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Considerations and recommendations from the ISMRM diffusion study group for preclinical diffusion MRI: Part 2—Ex vivo imaging: Added value and acquisition: Part 2—Ex vivo imaging: Added value and acquisition

Autoren: Schilling, Kurt G. Grussu, Francesco Ianus, Andrada et al.

Weitere Verfasser: Schilling, Kurt G. Grussu, Francesco Ianus, Andrada et al.

Quelle: Magn Reson Med
Scientia
Scientia. Dipòsit d'Informació Digital del Departament de Salut
instname
Magnetic resonance in medicine, vol. 93, no. 6, pp. 2535-2560
Magnetic resonance in medicine
Schilling, K G, Grussu, F, Ianus, A, Hansen, B, Howard, A FD, Barrett, R L C, Aggarwal, M, Michielse, S, Nasrallah, F, Syeda, W, Wang, N, Veraart, J, Roebroeck, A, Bagdasarian, A F, Eichner, C, Sepehrband, F, Zimmermann, J, Soustelle, L, Bowman, C, Tendler, B C, Hertanu, A, Jeurissen, B, Frydman, L, van de Looij, Y, Hike, D, Dunn, J F, Miller, K, Landman, B A, Shemesh, N, Anderson, A, McKinnon, E, Farquharson, S, Acqua, F D, Pierpaoli, C, Drobnjak, I, Leemans, A, Harkins, K D, Descoteaux, M, Xu, D, Huang, H, Santin, M D, Grant, S C, Obenaus, A, Kim, G S, Wu, D, Bihan, D L, Blackband, S J, Ciobanu, L, Fieremans, E, Bai, R, Leergaard, T, Zhang, J, Dyrby, T B, Johnson, G A, Cohen-Adad, J, Budde, M D & Jelescu, I O 2025, 'Considerations and recommendations from the ISMRM Diffusion Study Group for preclinical diffusion MRI : Part 2--Ex vivo imaging: added value and acquisition', Magnetic Resonance in Medicine, vol. 93, no. 6, pp. 2535-2560. https://doi.org/10.1002/mrm.30435
Schilling, K G, Grussu, F, Ianus, A, Hansen, B, Howard, A F D, Barrett, R L C, Aggarwal, M, Michielse, S, Nasrallah, F, Syeda, W, Wang, N, Veraart, J, Roebroeck, A, Bagdasarian, A F, Eichner, C, Sepehrband, F, Zimmermann, J, Soustelle, L, Bowman, C, Tendler, B C, Hertanu, A, Jeurissen, B, Verhoye, M, Frydman, L, van de Looij, Y, Hike, D, Dunn, J F, Miller, K, Landman, B A, Shemesh, N, Anderson, A, McKinnon, E, Farquharson, S, Dell'Acqua, F, Pierpaoli, C, Drobnjak, I, Leemans, A, Harkins, K D, Descoteaux, M, Xu, D, Huang, H, Santin, M D, Grant, S C, Obenaus, A, Kim, G S, Wu, D, Le Bihan, D, Blackband, S J, Ciobanu, L, Fieremans, E, Bai, R, Leergaard, T B, Zhang, J, Dyrby, T B, Johnson, G A, Cohen-Adad, J, Budde, M D & Jelescu, I O 2025, 'Considerations and recommendations from the ISMRM diffusion study group for preclinical diffusion MRI : Part 2-Ex vivo imaging: Added value and acquisition', Magnetic Resonance in Medicine, vol. 93, no. 6, pp. 2535-2560. https://doi.org/10.1002/mrm.30435

