Výsledky vyhledávání - "MESH: DNA Transposable Elements"

Dynamics and evolution of transposable elements in mosquito genomes

Autoři: Daron, Josquin Bergman, Alexander Lambrechts, Louis a další

Přispěvatelé: Daron, Josquin Bergman, Alexander Lambrechts, Louis a další

Zdroj: ISSN: 2214-5745 ; Current Opinion in Insect Science ; https://pasteur.hal.science/pasteur-05232570 ; Current Opinion in Insect Science, 2025, 71, pp.101406. ⟨10.1016/j.cois.2025.101406⟩.

Témata: MESH: DNA Transposable Elements, MESH: Animals, MESH: Culicidae, MESH: Genome, Insect, MESH: Evolution, Molecular, [SDV.MP]Life Sciences [q-bio]/Microbiology and Parasitology, [SDV.MP.VIR]Life Sciences [q-bio]/Microbiology and Parasitology/Virology

Relation: info:eu-repo/semantics/altIdentifier/pmid/40588214; PUBMED: 40588214

Dostupnost: https://pasteur.hal.science/pasteur-05232570
https://pasteur.hal.science/pasteur-05232570v1/document
https://pasteur.hal.science/pasteur-05232570v1/file/Dynamic%20and%20evolution%20mosquito%20genomes.pdf
https://doi.org/10.1016/j.cois.2025.101406

The horizontal transfer of Pseudomonas aeruginosa PA14 ICE PAPI-1 is controlled by a transcriptional triad between TprA, NdpA2 and MvaT

Autoři: Dangla Pélissier, Gauthier Roux, Nicolas Schmidt, Victoria a další

Přispěvatelé: Dangla Pélissier, Gauthier Roux, Nicolas Schmidt, Victoria a další

Zdroj: Nucleic Acids Res

Témata: 0301 basic medicine, Gene Transfer, Horizontal, Genomic Islands, Transcription, Genetic, MESH: Trans-Activators, Virulence Factors, MESH: Biofilms, [SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry, Regulon, Horizontal, MESH: Gene Expression Profiling, 03 medical and health sciences, Genetic, Bacterial Proteins, MESH: Genomic Islands, MESH: Gene Transfer, MESH: Bacterial Proteins, MESH: Virulence Factors, MESH: Conjugation, Molecular Biology/Genomics [q-bio.GN], 0303 health sciences, Gene Expression Profiling, MESH: Transcription, Gene regulation, Chromatin and Epigenetics, Bacterial, Gene Expression Regulation, Bacterial, Chromosomes, Bacterial, MESH: Gene Expression Regulation, [SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology, 3. Good health, MESH: DNA Transposable Elements, Biofilms, Conjugation, Genetic, MESH: Pseudomonas aeruginosa, MESH: Regulon, Pseudomonas aeruginosa, DNA Transposable Elements, Trans-Activators, [SDV.BBM.GTP] Life Sciences [q-bio]/Biochemistry, Molecular Biology/Genomics [q-bio.GN], MESH: Chromosomes, [SDV.MP.BAC] Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology

Popis souboru: text/html

Přístupová URL adresa: https://pubmed.ncbi.nlm.nih.gov/34643711
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8565334/
https://academic.oup.com/nar/article/49/19/10956/6395349
https://pubmed.ncbi.nlm.nih.gov/34643711/

Belt and braces: Two escape ways to maintain the cassette reservoir of large chromosomal integrons

Autoři: Richard, Egill Darracq, Baptiste Littner, Eloi a další

Přispěvatelé: Richard, Egill Darracq, Baptiste Littner, Eloi a další

Zdroj: ISSN: 1553-7390.

Témata: sedentary chromosomal integron, mobile elements, homologous recombination, site specific recombination, genome organization, genome plasticity, bacterial evolution, MESH: Bacteria, MESH: DNA Transposable Elements, MESH: Integrases, MESH: Integrons, [SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Molecular biology, [SDV.MP]Life Sciences [q-bio]/Microbiology and Parasitology

Relation: info:eu-repo/semantics/altIdentifier/pmid/38578806; PUBMED: 38578806; PUBMEDCENTRAL: PMC11023631

Dostupnost: https://pasteur.hal.science/pasteur-04305445
https://pasteur.hal.science/pasteur-04305445v1/document
https://pasteur.hal.science/pasteur-04305445v1/file/2023%20BioRxiv_Loot_v2.full.pdf
https://doi.org/10.1371/journal.pgen.1011231

The human embryo selection arena is associated with transposable element activity

Autoři: Osnato, Anna Pasque, Vincent David, Laurent a další

Přispěvatelé: Osnato, Anna Pasque, Vincent David, Laurent a další

Zdroj: ISSN: 1544-9173.

