article/bf18641e4fe843b9bc7d61a87acc4c62

Isolation of bacteriophages specific to bovine mastitis-causing bacteria and characterization of their lytic activity in pasteurized milk

Autoren: Napakhwan Imklin Patinya Patikae Peekarn Poomirut et al.

Quelle: Vet World
Veterinary World, Vol 17, Iss 1, Pp 207-215 (2024)

Schlagwörter: 0301 basic medicine, Staphylococcus aureus, Phage therapy, Veterinary medicine, Mastitis, mastitis, SF1-1100, Microbiology, Biochemistry, Gene, Food science, 03 medical and health sciences, Isolation (microbiology), Biochemistry, Genetics and Molecular Biology, Virology, SF600-1100, phage, Escherichia coli, Genetics, Bacterial Pathogenesis in Animal and Human Health, RNA Sequencing Data Analysis, Bacteriophage, Molecular Biology, Biology, Immunology and Microbiology, 2. Zero hunger, 0303 health sciences, Lytic cycle, Ecology, Bacteria, bovine, Life Sciences, Ecology and Evolution of Viruses in Ecosystems, 6. Clean water, Animal culture, Virus, 3. Good health, klebsiella pneumoniae, FOS: Biological sciences, Environmental Science, Physical Sciences, Pasteurization, escherichia coli, staphylococcus, Research Article

Zugangs-URL: https://pubmed.ncbi.nlm.nih.gov/38406365
https://doaj.org/article/6545e267fcf641b8946f2f3f6981b47a

Phenotypic Resistance of (MRSA) Clinical Isolates to Some Macrolide Antibiotic Groups

Autoren: A.N. Yaseen Jaleel Samanje Qahtan Adnan Rasheed et al.

Quelle: Journal of Techniques, Vol 5, Iss 4 (2023)

Schlagwörter: Technology, Staphylococcus aureus, Antibiotic resistance, Science, Burn Samples, FOS: Basic medicine, MRSA, Azithromycin, Microbiology, D-Phenotype, Global Challenge of Antibiotic Resistance in Bacteria, 12. Responsible consumption, Cefoxitin, Antibiotics, Vancomycin, Biochemistry, Genetics and Molecular Biology, 11. Sustainability, Genetics, RNA Sequencing Data Analysis, Molecular Biology, Biology, 2. Zero hunger, Ecology, Bacteria, Multidrug-Resistant Bacteria, Clindamycin, Life Sciences, Ecology and Evolution of Viruses in Ecosystems, Penicillin, 6. Clean water, Erythromycin, 3. Good health, FOS: Biological sciences, Antibiotic Resistance, Environmental Science, Physical Sciences, Molecular Medicine, Medicine, Methicillin-resistant Staphylococcus aureus, Teicoplanin

Zugangs-URL: https://doaj.org/article/9cbe06d6d807424dab6ccdc74b88e1de

Verification of Maman (Cleome gynandra (L.) Briq.) from Riau Based on matK and trnL-trnL-trnF Intergenic Spacer

Autoren: Dewi Indriyani Roslim Herman Herman Shalsadila Rahmadani Putri et al.

Quelle: Biosaintifika: Journal of Biology & Biology Education. 15:296-305

Schlagwörter: Single-nucleotide polymorphism, 2. Zero hunger, Genome, Genotype, Botany, Life Sciences, Phylogenetic Analysis, 15. Life on land, Gene, Biochemistry, Genetics and Molecular Biology, FOS: Biological sciences, Intergenic region, Genetics, RNA Sequencing Data Analysis, Indel, Molecular Biology, Biology

Prevalence of carbapenemases among Gram-negative bacteria in Tunisia: first report of KPC-2 producing Acinetobacter baumannii

Autoren: Dhouha Miniaoui Olfa Dziri Y. Ben Lamine et al.

Weitere Verfasser: Dhouha Miniaoui Olfa Dziri Y. Ben Lamine et al.

Quelle: Journal of Infection in Developing Countries, Vol 17, Iss 11 (2023)

