Suchergebnisse - "Oliveira, M. Margarida"

Whole-genome polymorphisms of rice varietes circulating in the European Market

Autoren: Barros, Pedro Miguel Rodrigues Oliveira, M. Margarida Vieira, Maria Beatriz et al.

Individual leaf microbiota tunes a genetic regulatory network to promote leaf growth

Autoren: Custódio, Valeria Salas-González, Isai Gopaulchan, David et al.

Weitere Verfasser: Custódio, Valeria Salas-González, Isai Gopaulchan, David et al.

Schlagwörter: Natural ecosystems, Microbes, Colonize, Phyllosphere, Microbiota, Leaf growth

Dateibeschreibung: application/pdf

Relation: Cell Host & Microbe; info:eu-repo/grantAgreement/FCT/6817 - DCRRNI ID/UID%2FMulti%2F04551%2F2013/PT/Bioresources 4 Sustainability/; info:eu-repo/grantAgreement/FCT/6817 - DCRRNI ID/UIDB%2F04551%2F2020/PT/GREEN-IT "Bioresources for Sustainability"/; info:eu-repo/grantAgreement/FCT/OE/SFRH%2FBD%2F128384%2F2017/PT/soil and water impact on productivity and quality/; info:eu-repo/grantAgreement/BBSRC//BB%2FV011294%2F1/; info:eu-repo/grantAgreement/BBSRC//BB%2FX017745%2F1/; https://doi.org/10.1016/j.chom.2025.02.002; https://riunet.upv.es/handle/10251/221181

Verfügbarkeit: https://riunet.upv.es/handle/10251/221181
https://doi.org/10.1016/j.chom.2025.02.002

First report of Biscogniauxia mediterranea causing cankers on almond trees (Prunus dulcis)

Autoren: FAUSTINO, Ana MARINHO, Cláudia OLIVEIRA, M. Margarida et al.

Quelle: Phytopathologia Mediterranea ; volume 64, issue 2, page 191-197 ; ISSN 1593-2095 0031-9465

Verfügbarkeit: https://doi.org/10.36253/phyto-16049
https://oajournals.fupress.net/index.php/pm/article/download/16049/15168

In silico, in vitro, and in vivo characterization of thiamin-binding proteins from plant seeds

Autoren: Vicente Faustino, Maria Strobbe, Simon Sanchez Muñoz, Raul et al.

Quelle: BIOCHEMICAL JOURNAL ; ISSN: 0264-6021 ; ISSN: 1470-8728

Schlagwörter: Biology and Life Sciences, YEAST SACCHAROMYCES-CEREVISIAE, MULTIPLE SEQUENCE ALIGNMENT, GENE-EXPRESSION, RICE, BIOSYNTHESIS, METABOLISM, RIBOSWITCH, TRANSFORMATION, ACCUMULATION, FUSION

Dateibeschreibung: application/pdf

Relation: https://biblio.ugent.be/publication/01JN3BVEAX3TR2KK1A5AM2QQ20; https://doi.org/10.1042/bcj20240429; https://biblio.ugent.be/publication/01JN3BVEAX3TR2KK1A5AM2QQ20/file/01JPSGG5PWA99KSFJ6DW3NXFV5

Verfügbarkeit: https://biblio.ugent.be/publication/01JN3BVEAX3TR2KK1A5AM2QQ20
https://hdl.handle.net/1854/LU-01JN3BVEAX3TR2KK1A5AM2QQ20
https://doi.org/10.1042/bcj20240429
https://biblio.ugent.be/publication/01JN3BVEAX3TR2KK1A5AM2QQ20/file/01JPSGG5PWA99KSFJ6DW3NXFV5

Tackling Rice Fraudulent Variety Claims: Identification of Molecular Markers with Discriminating Potential

Autoren: Vieira, Maria Beatriz Barros, Pedro M. Oliveira, M. Margarida et al.

Genomic history and ecology of the geographic spread of rice

Autoren: Gutaker, Rafal M Groen, Simon C Bellis, Emily S et al.

Quelle: Nature Plants. 6(5)

Schlagwörter: Human Genome, Genetics, Prevention, Biotechnology, Asia, Biological Evolution, Climate, Domestication, Ecology, Genetic Variation, Oryza, Whole Genome Sequencing, Plant Biology, Crop and Pasture Production

Dateibeschreibung: application/pdf

Zugangs-URL: https://escholarship.org/uc/item/17w9r056
https://escholarship.org/content/qt17w9r056/qt17w9r056.pdf

Mathematical kinetic modelling followed by in vitro and in vivo assays reveal the bifunctional rice GTPCHII/DHBPS enzymes and demonstrate the key roles of OsRibA proteins in the vitamin B2 pathway

Autoren: Vicente Faustino, Maria Lourenço, Tiago Strobbe, Simon et al.