Témata: MESH: Blastocyst, MESH: DNA Transposable Elements/genetics, MESH: Embryo, Mammalian, MESH: Humans, [SDV]Life Sciences [q-bio]

Relation: info:eu-repo/semantics/altIdentifier/pmid/37348048; PUBMED: 37348048; PUBMEDCENTRAL: PMC10281567

Dostupnost: https://inserm.hal.science/inserm-04208770
https://inserm.hal.science/inserm-04208770v1/document
https://inserm.hal.science/inserm-04208770v1/file/journal.pbio.3002153.pdf
https://doi.org/10.1371/journal.pbio.3002153

IS6110 Copy Number in Multi-Host Mycobacterium bovis Strains Circulating in Bovine Tuberculosis Endemic French Regions

Autoři: Ciriac Charles Cyril Conde Franck Biet a další

Přispěvatelé: Ciriac Charles Cyril Conde Franck Biet a další

Zdroj: Front Microbiol
Frontiers in Microbiology, Vol 13 (2022)
Frontiers in microbiology

Témata: MESH: Mycobacterium bovis, 0301 basic medicine, Molecular Biology/Genomics [q-bio.GN], 0303 health sciences, insertion sequence (IS), bovine tuberculosis (bTB), Bovine, [SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry, [SDV.BID]Life Sciences [q-bio]/Biodiversity, [SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology, Mycobacterium bovis, Microbiology, QR1-502, 3. Good health, MESH: France, 03 medical and health sciences, MESH: DNA Transposable Elements, [SDV.BBM.GTP] Life Sciences [q-bio]/Biochemistry, Molecular Biology/Genomics [q-bio.GN], MESH: Tuberculosis, France, [SDV.MP.BAC] Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology, IS6110, [SDV.BID] Life Sciences [q-bio]/Biodiversity

Popis souboru: application/pdf

Přístupová URL adresa: https://pubmed.ncbi.nlm.nih.gov/35814675
https://doaj.org/article/9aa24d97321d42f79e191a1ddedb679e
https://hal.inrae.fr/hal-03738004v1
https://hal.inrae.fr/hal-03738004v1/document
https://doi.org/10.3389/fmicb.2022.891902

All Quiet on the TE Front? The Role of Chromatin in Transposable Element Silencing

Autoři: Di Stefano, Luisa Unité de biologie Moléculaire, Cellulaire et du Développement (MCD) Centre de Biologie Intégrative (CBI) a další

Přispěvatelé: Di Stefano, Luisa Unité de biologie Moléculaire, Cellulaire et du Développement (MCD) Centre de Biologie Intégrative (CBI) a další

Zdroj: ISSN: 2073-4409 ; Cells ; https://cnrs.hal.science/hal-04798198 ; Cells, 2022, 11 (16), pp.2501. ⟨10.3390/cells11162501⟩.

Témata: chromatin, transposable elements, transcriptional regulation, MESH: Animals, MESH: Chromatin, MESH: DNA Transposable Elements, MESH: Drosophila, MESH: Histone Code, MESH: Mammals, [SDV]Life Sciences [q-bio]

Relation: info:eu-repo/semantics/altIdentifier/pmid/36010577; PUBMED: 36010577; PUBMEDCENTRAL: PMC9406493

Dostupnost: https://cnrs.hal.science/hal-04798198
https://cnrs.hal.science/hal-04798198v1/document
https://cnrs.hal.science/hal-04798198v1/file/cells-11-02501-v2%20%281%29.pdf
https://doi.org/10.3390/cells11162501

Comparative analysis of the Mercenaria mercenaria genome provides insights into the diversity of transposable elements and immune molecules in bivalve mollusks

Autoři: Farhat, Sarah Bonnivard, Eric Pales Espinosa, Emmanuelle a další

Přispěvatelé: Farhat, Sarah Bonnivard, Eric Pales Espinosa, Emmanuelle a další

Zdroj: ISSN: 1471-2164 ; BMC Genomics ; https://hal.science/hal-03619539 ; BMC Genomics, 2022, 23 (1), pp.192. ⟨10.1186/s12864-021-08262-1⟩.

