Search Results - "High-Throughput Sequencing"

Estudi comparatiu de la microbiota oral de l'antiga Tàrraco i la població actual

Authors: González Ruiz, Mercedes

Contributors: University/Department: Universitat de Girona. Departament de Biologia

Thesis Advisors: Garcia-Gil, L. J., Adserias Garriga, Maria José, Gomis, Ramon

Source: TDX (Tesis Doctorals en Xarxa)

Subject Terms: ADN antic, ADN antiguo, Ancient DNA, Microbioma oral, Oral microbiome, Càlcul dental, Cálculo dental, Dental calculus, Seqüenciació d'alt rendiment, Secuenciación de alto rendimiento, High throughput sequencing, Antiga ciutat romana, Antigua ciudad romana, Ancient roman city, Tarragona

File Description: application/pdf

Access URL: http://hdl.handle.net/10803/692987

A genome survey of Tetrix japonica (Insecta, Orthoptera) reveals a comparatively small Tetrigidae genome

Authors: Li, Xuejuan Chen, Yanpu Liu, Yuxin et al.

Contributors: Li, Xuejuan Chen, Yanpu Liu, Yuxin et al.

Source: 1254:191-205

Subject Terms: genome size, high-throughput sequencing, high-throughput sequencing, pygmy grasshopper, repetitive sequence

Access URL: https://www.biodiversitylibrary.org/part/433940

Population dynamics, interactions and evolution of marine microbes using genomic approaches

Authors: Latorre Pérez, Francisco

Contributors: University/Department: Universitat Politècnica de Catalunya. Departament d'Enginyeria Civil i Ambiental

Thesis Advisors: Logares Haurie, Ramiro Ernesto, Jaillon, Olivier, Mösso Aranda, César

Source: TDX (Tesis Doctorals en Xarxa)

Subject Terms: Population dynamics, Evolution, Interactions, Marine microbes, Protists, High-throughput sequencing, Single-cell Genomics, Marine ecology, Metagenomics, Marine environment

File Description: application/pdf

Access URL: http://hdl.handle.net/10803/689381
https://dx.doi.org/10.5821/dissertation-2117-396974

Sources of prey availability data alter interpretation of outputs from prey choice null networks

Authors: Cuff, Jordan P. Tercel, Maximillian P. T. G. Windsor, Fredric M. et al.

Source: Ecological Entomology. 49(3):418-432

Subject Terms: dietary analysis, high-throughput sequencing, metabarcoding, network ecology, null modelling, resource preference

File Description: print

Access URL: https://urn.kb.se/resolve?urn=urn:nbn:se:su:diva-226644
https://doi.org/10.1111/een.13315

DNA metabarcoding reveals distinct trophic niches among sympatric aerial insectivores (Family: Apodidae and Hirundinidae) in central Peninsular Malaysia

Authors: Arazmi, Fatihah Najihah Ismail, Nor Adibah Daud, Ummi Nur Syafiqah et al.

Contributors: Arazmi, Fatihah Najihah Ismail, Nor Adibah Daud, Ummi Nur Syafiqah et al.

Source: 59:207-229

Subject Terms: Aerial insectivores, ANML primer sets, cytochrome c oxidase I (COI), dietary segregation, high throughput sequencing, mosaic landscape

Access URL: https://www.biodiversitylibrary.org/part/433179

Dataset of Grey plover (Pluvialis squatarola) diet composition on the SW Black Sea coast using DNA metabarcoding

Authors: Vassileva, Liliana V. Lozanova, Lyudmila Marinov, Martin et al.

Contributors: Vassileva, Liliana V. Lozanova, Lyudmila Marinov, Martin et al.

Source: 13:1-18

Subject Terms: Black-bellied plover, CO1, coastal food webs, environmental DNA, High Throughput Sequencing (HTS), Illumina MiSeq, Shorebirds, south-western Black Sea

Access URL: https://www.biodiversitylibrary.org/part/431720

Oral microbiome : composition, interactions and shaping factors

Authors: Willis, Jesse

Contributors: University/Department: Universitat Pompeu Fabra. Departament de Ciències Experimentals i de la Salut

Thesis Advisors: Gabaldón Estevan, Juan Antonio

Source: TDX (Tesis Doctorals en Xarxa)

Subject Terms: Oral microbiome, High-throughput sequencing, 165 ribosomal RNA gene, Oral health, Oral mycobiome, Microbioma oral, Secuenciación de alto rendimiento, Gen 165 ARN ribosómico, Salud oral, Micobioma oral

Time: 616.3

File Description: application/pdf

Access URL: http://hdl.handle.net/10803/672950

Nation-wide virome survey of banana plantations and surrounding plants in Malawi

Authors: Masangwa, Johnny Isaac Gregorio Temple, Coline Rollin, Johan et al.