Quelle: BMC Plant Biol
BMC Plant Biology, Vol 24, Iss 1, Pp 1-16 (2024)
BMC PLANT BIOLOGY

Schlagwörter: EXPRESSION, 0301 basic medicine, FMN HYDROLASE, Riboflavin, RibA, Arabidopsis, Oryza sativa, GTP CYCLOHYDROLASE II, RIBOFLAVIN BIOSYNTHESIS, BACILLUS-SUBTILIS, MULTIPLE SEQUENCE ALIGNMENT, 03 medical and health sciences, Humans, Protein Isoforms, 2,5-diamin-6-ribosylamino-4(3H)-pyrimidinone-5-phosphate, Amino Acid Sequence, 3,4-dihydroxy-2-butanone-4-phosphate, GTP Cyclohydrolase, AGROBACTERIUM-MEDIATED TRANSFORMATION, Phylogeny, 2. Zero hunger, 0303 health sciences, 3,4-DIHYDROXY-2-BUTANONE-4-PHOSPHATE SYNTHASE, IDENTIFICATION, Research, Botany, Biology and Life Sciences, Oryza, GENE, Limiting step, QK1-989, Biofortification

Dateibeschreibung: application/pdf

Zugangs-URL: https://pubmed.ncbi.nlm.nih.gov/38532321
https://doaj.org/article/2657270cd5914285b431cc111e2d3f63
http://doi.org/10.1186/s12870-024-04878-z
http://hdl.handle.net/1854/LU-01HYJGPH9MW056NMPTADFP5BR3
https://biblio.ugent.be/publication/01HYJGPH9MW056NMPTADFP5BR3/file/01HYJGQGEQ4VC0BZSZDSE9154E
https://biblio.ugent.be/publication/01HYJGPH9MW056NMPTADFP5BR3

A novel panel of yeast assays for the assessment of thiamin and its biosynthetic intermediates in plant tissues

Autoren: Strobbe, Simon Verstraete, Jana Fitzpatrick, Thérésa Bridget et al.

Quelle: New Phytol
NEW PHYTOLOGIST

Schlagwörter: Nutritional improvement, 0301 basic medicine, Thiamine / metabolism, Thiamine / chemistry, Arabidopsis, PYROPHOSPHOKINASE, turbidimetry, GENE FAMILY, REDUNDANCY, Saccharomyces cerevisiae, METABOLISM, Vitamin quantification, biofortification, SACCHAROMYCES-CEREVISIAE, 03 medical and health sciences, microbiological assays, Tandem Mass Spectrometry, Saccharomyces cerevisiae / metabolism, STRESS TOLERANCE, Thiamine, Arabidopsis / metabolism, 2. Zero hunger, 0303 health sciences, vitamin quantification, Research, Biology and Life Sciences, RIBOSWITCH, Microbiological assays, Tandem Mass Spectrometry / methods, nutritional improvement, BIOFORTIFICATION, ARABIDOPSIS-THALIANA, VITAMIN-B6 BIOSYNTHESIS, metabolic engineering, Biofortification, Metabolic engineering, Turbidimetry, Chromatography, Liquid

Dateibeschreibung: application/pdf

Zugangs-URL: https://onlinelibrary.wiley.com/doi/pdfdirect/10.1111/nph.17974
https://pubmed.ncbi.nlm.nih.gov/35037254
https://archive-ouverte.unige.ch/unige:168730
https://doi.org/10.1111/nph.17974
https://biblio.ugent.be/publication/8735809
https://biblio.ugent.be/publication/8735809/file/8743091
http://doi.org/10.1111/nph.17974
http://hdl.handle.net/1854/LU-8735809

Whole-genome polymorphisms and relatedness of rice varieties circulating in the Mediterranean market.

Autoren: Rodrigues, Hugo M. Vieira, M. Beatriz Barros, Pedro M. et al.