Témata: Gene duplication, Genome, Hard clam, Repeats, Steamer elements, MESH: Animals, MESH: Chromosomes, MESH: DNA Transposable Elements, MESH: Mercenaria, MESH: North America, MESH: Retroelements, [SDV]Life Sciences [q-bio]

Relation: info:eu-repo/semantics/altIdentifier/pmid/35260071; PUBMED: 35260071; PUBMEDCENTRAL: PMC8905726

Dostupnost: https://hal.science/hal-03619539
https://hal.science/hal-03619539v1/document
https://hal.science/hal-03619539v1/file/s12864-021-08262-1.pdf
https://doi.org/10.1186/s12864-021-08262-1

The impact of genetic diversity on gene essentiality within the E. coli species

Autoři: Rousset, François Caballero, José, Cabezas Piastra-Facon, Florence a další

Přispěvatelé: Rousset, François Caballero, José, Cabezas Piastra-Facon, Florence a další

Zdroj: ISSN: 2058-5276.

Témata: MESH: DNA Transposable Elements, MESH: Escherichia coli, MESH: Gene Expression, MESH: Genes, Essential, MESH: Genetic Fitness, MESH: Genetic Variation, MESH: Genome, Bacterial, MESH: Phylogeny, MESH: Species Specificity, [SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology, [SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM]

Relation: info:eu-repo/semantics/altIdentifier/pmid/33462433; info:eu-repo/grantAgreement//677823/EU/Study of the interplay between CRISPR interference and DNA repair pathways towards the development of novel CRISPR tools/CRISPAIR; PUBMED: 33462433

Dostupnost: https://pasteur.hal.science/pasteur-03264663
https://pasteur.hal.science/pasteur-03264663v1/document
https://pasteur.hal.science/pasteur-03264663v1/file/Revised_manuscript_for_thesis.pdf
https://doi.org/10.1038/s41564-020-00839-y

Genome-wide identification of novel genes involved in Corynebacteriales cell envelope biogenesis using Corynebacterium glutamicum as a model

Autoři: de Sousa-D’auria, Célia Constantinesco-Becker, Florence Constant, Patricia a další

Přispěvatelé: de Sousa-D’auria, Célia Constantinesco-Becker, Florence Constant, Patricia a další

Zdroj: ISSN: 1932-6203.

Témata: MESH: Bacterial Proteins / classification, MESH: Bacterial Proteins / genetics, MESH: Galactans / metabolism, MESH: Gene Expression, MESH: Gene Ontology, MESH: Genetic Loci, MESH: Genome, Bacterial, MESH: Molecular Sequence Annotation, MESH: Mutagenesis, Insertional, MESH: Mycolic Acids / metabolism, MESH: Peptidoglycan / genetics, MESH: Peptidoglycan / metabolism, MESH: Bacterial Proteins / metabolism, MESH: Plasmids / chemistry, MESH: Plasmids / metabolism, MESH: Cell Wall / genetics, MESH: Cell Wall / metabolism, MESH: Computational Biology / methods, MESH: Corynebacterium glutamicum / genetics, MESH: Corynebacterium glutamicum / metabolism, MESH: DNA Transposable Elements, MESH: Galactans / genetics, [SDV.SP]Life Sciences [q-bio]/Pharmaceutical sciences

Relation: info:eu-repo/semantics/altIdentifier/pmid/33383576; PUBMED: 33383576; PUBMEDCENTRAL: PMC7775120

Dostupnost: https://ut3-toulouseinp.hal.science/hal-04734532
https://ut3-toulouseinp.hal.science/hal-04734532v1/document
https://ut3-toulouseinp.hal.science/hal-04734532v1/file/SOUSA-D%20AURIA-2020.pdf
https://doi.org/10.1371/journal.pone.0240497

Widespread conservation and lineage-specific diversification of genome-wide DNA methylation patterns across arthropods.

Autoři: Lewis, Samuel Ross, Laura Bain, Stevie a další

Přispěvatelé: Lewis, Samuel Ross, Laura Bain, Stevie a další

Zdroj: ISSN: 1553-7390.

Témata: MESH: Animals, MESH: Arthropods, MESH: CpG Islands, MESH: DNA Methylation, MESH: DNA Transposable Elements, MESH: Epigenesis, Genetic, MESH: Evolution, Molecular, MESH: Exons, MESH: Phylogeny, MESH: Promoter Regions, [SDV]Life Sciences [q-bio]

Relation: info:eu-repo/semantics/altIdentifier/pmid/32584820; PUBMED: 32584820; PUBMEDCENTRAL: PMC7343188

Dostupnost: https://hal.science/hal-03021762
https://hal.science/hal-03021762v1/document
https://hal.science/hal-03021762v1/file/91-Lewis_2020_PlosGenet.pdf
https://doi.org/10.1371/journal.pgen.1008864

Illumina TruSeq synthetic long-reads empower de novo assembly and resolve complex, highly-repetitive transposable elements.