Source: International Advances in Plant Virology 2025 Conference, Murcia, Spain [ES], 8-11 April 2025

Subject Terms: High throughput sequencing, new virus hosts, novel viruses, genomic analyses, Life sciences, Biotechnology, Sciences du vivant, Biotechnologie

File Description: 1

Relation: http://www.aab.org.uk

Access URL: https://orbi.uliege.be/handle/2268/333614

The first complete chloroplast genome sequence of Sterculia foetida Linnaeus (Malvaceae) and a comparative phylogenetic analysis

Authors: Peisi Luo Lijun Huang Zhiluo Zhou et al.

Source: Mitochondrial DNA B Resour
Mitochondrial DNA. Part B. Resources, Vol 10, Iss 8, Pp 731-735 (2025)

Subject Terms: plant systematics, gene annotation, High-throughput sequencing, Genetics, Plastome Report, QH426-470

Access URL: https://doaj.org/article/78852eb9e8244ae99a06a729b1c092e4

Consensus of the Italian Primary Immunodeficiency Network on the use and interpretation of genetic testing for diagnosing inborn errors of immunity

Authors: Giardino, Giuliana Di Matteo, Gigliola Giliani, Silvia et al.

Contributors: Giardino, Giuliana Di Matteo, Gigliola Giliani, Silvia et al.

Source: Journal of Allergy and Clinical Immunology. 155:1149-1160

Subject Terms: next generation sequencing, Sanger sequencing, consensus, genetic tests, high-throughput sequencing, Inborn errors of immunity, next-generation sequencing, whole-exome sequencing, Settore MEDS-20/A - Pediatria generale e specialistica, high throughput sequencing, whole exome sequencing, sanger sequencing

File Description: application/pdf

Access URL: https://pubmed.ncbi.nlm.nih.gov/39622296
https://hdl.handle.net/11588/999635
https://hdl.handle.net/20.500.11768/183196
https://doi.org/10.1016/j.jaci.2024.11.030
https://hdl.handle.net/11379/622607
https://doi.org/10.1016/j.jaci.2024.11.030
https://hdl.handle.net/2108/394513
https://doi.org/10.1016/j.jaci.2024.11.030
https://hdl.handle.net/11585/1007246
https://www.jacionline.org/article/S0091-6749(24)01282-X/fulltext
https://doi.org/10.1016/j.jaci.2024.11.030

DNA metabarcoding reveals the influence of land cover and farming on the dietary composition of a spider-specialist bat

Authors: Vallejo, Nerea Aldasoro, Miren Olasagasti, Lander et al.

Contributors: Vallejo, Nerea Aldasoro, Miren Olasagasti, Lander et al.

Source: 9:1-24

Subject Terms: adaptations, Araneidae, filth flies, high throughput sequencing, human altered environment, livestock pest, Myotis emarginatus

Access URL: https://www.biodiversitylibrary.org/part/430889

DNA barcoding and species delimitation of crickets, katydids, and grasshoppers (Orthoptera) from Central and Southern Europe, with focus on the Mediterranean Basin

Authors: Mattia Ragazzini Roy M. J. C. Kleukers Luc Willemse et al.

Source: Arthropod Systematics & Phylogeny, Vol 83, Iss, Pp 211-230 (2025)
Arthropod Systematics & Phylogeny 83: 211-230

Subject Terms: endemism, Science, ILS (Incomplete Lineage Sorting), HGT (Horizontal Gene Transfer), HTS (High-Throughput Sequencing), BOLD (Barcoding Of Life Data), Mediterranean area, MOTU (Molecularly defined Operational Taxonomic Unit), COI (Cytochrome C Oxidase subunit 1)

File Description: text/html

Access URL: https://doaj.org/article/62afe999e72a4840bd0671e066455326
https://arthropod-systematics.arphahub.com/article/138238/
https://doi.org/10.3897/asp.83.e138238
https://arthropod-systematics.arphahub.com/article/138238/download/pdf/

The coding mitochondrial genome of crayfish Cambarellus patzcuarensis (Cambaridae, Decapoda) with phylogenetic analysis

Authors: Chao Peng Xianzhen Luo Gaojie Chen et al.

Source: Mitochondrial DNA B Resour
Mitochondrial DNA. Part B. Resources, Vol 10, Iss 7, Pp 602-605 (2025)

Subject Terms: Cambarellus patzcuarensis, Mitogenome Report, Genetics, high-throughput sequencing, QH426-470, phylogeny, Coding mitogenome

Access URL: https://doaj.org/article/f17f6639897b49879e7a026537e87494

Advances in CRISPR‐Cas9 in lineage tracing of model animals

Authors: Jingchao Cao Zihang Guo Xueling Xu et al.