Schlagwörter: q-bio.TO, TÉCNICAS Y EQUIPOS ANALÍTICOS, DIAGNÓSTICOS Y TERAPÉUTICOS::diagnóstico::técnicas y procedimientos diagnósticos::diagnóstico por imagen::tomografía::imagen por resonancia magnética::imagen de resonancia magnética de difusión, tractography, Review, physics.med-ph, Signal-To-Noise Ratio, Diffusion Magnetic Resonance Imaging/methods, Brain/diagnostic imaging, Animals, Image Processing, Computer-Assisted/methods, Humans, Reproducibility of Results, acquisition, best practices, diffusion MRI, diffusion tensor, ex vivo, microstructure, open science, preclinical, processing, 0302 clinical medicine, TENSOR MICROSCOPY, Image Processing, Computer-Assisted, ANATOMÍA::sistema nervioso::sistema nervioso central::encéfalo, Tissues and Organs (q-bio.TO), IN-VIVO, T-2 RELAXATION, MOUSE-BRAIN, Preclinical and Clinical Imaging, Animals de laboratori, Otros calificadores::Otros calificadores::Otros calificadores::/diagnóstico por imagen, Other subheadings::Other subheadings::Other subheadings::/diagnostic imaging, Brain, WATER DIFFUSION, ORGANISMOS::Eukaryota::animales, ANATOMY::Nervous System::Central Nervous System::Brain, AXON DIAMETER, WHITE-MATTER, FOS: Physical sciences, WAXHOLM SPACE ATLAS, 03 medical and health sciences, MAGNETIC-RESONANCE MICROSCOPY, Imatges - Processament, ANALYTICAL, DIAGNOSTIC AND THERAPEUTIC TECHNIQUES, AND EQUIPMENT::Diagnosis::Diagnostic Techniques and Procedures::Diagnostic Imaging::Tomography::Magnetic Resonance Imaging::Diffusion Magnetic Resonance Imaging, Journal Article, POSTMORTEM HUMAN BRAINS, Computer. Automation, ORGANISMS::Eukaryota::Animals, INFORMATION SCIENCE::Information Science::Computing Methodologies::Image Processing, Computer-Assisted, Quantitative Biology - Tissues and Organs, Cervell - Imatgeria, Physics - Medical Physics, CIENCIA DE LA INFORMACIÓN::Ciencias de la información::metodologías computacionales::procesamiento de imágenes asistido por ordenador, Diffusion Magnetic Resonance Imaging, FOS: Biological sciences, Imatgeria per ressonància magnètica, Human medicine, Medical Physics (physics.med-ph)

Dateibeschreibung: application/pdf

Zugangs-URL: https://pubmed.ncbi.nlm.nih.gov/40035293
http://arxiv.org/abs/2209.13371
http://hdl.handle.net/11351/13141
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https://doi.org/10.1002/mrm.30435
https://pure.au.dk/ws/files/420524020/2209.13371v3.pdf

Considerations and recommendations from the ISMRM diffusion study group for preclinical diffusion MRI: Part 1: In vivo small‐animal imaging

Autoren: Jelescu, Ileana O. Grussu, Francesco Ianus, Andrada et al.

Weitere Verfasser: Jelescu, Ileana O. Grussu, Francesco Ianus, Andrada et al.

Quelle: Magn Reson Med
Scientia
Scientia. Dipòsit d'Informació Digital del Departament de Salut
instname
Magnetic resonance in medicine, vol. 93, no. 6, pp. 2507-2534
Magnetic resonance in medicine
Jelescu, I O, Grussu, F, Ianus, A, Hansen, B, Barrett, R L C, Aggarwal, M, Michielse, S, Nasrallah, F, Syeda, W, Wang, N, Veraart, J, Roebroeck, A, Bagdasarian, A F, Eichner, C, Sepehrband, F, Zimmermann, J, Soustelle, L, Bowman, C, Tendler, B C, Hertanu, A, Jeurissen, B, Verhoye, M, Frydman, L, van de Looij, Y, Hike, D, Dunn, J F, Miller, K, Landman, B A, Shemesh, N, Anderson, A, McKinnon, E, Farquharson, S, Acqua, F D, Pierpaoli, C, Drobnjak, I, Leemans, A, Harkins, K D, Descoteaux, M, Xu, D, Huang, H, Santin, M D, Grant, S C, Obenaus, A, Kim, G S, Wu, D, Bihan, D L, Blackband, S J, Ciobanu, L, Fieremans, E, Bai, R, Leergaard, T B, Zhang, J, Dyrby, T B, Johnson, G A, Cohen-Adad, J, Budde, M D & Schilling, K G 2025, ' Considerations and Recommendations from the ISMRM Diffusion Study Group for preclinical diffusion MRI : Part 1--In vivo small-animal imaging ', Magnetic Resonance in Medicine .
Jelescu, I O, Grussu, F, Ianus, A, Hansen, B, Barrett, R L C, Aggarwal, M, Michielse, S, Nasrallah, F, Syeda, W, Wang, N, Veraart, J, Roebroeck, A, Bagdasarian, A F, Eichner, C, Sepehrband, F, Zimmermann, J, Soustelle, L, Bowman, C, Tendler, B C, Hertanu, A, Jeurissen, B, Verhoye, M, Frydman, L, van de Looij, Y, Hike, D, Dunn, J F, Miller, K, Landman, B A, Shemesh, N, Anderson, A, McKinnon, E, Farquharson, S, Dell'Acqua, F, Pierpaoli, C, Drobnjak, I, Leemans, A, Harkins, K D, Descoteaux, M, Xu, D, Huang, H, Santin, M D, Grant, S C, Obenaus, A, Kim, G S, Wu, D, Le Bihan, D, Blackband, S J, Ciobanu, L, Fieremans, E, Bai, R, Leergaard, T B, Zhang, J, Dyrby, T B, Johnson, G A, Cohen-Adad, J, Budde, M D & Schilling, K G 2025, 'Considerations and recommendations from the ISMRM diffusion study group for preclinical diffusion MRI : Part 1: In vivo small-animal imaging', Magnetic Resonance in Medicine, vol. 93, no. 6, pp. 2507-2534. https://doi.org/10.1002/mrm.30429
Magnetic Resonance in Medicine