Autoři: Mccoy, Rajiv Taylor, Ryan Blauwkamp, Timothy a další

Přispěvatelé: Mccoy, Rajiv Taylor, Ryan Blauwkamp, Timothy a další

Zdroj: ISSN: 1932-6203.

Témata: MESH: Animals, MESH: DNA Transposable Elements, MESH: Drosophila melanogaster, MESH: Genome, MESH: High-Throughput Nucleotide Sequencing, [SDV.GEN.GA]Life Sciences [q-bio]/Genetics/Animal genetics, [SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Genomics [q-bio.GN]

Relation: info:eu-repo/semantics/altIdentifier/pmid/25188499; PUBMED: 25188499; PUBMEDCENTRAL: PMC4154752

Dostupnost: https://hal.umontpellier.fr/hal-03024236
https://hal.umontpellier.fr/hal-03024236v1/document
https://hal.umontpellier.fr/hal-03024236v1/file/pone.0106689.pdf
https://doi.org/10.1371/journal.pone.0106689

A Tale of Genome Compartmentalization: The Evolution of Virulence Clusters in Smut Fungi

Autoři: Dutheil, Julien Mannhaupt, Gertrud Schweizer, Gabriel a další

Přispěvatelé: Dutheil, Julien Mannhaupt, Gertrud Schweizer, Gabriel a další

Zdroj: Genome Biol Evol
Genome biology and evolution
Genome Biol. Evol. 8, 681-704 (2016)
Genome biology and evolution : GBE 8(3), 681-704 (2016). doi:10.1093/gbe/evw026

Témata: 0301 basic medicine, repeat sequences, effector proteins, [SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry, gene cluster, MESH: Saccharum, Evolution, Molecular, Fungal Proteins, 03 medical and health sciences, MESH: Plant Diseases, Gene Duplication, MESH: Evolution, Ustilago, MESH: Genome, MESH: Phylogeny, [SDV.MP.MYC]Life Sciences [q-bio]/Microbiology and Parasitology/Mycology, Effector Proteins, Gene Cluster, Genome Architecture, Repeat Sequences, Selection Interference, selection interference, Phylogeny, Plant Diseases, Molecular Biology/Genomics [q-bio.GN], genome architecture, 0303 health sciences, MESH: Genomics, MESH: Gene Duplication, gene duplication, Molecular, Genomics, [SDV.MP.MYC] Life Sciences [q-bio]/Microbiology and Parasitology/Mycology, Saccharum, Fungal, MESH: DNA Transposable Elements, Multigene Family, DNA Transposable Elements, MESH: Multigene Family, [SDV.BBM.GTP] Life Sciences [q-bio]/Biochemistry, Molecular Biology/Genomics [q-bio.GN], MESH: Fungal Proteins, Genome, Fungal, MESH: Ustilago, Research Article

Popis souboru: application/pdf

Přístupová URL adresa: https://academic.oup.com/gbe/article-pdf/8/3/681/13165173/evw026.pdf
https://pubmed.ncbi.nlm.nih.gov/26872771
https://pure.mpg.de/pubman/faces/ViewItemOverviewPage.jsp?itemId=item_2251232
https://paperity.org/p/75816033/a-tale-of-genome-compartmentalization-the-evolution-of-virulence-clusters-in-smut-fungi
http://gbe.oxfordjournals.org/content/8/3/681.full
https://hal.archives-ouvertes.fr/hal-03040297v1
https://www.cabdirect.org/cabdirect/abstract/20163125135
https://academic.oup.com/gbe/article/8/3/681/2574124
http://hdl.handle.net/21.11116/0000-0005-1AAD-C
http://hdl.handle.net/11858/00-001M-0000-0029-C649-0
https://hal.umontpellier.fr/hal-03040297v1/document
https://doi.org/10.1093/gbe/evw026
https://hal.umontpellier.fr/hal-03040297v1
https://push-zb.helmholtz-muenchen.de/frontdoor.php?source_opus=47934
https://publications.rwth-aachen.de/record/726822

The impact of genetic diversity on gene essentiality within theE. colispecies

Autoři: Eduardo P. C. Rocha François Rousset Erick Denamur a další

Přispěvatelé: Eduardo P. C. Rocha François Rousset Erick Denamur a další

Témata: 0301 basic medicine, 0303 health sciences, MESH: Gene Expression, [SDV.BIBS] Life Sciences [q-bio]/Quantitative Methods [q-bio.QM], MESH: Escherichia coli, Bacterial, [SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology, [SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM], MESH: Genes, 3. Good health, 03 medical and health sciences, Essential, MESH: DNA Transposable Elements, MESH: Genetic Fitness, MESH: Species Specificity, MESH: Genome, MESH: Genetic Variation, [SDV.MP.BAC] Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology, MESH: Phylogeny