Source: Animal Model Exp Med
Animal Models and Experimental Medicine, Vol 8, Iss 6, Pp 1004-1022 (2025)

Subject Terms: Medicine (General), R5-920, xenotransplantation, high‐throughput sequencing, cell lineage tracing, DNA barcoding, Regular Article, CRISPR‐Cas9

Access URL: https://doaj.org/article/787f1a23305645a1a9c17ad21b386746

Development and Validation of a Suite of E-Probes for Electronic Diagnostic Nucleic Acid Analysis (EDNA) for 20 Graft-Transmissible Pathogens of Citrus Using MiFi and Blind Ring Testing Among Novice Users

Authors: D. M. Nascimento S. Bodaghi H. Wang et al.

Source: PhytoFrontiers, Vol 5, Iss 2, Pp 243-253 (2025)

Subject Terms: limit of detection, QK1-989, Botany, Plant culture, high-throughput sequencing (HTS), pathogen detection, MiFi, SB1-1110

Access URL: https://doaj.org/article/2474242efc9243c6964c79ea1147cf28

An Attempt Toward the Global Screening of Soybean Viruses Using EDNA-MiFi-Based Electronic Probes

Authors: Marcos R. Ribeiro-Junior Andres Espindola Daniele M. Nascimento et al.

Source: PhytoFrontiers, Vol 5, Iss 2, Pp 236-242 (2025)

Subject Terms: plant virus, QK1-989, detection, Botany, high-throughput sequencing, Plant culture, e-probe, MiFi, SB1-1110

Access URL: https://doaj.org/article/b8d38d904b84484aa1780fc9019150cc

Validation of high-throughput sequencing-based test system for detection of microsatellite instability in colorectal cancer samples

Authors: A. A. Lebedeva A. N. Taraskina A. I. Kavun et al.

Source: Успехи молекулярной онкологии, Vol 12, Iss 1, Pp 41-52 (2025)

Subject Terms: next generation sequencing, microsatellite, high-throughput sequencing, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

Access URL: https://doaj.org/article/b193d2509dd844c7b9140e892ab4cc27

Dietary fibre intervention in Hashimoto's thyroiditis patients and its impact on the gut microbiota

Authors: Zhang Jiayin Zhang Meizhu Zhang Yi et al.

Source: Clinical Nutrition Open Science, Vol 60, Iss, Pp 250-261 (2025)

Subject Terms: High-throughput sequencing, Hashimoto's thyroiditis, Nutrition. Foods and food supply, 16S rDNA, Dietary fibre, TX341-641, Gut microbiota

Access URL: https://doaj.org/article/42c8391f96da48fca770f87f733a9d69

Sympatric Populations of Crop and Wild Carrots (Daucus carota subsp.) Have Distinct Viromes, with Shared Core Species More Prevalent in Farm-Grown Populations

Authors: Schönegger, Deborah Marais, Armelle Arenal, Fernando Garcia et al.

Contributors: Schönegger, Deborah Marais, Armelle Arenal, Fernando Garcia et al.

Source: Digital.CSIC. Repositorio Institucional del CSIC
Consejo Superior de Investigaciones Científicas (CSIC)
Phytobiomes Journal, Vol 9, Iss 1, Pp 8-20 (2025)

Subject Terms: reservoir, virome, High-throughput sequencing, Virome, QR100-130, high-throughput sequencing, Plant culture, dsRNA, SB1-1110, [SDV] Life Sciences [q-bio], Microbial ecology, viral fluxes, QK900-989, Viral fluxes, Plant ecology, Reservoir

File Description: application/pdf

Access URL: http://hdl.handle.net/10261/395941
https://api.elsevier.com/content/abstract/scopus_id/105001543538
https://doaj.org/article/78b039dab9a04a2a8c255abaad52fa90
https://hal.inrae.fr/hal-05125724v1/document
https://hal.inrae.fr/hal-05125724v1
https://doi.org/10.1094/pbiomes-06-24-0062-r

Targeted Chromosome Conformation Capture (HiCap)

Authors: Zhigulev, Artemy Sahlén, Pelin

Source: Spatial Genome Organization Methods in Molecular Biology book series. :75-94

Subject Terms: Capture Hi-C, Chromosome conformation capture, Enhancer, HiCap, Promoter, Targeted sequencing, chromosome, enhancer region, high throughput sequencing, promoter region, protein conformation, chromatin, conformation, genetics, genomics, procedures, Chromosomes, High-Throughput Nucleotide Sequencing, Molecular Conformation, Promoter Regions, Genetic

File Description: electronic

Access URL: https://urn.kb.se/resolve?urn=urn:nbn:se:kth:diva-326192
https://kth.diva-portal.org/smash/get/diva2:1753966/FULLTEXT01.pdf