Search Results - "Molecular Sequence Annotation methods"

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    Authors: Hu, Kang Ning, Peng Xu, Minghua et al.

    Source: Computer Science Faculty Publications

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    Source: Nucleic Acids Res
    Nucleic acids research, Vol. 49, No D1 (2021) pp. D480-D489
    Nucleic acids symposium series, 49(D1):D480-D489
    Nucleic Acids Research

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    Contributors: Ian Dunham Ewan Birney Nicole Soranzo et al.

    Source: Lotchkova, V, Ritchie, G R S, Geihs, M, Morganella, S, Min, J, Walter, K, Timpson, N, Dunham, I, Birney, E, Soranzo, N 2019, 'GARFIELD classifies disease-relevant genomic features through integration of functional annotations with association signals', Nature Genetics, vol. 51, no. 2, pp. 343-353. https://doi.org/10.1038/s41588-018-0322-6

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    Source: Computer Science Faculty Publications

    File Description: application/pdf

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    Source: Genome Biol
    Repisalud
    Instituto de Salud Carlos III (ISCIII)
    Genome Biology, Vol 20, Iss 1, Pp 1-23 (2019)
    Genome biology
    Genome biology, vol. 20, no. 1, pp. 244
    Zhou, N, Jiang, Y, Bergquist, T R, Lee, A J, Kacsoh, B Z, Crocker, A W, Lewis, K A, Georghiou, G, Nguyen, H N, Hamid, M N, Davis, L, Dogan, T, Atalay, V, Rifaioglu, A S, Dalklran, A, Cetin Atalay, R, Zhang, C, Hurto, R L, Freddolino, P L, Zhang, Y, Bhat, P, Supek, F, Fernández, J M, Gemovic, B, Perovic, V R, Davidović, R S, Sumonja, N, Veljkovic, N, Asgari, E, Mofrad, M R K, Profiti, G, Savojardo, C, Martelli, P L, Casadio, R, Boecker, F, Schoof, H, Kahanda, I, Thurlby, N, McHardy, A C, Renaux, A, Saidi, R, Gough, J, Freitas, A A, Antczak, M, Fabris, F, Wass, M N, Hou, J, Cheng, J, Wang, Z, Romero, A E, Paccanaro, A, Yang, H, Goldberg, T, Zhao, C, Holm, L, Törönen, P, Medlar, A J, Zosa, E, Borukhov, I, Novikov, I, Wilkins, A, Lichtarge, O, Chi, P H, Tseng, W C, Linial, M, Rose, P W, Dessimoz, C, Vidulin, V, Dzeroski, S, Sillitoe, I, Das, S, Lees, J G, Jones, D T, Wan, C, Cozzetto, D, Fa, R, Torres, M, Warwick Vesztrocy, A, Rodriguez, J M, Tress, M L, Frasca, M, Notaro, M, Grossi, G, Petrini, A, Re, M, Valentini, G, Mesiti, M, Roche, D B, Reeb, J, Ritchie, D W, Aridhi, S, Alborzi, S Z, Devignes, M D, Koo, D C E, Bonneau, R, Gligorijević, V, Barot, M, Fang, H, Toppo, S, Lavezzo, E, Falda, M, Berselli, M, Tosatto, S C E, Carraro, M, Piovesan, D, Ur Rehman, H, Mao, Q, Zhang, S, Vucetic, S, Black, G S, Jo, D, Suh, E, Dayton, J B, Larsen, D J, Omdahl, A R, McGuffin, L J, Brackenridge, D A, Babbitt, P C, Yunes, J M, Fontana, P, Zhang, F, Zhu, S, You, R, Zhang, Z, Dai, S, Yao, S, Tian, W, Cao, R, Chandler, C, Amezola, M, Johnson, D, Chang, J M, Liao, W H, Liu, Y W, Pascarelli, S, Frank, Y, Hoehndorf, R, Kulmanov, M, Boudellioua, I, Politano, G, Di Carlo, S, Benso, A, Hakala, K, Ginter, F, Mehryary, F, Kaewphan, S, Björne, J, Moen, H, Tolvanen, M E E, Salakoski, T, Kihara, D, Jain, A, Šmuc, T, Altenhoff, A, Ben-Hur, A, Rost, B, Brenner, S E, Orengo, C A, Jeffery, C J, Bosco, G, Hogan, D A, Martin, M J, O'Donovan, C, Mooney, S D, Greene, C S, Radivojac, P & Friedberg, I 2019, 'The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens', Genome Biology, vol. 20, no. 1, 244 (2019). https://doi.org/10.1186/s13059-019-1835-8
    Genome Biology
    Genome Biology, vol 20, iss 1