Quelle: Scientific Reports; 11/17/2025, Vol. 15 Issue 1, p1-12, 12p

Schlagwörter: RICE, GENETIC polymorphisms, CULTIVARS, HISTORY of the Mediterranean Region, GENOMES, FRAUD, DROUGHT tolerance, LOCUS (Genetics)

Geografische Kategorien: MEDITERRANEAN Sea, EUROPE

Haplotype diversity patterns in Quercus suber (Fagaceae) inferred from cpDNA sequence data

Autoren: Sousa, Filipe Viegas, Mariana Bray Costa, Joana et al.

Schlagwörter: Glacial refugia, Introgression, Lineage sorting, Mediterranean, Oak forests, Phylogeography

Relation: Keep Pace: Selection of trees keeping pace with fast environmental changes, a science-based approach for sustainable XXI century Oak forests’, co-funded by the EU ERDF funds, within the Portugal 2020 Partnership Agreement and Programa Operacional Regional Algarve; FCT ALG-01-0145-FEDER-029263 / PTDC/ASP/ SIL/29263/2017; FCT PTDC/AGR-GPL/104966/2008; FCT SOBREIRO/0036/2009; FCT GREEN-IT; FCT UIDB/04551/2020; FCT UIDB/00329/2020; Open access funding provided by FCT%7CFCCN (b-on); http://hdl.handle.net/10451/61722

Verfügbarkeit: http://hdl.handle.net/10451/61722
https://doi.org/10.1007/s00606-023-01879-7

An improved reference genome and first organelle genomes of Quercus suber

Autoren: Usié, Ana Serra, Octávio Barros, Pedro M. et al.

Relation: InAlentejo under the scope of “GenoSuber–Cork oak genome sequencing” (ALENT-07-0224-FEDER-001754), and by Alentejo2020, through FEDER under the scope “Lentidev-A genomic approach to cork quality” (ALT20-03-0145-FEDER-000020) and by Program PORTUGAL 2020 Partnership Agreement, under the scope of Biodata.pt–Infraestrutura Portuguesa de Dados Biológicos (22231/01/SAICT/2016), through the European Regional Development Fund (ERDF); (FCT), I.P., is acknowledged for funding researchers: Contrato–Programa to L. Marum (CEECINST/00131/2018), Contrato–Programa to A. Usié (CEECINST/00100/2021/CP2774/CT0001), and Research Contract to P. M. Barros (DL57/2016/CP1369/CT0029); “FASTBREED: implementation of a breeding program on wheat varieties based on genomic selection” (ALT20-03-0145-FEDER-000018). We also thank FCT for the financial support to Research Units UIDB/05183/2020 (MED-Mediterranean Institute for Agriculture, Environment and Development) and GREEN-IT-Bioresources for Sustainability (UIDB/04551/2020, UIDP/04551/2020) as well as LS4FUTURE (LA/P/0087/2020) Associated Laboratory.; http://hdl.handle.net/10451/63447

Verfügbarkeit: http://hdl.handle.net/10451/63447
https://doi.org/10.1007/s11295-023-01624-8

SUMOylation of rice DELLA SLR1 modulates transcriptional responses and improves yield under salt stress

Autoren: Fernandes, Telma Gonçalves, Nuno M. Matiolli, Cleverson C. et al.

Weitere Verfasser: Fernandes, Telma Gonçalves, Nuno M. Matiolli, Cleverson C. et al.

Quelle: Planta ; volume 260, issue 6 ; ISSN 0032-0935 1432-2048

Verfügbarkeit: https://doi.org/10.1007/s00425-024-04565-1
https://link.springer.com/content/pdf/10.1007/s00425-024-04565-1.pdf
https://link.springer.com/article/10.1007/s00425-024-04565-1/fulltext.html

OsTH1 is a key player in thiamin biosynthesis in rice

Autoren: Faustino, Maria Lourenço, Tiago Strobbe, Simon et al.

Quelle: Scientific Reports ; volume 14, issue 1 ; ISSN 2045-2322

Verfügbarkeit: http://dx.doi.org/10.1038/s41598-024-62326-2
https://www.nature.com/articles/s41598-024-62326-2.pdf
https://www.nature.com/articles/s41598-024-62326-2

The impact of drought on phellem development: Identification of novel gene regulators and evidence of photosynthetic activity in cork oak stems

Autoren: Barros, Pedro M. Sapeta, Helena Lucas, Diogo A. et al.

Weitere Verfasser: Barros, Pedro M. Sapeta, Helena Lucas, Diogo A. et al.