Schlagwörter: small animal, q-bio.TO, TÉCNICAS Y EQUIPOS ANALÍTICOS, DIAGNÓSTICOS Y TERAPÉUTICOS::diagnóstico::técnicas y procedimientos diagnósticos::diagnóstico por imagen::tomografía::imagen por resonancia magnética::imagen de resonancia magnética de difusión, Image Processing, Computer-Assisted/methods, diffusion tensor, microstructure, tractography, FOS: Physical sciences, Review, physics.med-ph, ORGANISMOS::Eukaryota::animales::Chordata::vertebrados::mamíferos::Eutheria::Rodentia::Muridae::Murinae::ratones, diffusion MRI, Mice, 03 medical and health sciences, 0302 clinical medicine, Imatges - Processament, ANALYTICAL, DIAGNOSTIC AND THERAPEUTIC TECHNIQUES, AND EQUIPMENT::Diagnosis::Diagnostic Techniques and Procedures::Diagnostic Imaging::Tomography::Magnetic Resonance Imaging::Diffusion Magnetic Resonance Imaging, open science, preclinical, Animals, Diffusion Magnetic Resonance Imaging/methods, Brain/diagnostic imaging, Software, Reproducibility of Results, acquisition, best practices, processing, Journal Article, Image Processing, Computer-Assisted, Tissues and Organs (q-bio.TO), Rates (Animals de laboratori), Computer. Automation, Preclinical and Clinical Imaging, INFORMATION SCIENCE::Information Science::Computing Methodologies::Image Processing, Computer-Assisted, Brain, Quantitative Biology - Tissues and Organs, Physics - Medical Physics, CIENCIA DE LA INFORMACIÓN::Ciencias de la información::metodologías computacionales::procesamiento de imágenes asistido por ordenador, Diffusion Magnetic Resonance Imaging, FOS: Biological sciences, Imatgeria per ressonància magnètica, Human medicine, Medical Physics (physics.med-ph), ORGANISMS::Eukaryota::Animals::Chordata::Vertebrates::Mammals::Eutheria::Rodentia::Muridae::Murinae::Mice

Dateibeschreibung: application/pdf

Zugangs-URL: https://pubmed.ncbi.nlm.nih.gov/40008568
http://arxiv.org/abs/2209.12994
http://hdl.handle.net/11351/12973
https://dspace.library.uu.nl/handle/1874/461039
https://serval.unil.ch/resource/serval:BIB_7D54D697DFE6.P001/REF.pdf
https://serval.unil.ch/notice/serval:BIB_7D54D697DFE6
http://nbn-resolving.org/urn/resolver.pl?urn=urn:nbn:ch:serval-BIB_7D54D697DFE68
https://repository.uantwerpen.be/docstore/d:irua:28141
https://hdl.handle.net/10067/2133370151162165141
https://pure.au.dk/portal/en/publications/336f06f8-b082-4fd9-a2de-760051ac1ff7

Reproducibility of proton density fat fraction assessment of thigh muscle in a multi-site, multi-vendor cohort study at 10 years after anterior cruciate ligament reconstruction

Autoren: Eck, Brendan L. Gaj, Sibaji Lartey, Richard et al.