Popis souboru: application/pdf

Přístupová URL adresa: https://www.biorxiv.org/content/biorxiv/early/2020/05/25/2020.05.25.114553.full.pdf
https://biorxiv.org/content/10.1101/2020.05.25.114553v1.full.pdf
https://www.biorxiv.org/content/biorxiv/early/2020/05/25/2020.05.25.114553.full.pdf
https://www.biorxiv.org/content/10.1101/2020.05.25.114553v1.article-info
https://www.biorxiv.org/content/10.1101/2020.05.25.114553v1
https://europepmc.org/article/PPR/PPR167198

Phenotypic and molecular characterisations of carbapenem-resistant Acinetobacter baumannii strains isolated in Madagascar

Autoři: Simo Tchuinte, Pierrette Landrie Rabenandrasana, Mamitiana Alain Noah Kowalewicz, Carole a další

Přispěvatelé: Simo Tchuinte, Pierrette Landrie Rabenandrasana, Mamitiana Alain Noah Kowalewicz, Carole a další

Zdroj: ISSN: 2047-2994 ; Antimicrobial Resistance and Infection Control ; https://riip.hal.science/pasteur-03238213 ; Antimicrobial Resistance and Infection Control, 2019, 8 (1), pp.31. ⟨10.1186/s13756-019-0491-9⟩.

Témata: Acinetobacter baumannii, Antimicrobial resistance, Carbapenem-resistance, MESH: Acinetobacter Infections, MESH: Acinetobacter baumannii, MESH: Plasmids, MESH: Virulence Factors, MESH: Anti-Bacterial Agents, MESH: Bacterial Proteins, MESH: Carbapenems, MESH: DNA Transposable Elements, MESH: Drug Resistance, Multiple, Bacterial, MESH: Genomic Islands, MESH: Humans, MESH: Integrons, MESH: Madagascar, MESH: Microbial Sensitivity Tests, MESH: Phenotype, [SDV.MHEP.MI]Life Sciences [q-bio]/Human health and pathology/Infectious diseases, [SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology, [SDV.SPEE]Life Sciences [q-bio]/Santé publique et épidémiologie

Relation: info:eu-repo/semantics/altIdentifier/pmid/30792853; PUBMED: 30792853; PUBMEDCENTRAL: PMC6371490

Dostupnost: https://riip.hal.science/pasteur-03238213
https://riip.hal.science/pasteur-03238213v1/document
https://riip.hal.science/pasteur-03238213v1/file/s13756-019-0491-9.pdf
https://doi.org/10.1186/s13756-019-0491-9

Stress response, behavior, and development are shaped by transposable element-induced mutations in Drosophila.

Autoři: Rech, Gabriel E Bogaerts-Márquez, María Barrón, Maite G a další

Přispěvatelé: Rech, Gabriel E Bogaerts-Márquez, María Barrón, Maite G a další

Zdroj: ISSN: 1553-7390.

Témata: sequence, adaptation, melanogaster, reference panel, positive selection, genetic-variation, genome-wide patterns, evolution, population, insecticide resistance, MESH: Animals, MESH: Behavior, Animal: physiology, MESH: Selection, Genetic: genetics, MESH: Stress, Physiological: genetics, MESH: DNA Transposable Elements: genetics, MESH: Drosophila melanogaster: genetics, MESH: Evolution, Molecular, MESH: Gene Expression Regulation, Developmental: genetics, MESH: Gene Frequency: genetics, MESH: Genome, Insect: genetics, MESH: Mutation: genetics, MESH: Polymorphism, Single Nucleotide: genetics, [SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE]

Relation: info:eu-repo/semantics/altIdentifier/pmid/30753202; info:eu-repo/grantAgreement//647900/EU/New approaches to long-standing questions: adaptation in Drosophila/DROSADAPTATION; PRODINRA: 472919; PUBMED: 30753202; WOS: 000459970100013

Dostupnost: https://hal.science/hal-02306987
https://hal.science/hal-02306987v1/document
https://hal.science/hal-02306987v1/file/2019_Rech_Plos%20Genetics_1.pdf
https://doi.org/10.1371/journal.pgen.1007900

FcpB Is a Surface Filament Protein of the Endoflagellum Required for the Motility of the Spirochete Leptospira

Autoři: Wunder, Elsio, A. Jr Slamti, Leyla Suwondo, David, N a další

Přispěvatelé: Wunder, Elsio, A. Jr Slamti, Leyla Suwondo, David, N a další

Zdroj: ISSN: 2235-2988 ; Frontiers in Cellular and Infection Microbiology ; https://pasteur.hal.science/pasteur-02100036 ; Frontiers in Cellular and Infection Microbiology, 2018, 8, pp.130. ⟨10.3389/fcimb.2018.00130⟩.