Schlagwörter: Acinetobacter baumannii, FOS: Basic medicine, Gene, Endocrinology, Antibiotics, Prevalence, Internal medicine, [SDV.MHEP.ME] Life Sciences [q-bio]/Human health and pathology/Emerging diseases, [SDV.MP.VIR] Life Sciences [q-bio]/Microbiology and Parasitology/Virology, 2. Zero hunger, Dynamics and Pathogenesis of Cholera Bacteria, Acinetobacter, Life Sciences, Carbapenemases, QR1-502, [SDV.MHEP.CSC] Life Sciences [q-bio]/Human health and pathology/Cardiology and cardiovascular system, Anti-Bacterial Agents, 3. Good health, Gram-negative bacteria, Pseudomonas aeruginosa, [SDV.MHEP.MI] Life Sciences [q-bio]/Human health and pathology/Infectious diseases, Molecular Medicine, Medicine, [SDV.MP.PAR] Life Sciences [q-bio]/Microbiology and Parasitology/Parasitology, Tunisia, Microbial Sensitivity Tests, NDM-1, Microbiology, KPC-2, beta-Lactamases, Global Challenge of Antibiotic Resistance in Bacteria, Bacterial Proteins, Biochemistry, Genetics and Molecular Biology, Gram-Negative Bacteria, Escherichia coli, Genetics, RNA Sequencing Data Analysis, Molecular Biology, Biology, OXA-23, Bacteria, RC31-1245, Imipenem, Carbapenems, Antimicrobial Resistance Genes, Gram, Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization, FOS: Biological sciences, VIM-2, [SDV.MP.BAC] Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology

Zugangs-URL: https://pubmed.ncbi.nlm.nih.gov/38064401
https://doaj.org/article/0388fbfc4238422198e8df688977cb1e

An Improved Hashing Approach for Biological Sequence to Solve Exact Pattern Matching Problems

Autoren: Prince Mahmud A. Rahman Kamrul Hasan Talukder

Quelle: Applied Computational Intelligence and Soft Computing, Vol 2023 (2023)

Schlagwörter: Artificial intelligence, Approximate Matching, 0102 computer and information sciences, 02 engineering and technology, 01 natural sciences, Hash table, Pattern Matching, Theoretical computer science, Double hashing, Artificial Intelligence, Computer security, Biochemistry, Genetics and Molecular Biology, Hashing, FOS: Mathematics, 0202 electrical engineering, electronic engineering, information engineering, RNA Sequencing Data Analysis, Pattern matching, Molecular Biology, Data mining, Preprocessor, Algorithms and Architectures for Packet Classification, Text Compression and Indexing Algorithms, Statistics, Life Sciences, QA75.5-76.95, Computer science, Algorithm, Hardware and Architecture, Electronic computers. Computer science, Computer Science, Physical Sciences, sequence alignment, Hash function, Matching (statistics), String Matching, Mathematics

Dateibeschreibung: text/xhtml

Zugangs-URL: https://doaj.org/article/40293fed408148a2a4ab23c4cb25422d

A meta-analysis of rice phosphoproteomics data to understand variation in cell signalling across the rice pan-genome

Autoren: Kerry A Ramsbottom Ananth Prakash Yasset Pérez‐Riverol et al.

Quelle: bioRxiv
J Proteome Res

Schlagwörter: Phosphopeptides, Proteomics, FOS: Computer and information sciences, Phosphoproteomics, genome annotation, Proteome, Bioinformatics, Amino Acid Motifs, Real-Time Polymerase Chain Reaction, Gene, Article, Mass Spectrometry, Computational biology, Protein kinase A, Protein phosphorylation, Biochemistry, Genetics and Molecular Biology, Genetics, RNA Sequencing Data Analysis, Phosphorylation, Databases, Protein, Molecular Biology, Biology, Spectroscopy, Plant Proteins, 2. Zero hunger, Genome, Life Sciences, Oryza, Phosphoproteins, Mass Spectrometry Techniques with Proteins, Chemistry, FOS: Biological sciences, Physical Sciences, Protein Processing, Post-Translational, Genome, Plant, Signal Transduction, Biotechnology

Zugangs-URL: https://pubmed.ncbi.nlm.nih.gov/38810119
https://pubmed.ncbi.nlm.nih.gov/38014076

DNA Barcoding Based Identification of Rosa x Damascene and Prunus dulcis Herbs Using ITS2 Barcoding Gene Amplification

Autoren: Syed Tariq Rizwan Hamza Bari Arshad Saleem et al.

Quelle: Journal of Applied Research in Plant Sciences. 5:58-62

Schlagwörter: 0301 basic medicine, Evolutionary biology, Gene, Computational biology, 03 medical and health sciences, Identification (biology), Biochemistry, Genetics and Molecular Biology, Genetics, DNA barcoding, RNA Sequencing Data Analysis, Molecular Biology, Biology, Barcode, 0303 health sciences, Ribosomal DNA, Biosynthesis and Engineering of Terpenoids, Food Authentication, Botany, Life Sciences, 15. Life on land, Prunus dulcis, Computer science, DNA Barcoding for Food Authentication and Fraud Detection, DNA Barcoding, Polymerase chain reaction, 3. Good health, Phylogenetics, Operating system, Internal transcribed spacer, Ribosomal RNA, FOS: Biological sciences, Cultivar, Prunus

MMPatho: Leveraging Multilevel Consensus and Evolutionary Information for Enhanced Missense Mutation Pathogenic Prediction

Autoren: Fang Ge Muhammad Arif Zihao Yan et al.