Quelle: Quant Imaging Med Surg

Schlagwörter: Original Article

Zugangs-URL: https://pubmed.ncbi.nlm.nih.gov/39698646

Improved Image Reconstruction and Diffusion Parameter Estimation Using a Temporal Convolutional Network Model of Gradient Trajectory Errors

Autoren: Martin, Jonathan B. Alderson, Hannah E. Gore, John C. et al.

Schlagwörter: FOS: Computer and information sciences, Medical Physics, Artificial Intelligence (cs.AI), Artificial Intelligence, FOS: Physical sciences, Medical Physics (physics.med-ph)

Zugangs-URL: http://arxiv.org/abs/2506.14995

Modeling the MRI gradient system with a temporal convolutional network: Improved reconstruction by prediction of readout gradient errors

Autoren: Martin, Jonathan B. Alderson, Hannah E. Gore, John C. et al.

Weitere Verfasser: Martin, Jonathan B. Alderson, Hannah E. Gore, John C. et al.

Quelle: Magnetic Resonance in Medicine ; ISSN 0740-3194 1522-2594

Verfügbarkeit: https://doi.org/10.1002/mrm.70044
https://onlinelibrary.wiley.com/doi/pdf/10.1002/mrm.70044

MATI: A GPU-accelerated toolbox for microstructural diffusion MRI simulation and data fitting with a graphical user interface

Autoren: Xu, Junzhong Devan, Sean P. Shi, Diwei et al.

Weitere Verfasser: Xu, Junzhong Devan, Sean P. Shi, Diwei et al.

Quelle: Magnetic Resonance Imaging ; volume 122, page 110428 ; ISSN 0730-725X

Verfügbarkeit: https://doi.org/10.1016/j.mri.2025.110428
https://api.elsevier.com/content/article/PII:S0730725X25001122?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S0730725X25001122?httpAccept=text/plain

Considerations and recommendations from the ISMRM Diffusion Study Group for preclinical diffusion MRI:Part 3-Ex vivo imaging: Data processing, comparisons with microscopy, and tractography

Autoren: Schilling, Kurt G. Howard, Amy F. D. Grussu, Francesco et al.

Quelle: Schilling, K G, Howard, A F D, Grussu, F, Ianus, A, Hansen, B, Barrett, R L C, Aggarwal, M, Michielse, S, Nasrallah, F, Syeda, W, Wang, N, Veraart, J, Roebroeck, A, Bagdasarian, A F, Eichner, C, Sepehrband, F, Zimmermann, J, Soustelle, L, Bowman, C, Tendler, B C, Hertanu, A, Jeurissen, B, Verhoye, M, Frydman, L, van de Looij, Y, Hike, D, Dunn, J F, Miller, K, Landman, B A, Shemesh, N, Anderson, A, Mckinnon, E, Farquharson, S, Dell'Acqua, F, Pierpaoli, C, Drobnjak, I, Leemans, A, Harkins, K D, Descoteaux, M, Xu, D, Huang, H, Santin, M D, Grant, S ....

Schlagwörter: acquisition, best practices, diffusion MRI, diffusion tensor, ex vivo, microstructure, open science, preclinical, processing, tractography, MAGNETIC-RESONANCE MICROSCOPY, AXON DIAMETER DISTRIBUTION, STRUCTURE TENSOR ANALYSIS, WHITE-MATTER, HISTOLOGICAL VALIDATION, SPINAL-CORD, ORIENTATION DISPERSION, ANATOMICAL ACCURACY, LIGHT-MICROSCOPY, NERVOUS-TISSUE

Relation: info:eu-repo/semantics/altIdentifier/wos/001432307300001; info:eu-repo/semantics/altIdentifier/pissn/0740-3194; info:eu-repo/semantics/altIdentifier/eissn/1522-2594

Verfügbarkeit: https://cris.maastrichtuniversity.nl/en/publications/2e05c21d-a077-4c26-a00b-c6daa4e335f9
https://doi.org/10.1002/mrm.30424
https://www.scopus.com/pages/publications/85219588052

Considerations and recommendations from the ISMRM Diffusion Study Group for preclinical diffusion MRI: Part 3—Ex vivo imaging: Data processing, comparisons with microscopy, and tractography

Autoren: Schilling, Kurt G. Howard, Amy F.D. Grussu, Francesco et al.