Témata: Leptospira, spirochetes, flagella, motility, flagellar system, MESH: Amino Acid Sequence, MESH: Cell Movement, MESH: Sequence Deletion, MESH: Cryoelectron Microscopy, MESH: DNA Transposable Elements, MESH: Flagella, MESH: Flagellin, MESH: Leptospira, MESH: Microscopy, Video, MESH: Phenotype, MESH: Sequence Alignment, [SDV]Life Sciences [q-bio], [SDV.MP]Life Sciences [q-bio]/Microbiology and Parasitology

Relation: info:eu-repo/semantics/altIdentifier/pmid/29868490; PRODINRA: 430556; PUBMED: 29868490; PUBMEDCENTRAL: PMC5953323; WOS: 000431685800001

Dostupnost: https://pasteur.hal.science/pasteur-02100036
https://pasteur.hal.science/pasteur-02100036v1/document
https://pasteur.hal.science/pasteur-02100036v1/file/PMID%2029868490.pdf
https://doi.org/10.3389/fcimb.2018.00130

Whole-genome analyses resolve early branches in the tree of life of modern birds

Autoři: Joel Cracraft Nitish Narula Rute R. da Fonseca a další

Přispěvatelé: Joel Cracraft Nitish Narula Rute R. da Fonseca a další

Zdroj: Sicheritz-Pontén, T, Li, C, Li, B, Munch, K, Schierup, M H, Bertelsen, M F, Fjeldsa, J, Jønsson, K A, Wang, J, Willerslev, E & Petersen, B 2014, ' Whole-genome analyses resolve early branches in the tree of life of modern birds ', Science, vol. 346, no. 6215, pp. 1320-1331 . https://doi.org/10.1126/science.1253451
Science, vol 346, iss 6215
Jarvis, E D, Mirarab, S, Aberer, A J, Li, B, Houde, P, Li, C, Ho, S Y W, Faircloth, B C, Nabholz, B, Howard, J T, Suh, A, Weber, C C, da Fonseca, R R, Li, J, Zhang, F, Li, H, Zhou, L, Narula, N, Liu, L, Ganapathy, G, Boussau, B, Bayzid, M S, Zavidovych, V, Subramanian, S, Gabaldón, T, Capella-Gutiérrez, S, Huerta-Cepas, J, Rekepalli, B, Munch, K, Schierup, M, Lindow, B, Warren, W C, Ray, D, Green, R E, Bruford, M W, Zhan, X, Dixon, A, Li, S, Li, N, Huang, Y, Derryberry, E P, Bertelsen, M F, Sheldon, F H, Brumfield, R T, Mello, C V, Lovell, P V, Wirthlin, M, Schneider, M P C, Prosdocimi, F, Samaniego, J A, Vargas Velazquez, A M, Alfaro-Núñez, A, Campos, P F, Petersen, B, Sicheritz-Ponten, T, Pas, A, Bailey, T, Scofield, P, Bunce, M, Lambert, D M, Zhou, Q, Perelman, P, Driskell, A C, Shapiro, B, Xiong, Z, Zeng, Y, Liu, S, Li, Z, Liu, B, Wu, K, Xiao, J, Yinqi, X, Zheng, Q, Zhang, Y, Yang, H, Wang, J, Smeds, L, Rheindt, F E, Braun, M, Fjeldsa, J, Orlando, L, Barker, F K, Jønsson, K A, Johnson, W, Koepfli, K-P, O'Brien, S, Haussler, D, Ryder, O A, Rahbek, C, Willerslev, E, Graves, G R, Glenn, T C, McCormack, J, Burt, D, Ellegren, H, Alström, P, Edwards, S V, Stamatakis, A, Mindell, D P, Cracraft, J, Braun, E L, Warnow, T, Jun, W, Gilbert, M T P & Zhang, G 2014, 'Whole-genome analyses resolve early branches in the tree of life of modern birds', Science, vol. 346, no. 6215, pp. 1320-31. https://doi.org/10.1126/science.1253451