Quelle: J Chem Inf Model

Schlagwörter: Consensus, Pathogenicity Prediction, Mutation, Missense, Computational Biology, Reproducibility of Results, Proteins, Life Sciences, Standards and Guidelines for Genetic Variant Interpretation, Computer science, Gene, Computational biology, Variant Databases, FOS: Biological sciences, Biochemistry, Genetics and Molecular Biology, Phenotype Analysis, Exome Sequencing, Mutation, Genetics, Humans, Missense mutation, RNA Sequencing Data Analysis, Ribosome Structure and Translation Mechanisms, Molecular Biology, Biology, metagenomics assembly

Zugangs-URL: https://pubmed.ncbi.nlm.nih.gov/37947586

The untapped potential of actinobacterial lanthipeptides as therapeutic agents

Autoren: Dulce Ramírez-Rendón Fernando Guzmán‐Chávez Carlos García-Ausencio et al.

Quelle: Mol Biol Rep

Schlagwörter: Antibiotic resistance, Bacterial Adhesin, Review, Microbiology, Biochemistry, Natural product, Computational biology, Antibiotics, Biochemistry, Genetics and Molecular Biology, Health Sciences, Humans, RNA Sequencing Data Analysis, Cyclotide Bioengineering and Protein Anchoring Mechanisms, Molecular Biology, Biology, Pharmacology, Biological Products, Life Sciences, Natural Products as Sources of New Drugs, Bacterial Infections, 3. Good health, Anti-Bacterial Agents, Multigene Family, FOS: Biological sciences, Medicine, Antimicrobial, Peptides, Biotechnology

Zugangs-URL: https://pubmed.ncbi.nlm.nih.gov/37934370

Median-Joining Networks and Bayesian Phylogenies Often Do Not Tell the Same Story

Autoren: Sungsik Kong Santiago J. Sánchez‐Pacheco Robert W. Murphy

Quelle: Bulletin of the Society of Systematic Biologists. 2:1-13

Schlagwörter: Composite material, Artificial intelligence, Character (mathematics), Geometry, Evolutionary biology, Bayesian probability, Biochemistry, Gene, Agricultural and Biological Sciences, Statistical hypothesis testing, Inference, Biochemistry, Genetics and Molecular Biology, Branching (polymer chemistry), Genetics, FOS: Mathematics, phylogenetic tree, RNA Sequencing Data Analysis, Molecular Biology, Biology, Ecology, Evolution, Behavior and Systematics, Statistics, Life Sciences, Phylogenetic Analysis, 15. Life on land, Mutualistic Networks, Computer science, Materials science, Phylogenetics, FOS: Biological sciences, Impact of Pollinator Decline on Ecosystems and Agriculture, Population Genetic Structure and Dynamics, Mathematics, Phylogenetic tree

A comparative cytogenetic study of Hypsibarbus malcolmi and H. wetmorei (Cyprinidae, Poropuntiini)

Autoren: Sudarat Khensuwan Weerayuth Supiwong Chatmongkon Suwannapoom et al.

Quelle: Comp Cytogenet
Comparative Cytogenetics, Vol 17, Iss, Pp 181-194 (2023)
Comparative Cytogenetics 17: 181-194

Schlagwörter: 0106 biological sciences, 0301 basic medicine, Clade, chromosomes, Fish cytogenetics, Genome Evolution and Polyploidy in Plants, Karyotype, Cyprinidae, Evolutionary biology, Plant Science, QH426-470, Chromosome, 01 natural sciences, Gene, microsatellites, Agricultural and Biological Sciences, 03 medical and health sciences, Ploidy, Biochemistry, Genetics and Molecular Biology, Genetics, RNA Sequencing Data Analysis, Monophyly, Molecular Biology, Biology, Lineage (genetic), Fluorescence in situ hybridization, Life Sciences, Phylogenetic Analysis, Fish, Fishery, FOS: Biological sciences, Population Genetic Structure and Dynamics, Research Article, Phylogenetic tree

Dateibeschreibung: text/html

Zugangs-URL: https://pubmed.ncbi.nlm.nih.gov/37794860
https://doaj.org/article/477c79685176452693bc11e9c9c6cc64
https://compcytogen.pensoft.net/article/107703/download/pdf/
https://doi.org/10.3897/compcytogen.17.107703
https://compcytogen.pensoft.net/article/107703/