    Subject Terms: Male, 02 engineering and technology, Protein function prediction, Long-term memory, Biofilm, Critical assessment, Community challenge, Procedures, Gene, biofilm, Candida albicans, [INFO.INFO-DB] Computer Science [cs]/Databases [cs.DB], Biology (General), Biological ontology, Settore BIO/11 - BIOLOGIA MOLECOLARE, 0303 health sciences, Bacterial, Plant leaf, Life Sciences, Genomics, 16. Peace & justice, ddc, Analysis of Gene Interaction Networks, Functional Genomics, 3. Good health, Fungal, Drosophila melanogaster, Fungal genome, LIBRARY, Medicine, Genome, Fungal, protein function prediction, Locomotion, Human, Memory, Long-Term, QH301-705.5, Bioinformatics, Annotation, Generation, Medical biotechnology, Long-Term, Article, Big data, 03 medical and health sciences, Memory, Pseudomonas, Health Sciences, Genetics, Humans, Molecular Biology, Biology, Pharmacology, IDENTIFICATION, Animal, 9. Industry and infrastructure, Animals, Biofilms, Candida albicans/genetics, Drosophila melanogaster/genetics, Genome, Bacterial, Molecular Sequence Annotation/methods, Molecular Sequence Annotation/trends, Pseudomonas aeruginosa/genetics, Quality Assessment, Molecular Sequence Annotation, [INFO.INFO-LG] Computer Science [cs]/Machine Learning [cs.LG], Computer science, Long-Term memory, FOS: Biological sciences, Generic health relevance, GENERATION, Library, FOS: Computer and information sciences, 0301 basic medicine, Identification, genome annotation, Candida-albicans, QH426-470, Computational biology, [INFO.INFO-DC] Computer Science [cs]/Distributed, Parallel, and Cluster Computing [cs.DC], Molecular genetics, [INFO.INFO-BI] Computer Science [cs]/Bioinformatics [q-bio.QM], Genome, Biotechnology & applied microbiology, Ontology, Expectation, 4. Education, Genetics & heredity, Functional genomics, Biological Sciences, Networking and Information Technology R&D (NITRD), Human experiment, Function (biology), Pseudomonas aeruginosa, Functional Annotations, Female, BIOINFORMATICS, Adult, [INFO.INFO-AI] Computer Science [cs]/Artificial Intelligence [cs.AI], Long term memory, 0206 medical engineering, Bacterial genome, Information and Computing Sciences, Biochemistry, Genetics and Molecular Biology, RNA Sequencing Data Analysis, CANDIDA-ALBICANS, Research, Human Genome, Natural Products as Sources of New Drugs, Nonhuman, ONTOLOGY, Proteins | Genes | Protein functions, Environmental Sciences

    File Description: application/pdf; Elettronico/Electronic

    Access URL: https://genomebiology.biomedcentral.com/track/pdf/10.1186/s13059-019-1835-8
    https://pubmed.ncbi.nlm.nih.gov/31744546
    https://www.bib.irb.hr/1252143
    https://doi.org/10.1186/s13059-019-1835-8
    http://hdl.handle.net/20.500.12105/8932
    http://hdl.handle.net/20.500.12105/9316
    https://kar.kent.ac.uk/79143/1/s13059-019-1835-8.pdf
    https://centaur.reading.ac.uk/86892/1/s13059-019-1835-8.pdf
    https://doaj.org/article/4c2b017b155b41ceab8d6d078186cafa
    https://inria.hal.science/hal-02393202v1
    https://doi.org/10.1186/s13059-019-1835-8
    https://www.biorxiv.org/content/10.1101/653105v1
    https://www.biorxiv.org/content/biorxiv/early/2019/05/29/653105.full.pdf
    https://www.biorxiv.org/content/10.1101/653105v1.full-text
    https://europepmc.org/abstract/PPR/PPR80644
    https://repository.kaust.edu.sa/handle/10754/660434
    https://pubmed.ncbi.nlm.nih.gov/31744546/
    https://repository.kaust.edu.sa/bitstream/10754/660434/1/Articlefile1.pdf
    https://centaur.reading.ac.uk/86892/
    https://escholarship.org/uc/item/0zt8n2q8
    http://hdl.handle.net/10033/622038
    https://hdl.handle.net/2434/699576
    https://doi.org/10.1186/s13059-019-1835-8
    http://hdl.handle.net/10138/309448
    https://serval.unil.ch/notice/serval:BIB_C7AA251F42E4
    https://serval.unil.ch/resource/serval:BIB_C7AA251F42E4.P001/REF.pdf
    http://nbn-resolving.org/urn/resolver.pl?urn=urn:nbn:ch:serval-BIB_C7AA251F42E42
    https://genomebiology.biomedcentral.com/track/pdf/10.1186/s13059-019-1835-8
    https://doi.org/10.1186/s13059-019-1835-8
    https://hdl.handle.net/11583/2776153
    https://research-information.bris.ac.uk/en/publications/f220ba32-b146-43ec-8c61-41826ad527ab
    https://hdl.handle.net/1983/f220ba32-b146-43ec-8c61-41826ad527ab
    https://hdl.handle.net/11577/3315952
    https://doi.org/10.1186/s13059-019-1835-8
    https://hdl.handle.net/10449/58573
    https://doi.org/10.1186/s13059-019-1835-8
    https://biblio.vub.ac.be/vubir/the-cafa-challenge-reports-improved-protein-function-prediction-and-new-functional-annotations-for-hundreds-of-genes-through-experimental-screens(28914363-0034-4941-8225-8506a66ed964).html
    https://vinar.vin.bg.ac.rs/handle/123456789/8655
    http://hdl.handle.net/11655/24591
    https://hdl.handle.net/20.500.12508/1163
    https://discovery-pp.ucl.ac.uk/id/eprint/10086582/
    https://escholarship.org/uc/item/0zt8n2q8
    https://escholarship.org/content/qt0zt8n2q8/qt0zt8n2q8.pdf
    https://mediatum.ub.tum.de/1545248

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    Source: eLife
    eLife, Vol 6 (2017)
    eLife, 6
    elife

    File Description: application/application/pdf; application/pdf

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