Témata: ddc:004, 0301 basic medicine, MESH: Introns, MESH: Base Sequence, MESH: INDEL Mutation, MESH: Avian Proteins, INDEL Mutation, Poultry or Avian Science, MESH: Animals, MESH: Phylogeny, Phylogeny, 0303 health sciences, Genome, [SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE], Biodiversity, Biological Evolution, MESH: Genes, Multidisciplinary Sciences, MESH: DNA Transposable Elements, MESH: Birds, Phylogeny and comparative analysis, Science & Technology - Other Topics, Sequence Analysis, General Science & Technology, Genetic Speciation, MESH: Biological Evolution, [SDV.GEN.GA] Life Sciences [q-bio]/Genetics/Animal genetics, Avian Proteins, Birds, MESH: Sequence Analysis, 03 medical and health sciences, Genetics, [SDV.BID.EVO] Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE], Animals, MESH: Genome, MESH: Genetic Speciation, Base Sequence, DATA processing & computer science, Human Genome, Genetics and Genomics, DNA, Sequence Analysis, DNA, 15. Life on land, FoR multidisciplinary, Introns, [SDV.GEN.GA]Life Sciences [q-bio]/Genetics/Animal genetics, Genes, 13. Climate action, DNA Transposable Elements

Popis souboru: application/pdf; restricted

Přístupová URL adresa: https://research-repository.griffith.edu.au/bitstream/10072/67425/1/SankarasubramanianPUB2.pdf
https://pubmed.ncbi.nlm.nih.gov/25504713
https://espace.library.curtin.edu.au/R?func=dbin-jump-full&local_base=gen01-era02&object_id=212869
https://ohsu.pure.elsevier.com/en/publications/whole-genome-analyses-resolve-early-branches-in-the-tree-of-life--2
https://www.sciencemag.org/lookup/doi/10.1126/science.1253451
https://dukespace.lib.duke.edu/dspace/handle/10161/11237
https://dukespace.lib.duke.edu/dspace/bitstream/10161/11237/1/Science-2014-Jarvis-1320-31%20corrected%20Jan%202015.pdf
https://www.science.org/doi/10.1126/science.1253451
https://orbit.dtu.dk/en/publications/e773adee-1eb7-42ef-8754-37fa64c77014
https://hal.umontpellier.fr/hal-03021815v1/document
https://doi.org/10.1126/science.1253451
https://hal.umontpellier.fr/hal-03021815v1
https://escholarship.org/uc/item/5ck3h193
https://pure.au.dk/portal/en/publications/b128c785-ef0f-4c06-b4d7-a179891c0404
https://doi.org/10.1126/science.1253451

Comparative genomic analysis provides insights into the evolution and niche adaptation of marineMagnetospirasp.QH‐2 strain

Autoři: Jiesheng Tian Valérie Barbe Monique Sabaty a další

Přispěvatelé: Jiesheng Tian Valérie Barbe Monique Sabaty a další

Zdroj: Environmental Microbiology. 16:525-544

Témata: DNA, Bacterial, 0301 basic medicine, Genomic Islands, [SDV]Life Sciences [q-bio], MESH: Symporters/genetics, Bacterial/genetics, Adaptation, Biological, MESH: Bacterial Proteins/genetics, MESH: Quinone Reductases/genetics, Bacterial, Synteny, MESH: Biological Evolution, MESH: Magnetospirillum/genetics, 03 medical and health sciences, MESH: Adaptation, Bacterial Proteins, MESH: Magnetospirillum/physiology, MESH: Genomic Islands, MESH: Seawater/microbiology, MESH: Genome, Seawater, 14. Life underwater, Magnetospirillum, Quinone Reductases, MESH: Phylogeny, Ecosystem, Phylogeny, Comparative Genomic Hybridization, Symporters, MESH: DNA, MESH: Synteny, MESH: Magnetosomes/genetics, Biological Evolution, MESH: Ecosystem, 6. Clean water, MESH: Comparative Genomic Hybridization, [SDV] Life Sciences [q-bio], MESH: DNA Transposable Elements, Multigene Family, DNA Transposable Elements, MESH: Multigene Family, Magnetosomes, Genome, Bacterial, Biological/genetics

Přístupová URL adresa: https://pubmed.ncbi.nlm.nih.gov/23841906
http://www.irgrid.ac.cn/handle/1471x/947335
https://hal-cnrs.archives-ouvertes.fr/hal-02463127
https://pubag.nal.usda.gov/catalog/619849
https://europepmc.org/abstract/MED/23841906
https://sfamjournals.onlinelibrary.wiley.com/doi/abs/10.1111/1462-2920.12180
http://onlinelibrary.wiley.com/doi/10.1111/1462-2920.12180/abstract
http://www.documentation.ird.fr/hor/fdi:010061774