Quelle: Environmental and Experimental Botany ; volume 224, page 105785 ; ISSN 0098-8472

Verfügbarkeit: http://dx.doi.org/10.1016/j.envexpbot.2024.105785
https://api.elsevier.com/content/article/PII:S0098847224001436?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S0098847224001436?httpAccept=text/plain

Workflow for identification of InDel markers for rice (Oryza sativa) varietal discrimination

Autoren: Vieira, Maria Beatriz Barros, Pedro M. Lourenço, Tiago F. et al.

Transcriptomics and physiological analyses reveal co-ordinated alteration of metabolic pathways in Jatropha curcas drought tolerance

Autoren: Sapeta, Helena Lourenço, Tiago Lorenz, Stefan et al.

Quelle: Journal of Experimental Botany, 2016 Jan 01. 67(3), 845-860.

Zugangs-URL: https://www.jstor.org/stable/26390612

Haplotype diversity patterns in Quercus suber (Fagaceae) inferred from cpDNA sequence data

Autoren: Sousa, Filipe Viegas, Mariana Bray Costa, Joana et al.

Schlagwörter: Glacial refugia, Introgression, Lineage sorting, Mediterranean, Oak forests, Phylogeography

Relation: info:eu-repo/grantAgreement/FCT/3599-PPCDT/PTDC%2FAGR-GPL%2F104966%2F2008/PT; info:eu-repo/grantAgreement/FCT/6817 - DCRRNI ID/UIDB%2F04551%2F2020/PT; info:eu-repo/grantAgreement/FCT/6817 - DCRRNI ID/UIDB%2F00329%2F2020/PT; https://www.springer.com/journal/606; Sousa, F., Viegas, M.B., Costa, J. et al. Haplotype diversity patterns in Quercus suber (Fagaceae) inferred from cpDNA sequence data. Plant Syst Evol 309, 42 (2023).; http://hdl.handle.net/10400.5/29820

Verfügbarkeit: http://hdl.handle.net/10400.5/29820

The draft genome sequence of cork oak

Autoren: Ramos, António Marcos Usié, Ana Barbosa, Pedro et al.

Relation: ALENT-07-0224-FEDER-001754; FCT IF/01015/2013/CP1209/CT0001; InAlentejo ALENT-07-0224-FEDER-001754; FCT UID/AGR/00115/2013; FCT UID/Multi/04551/2013; FCT SFRH/BPD/86742/2012; FCT IF/01126/2012; FCT IF/00960/2013; FCT IF/01168/2013; EU project ELIXIR-EXCELERATE (H2020, ID 676559); Ramos, A., Usié, A., Barbosa, P. et al. The draft genome sequence of cork oak. Sci Data 5, 180069 (2018). https://doi.org/10.1038/sdata.2018.69; http://hdl.handle.net/10451/59766

Verfügbarkeit: http://hdl.handle.net/10451/59766
https://doi.org/10.1038/sdata.2018.69

The Rice E3-Ubiquitin Ligase HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENE1 Modulates the Expression of ROOT MEANDER CURLING , a Gene Involved in Root Mechanosensing, through the Interaction with Two ETHYLENE-RESPONSE FACTOR Transcription Factors

Autoren: Lourenço, Tiago F. Serra, Tânia S. Cordeiro, André M. et al.

Quelle: Plant Physiology, 2015 Nov 01. 169(3), 2275-2287.

Zugangs-URL: https://www.jstor.org/stable/24807359

Rice phytochrome-interacting factor protein OsPIF14 represses OsDREB1B gene expression through an extended N-box and interacts preferentially with the active form of phytochrome B

Autoren: Cordeiro, André M Figueiredo, Duarte D Tepperman, James et al.

Quelle: Biochimica et Biophysica Acta. 1859(2)

Schlagwörter: Genetics, 1.1 Normal biological development and functioning, Underpinning research, Amino Acid Sequence, Arabidopsis Proteins, Cold Temperature, DNA-Binding Proteins, Droughts, Gene Expression Regulation, Plant, Oryza, Phytochrome B, Plant Proteins, Plants, Genetically Modified, Promoter Regions, Genetic, Stress, Physiological, Transcription Factors, Rice phytochrome-interacting factor 14, OsDREB1B, Protein-DNA interaction, Alternative splicing, Light regulation, Cold stress, Protein–DNA interaction, Physical Sciences, Biological Sciences

Dateibeschreibung: application/pdf

Zugangs-URL: https://escholarship.org/uc/item/3tx9g5hs
https://escholarship.org/content/qt3tx9g5hs/qt3tx9g5hs.pdf