The banana (Musa acuminata) genome and the evolution of monocotyledonous plants

Autoři: Gaëtan Droc Adriana Alberti Philippe Francois a další

Přispěvatelé: Gaëtan Droc Adriana Alberti Philippe Francois a další

Zdroj: Nature

Témata: 0301 basic medicine, 580 Plants (Botany), resource, Haploidy, in-situ hybridization, Musa acuminata, F30 - Génétique et amélioration des plantes, MESH: Genotype, sequence count data, 10126 Department of Plant and Microbial Biology, Gene Duplication, dna sequences, [SDV.BV] Life Sciences [q-bio]/Vegetal Biology, évolution, maximum likelihood, MESH: Phylogeny, Knowmad Institut, Conserved Sequence, Phylogeny, Netherlands, 2. Zero hunger, 0303 health sciences, MESH: Conserved Sequence, Genome, Multidisciplinary, musa (bananas), MESH: Gene Duplication, MESH: Haploidy, F70 - Taxonomie végétale et phytogéographie, MESH: Genes, MESH: DNA Transposable Elements, génotype, Genome, Plant, SEQUENCE COUNT DATA, dna-sequences, diversification, triploidy, Genotype, Evolution, Molecular Sequence Data, Poaceae, Genes, Plant, differential expression, Evolution, Molecular, 03 medical and health sciences, genotypes, MESH: Musa, MESH: Evolution, phylogénie, [SDV.BV]Life Sciences [q-bio]/Vegetal Biology, MESH: Genome, gene, 1000 Multidisciplinary, MESH: Molecular Sequence Data, génome, rice, Molecular, Musa, Plant, séquence nucléotidique, IN-SITU HYBRIDIZATION, 15. Life on land, DNA-SEQUENCES, Genes, DNA Transposable Elements, identification, maximum-likelihood, in situ hybridization, genomes

Popis souboru: application/pdf; p. 213-217; metadata

Přístupová URL adresa: https://www.nature.com/articles/nature11241.pdf
https://pubmed.ncbi.nlm.nih.gov/22801500
https://www.ncbi.nlm.nih.gov/pubmed/22801500
https://nature.com/nature/journal/v488/n7410/fig_tab/nature11241_F1.html
https://ui.adsabs.harvard.edu/abs/2012Natur.488..213D/abstract
https://articuloscientificos.files.wordpress.com/2012/07/doc12.pdf
https://nature.com/articles/nature11241
https://EconPapers.repec.org/RePEc:nat:nature:v:488:y:2012:i:7410:d:10.1038_nature11241
https://www.openaccessrepository.it/record/92017
http://hdl.handle.net/11104/0211689
http://agritrop.cirad.fr/565099/1/document_565099.pdf
http://agritrop.cirad.fr/565099/
https://www.zora.uzh.ch/id/eprint/74965/
https://doi.org/10.5167/uzh-74965

Insertion Sequence-Driven Evolution of Escherichia coli in Chemostats

Autoři: Thomas Ferenci Joël Gaffé Ram P. Maharjan a další

Přispěvatelé: Thomas Ferenci Joël Gaffé Ram P. Maharjan a další

Zdroj: Journal of Molecular Evolution. 72:398-412

Témata: 0301 basic medicine, MESH: Mutation, MESH: Gene Rearrangement, Cell Culture Techniques, Evolution, Molecular, 03 medical and health sciences, MESH: Evolution, Escherichia coli, MESH: Genome, MESH: Genetic Variation, MESH: Phylogeny, Phylogeny, Gene Rearrangement, MESH: Cell Culture Techniques, 0303 health sciences, MESH: Escherichia coli, [SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE], Bacterial, Molecular, Genetic Variation, MESH: Genes, 3. Good health, MESH: DNA Transposable Elements, Genes, Bacterial, Mutation, DNA Transposable Elements, Genome, Bacterial

Přístupová URL adresa: https://pubmed.ncbi.nlm.nih.gov/21399911
https://link.springer.com/article/10.1007/s00239-011-9439-2
http://www.ncbi.nlm.nih.gov/pubmed/21399911
http://ui.adsabs.harvard.edu/abs/2011JMolE..72..398G/abstract
https://hal.archives-ouvertes.fr/hal-00800692
https://pubmed.ncbi.nlm.nih.gov/21399911/
https://researchers.mq.edu.au/en/publications/insertion-sequence-driven-evolution-of-iescherichia-colii-in-chem