Weitere Verfasser: Schilling, Kurt G. Howard, Amy F.D. Grussu, Francesco et al.

Schlagwörter: acquisition, best practices, diffusion MRI, diffusion tensor, ex vivo, microstructure, open science, preclinical, processing, tractography, Radiology Nuclear Medicine and imaging

Dateibeschreibung: application/pdf

Relation: https://dspace.library.uu.nl/handle/1874/460842

Verfügbarkeit: https://dspace.library.uu.nl/handle/1874/460842

Considerations and recommendations from the ISMRM diffusion study group for preclinical diffusion MRI : part 2-Ex vivo imaging: added value and acquisition

Autoren: Schilling, Kurt G. Grussu, Francesco Ianus, Andrada et al.

Quelle: 0740-3194 ; Magnetic resonance in medicine

Schlagwörter: Human medicine, Computer. Automation

Relation: info:eu-repo/semantics/altIdentifier/isi/001437069700001

Verfügbarkeit: https://hdl.handle.net/10067/2133410151162165141
https://repository.uantwerpen.be/docstore/d:irua:28144

Implantable, Bioresorbable Radio Frequency Resonant Circuits for Magnetic Resonance Imaging (Adv. Sci. 27/2024)

Autoren: Lee, Geumbee Does, Mark D. Avila, Raudel et al.

Quelle: Adv Sci (Weinh)

Schlagwörter: Back Cover

MATI: A GPU-Accelerated Toolbox for Microstructural Diffusion MRI Simulation and Data Fitting with a User-Friendly GUI

Autoren: Xu, Junzhong Devan, Sean P. Shi, Diwei et al.

Schlagwörter: FOS: Physical sciences, Medical Physics (physics.med-ph), Physics - Medical Physics

Zugangs-URL: http://arxiv.org/abs/2411.04401

Joint estimation of compartment‐specific T 2 relaxation and tumor microstructure using multi‐TE IMPULSED MRI

Autoren: Jiang, Xiaoyu Harkins, Kevin D. Xie, Jingping et al.

Weitere Verfasser: Jiang, Xiaoyu Harkins, Kevin D. Xie, Jingping et al.

Quelle: Magnetic Resonance in Medicine ; volume 93, issue 1, page 96-107 ; ISSN 0740-3194 1522-2594

Verfügbarkeit: http://dx.doi.org/10.1002/mrm.30254
https://onlinelibrary.wiley.com/doi/pdf/10.1002/mrm.30254

Considerations and recommendations from the ISMRM diffusion study group for preclinical diffusion MRI: Part 1: In vivo small-animal imaging.

Autoren: Jelescu, Ileana Grussu, Francesco Ianuş, Andrada et al.

Quelle: PolyPublie

Index Begriffe: Article de revue, PeerReviewed

URL: https://publications.polymtl.ca/63013/1/2025_Jelescu_Considerations_recommendations_from_ISMRM_diffusion.pdf
https://publications.polymtl.ca/63013/
https://onlinelibrary.wiley.com/doi/10.1002/mrm.30429
https://publications.polymtl.ca/63013
https://onlinelibrary.wiley.com/doi/10.1002/mrm.30429
10.1002/mrm.30429

Considerations and recommendations from the ISMRM Diffusion Study Group for preclinical diffusion MRI: Part 3—Ex vivo imaging: Data processing, comparisons with microscopy, and tractography

Autoren: Beeldverwerking ISI Brain Cancer et al.

URL: https://doi.org/10.1002/mrm.30424
http://hdl.handle.net/1874/460842
https://dspace.library.uu.nl/handle/1874/460842
http://www.scopus.com/inward/record.url?scp=85219588052&partnerID=8YFLogxK
0740-3194
Magnetic Resonance in Medicine
93
6
2561
2582

Considerations and recommendations from the ISMRM diffusion study group for preclinical diffusion MRI: Part 2-Ex vivo imaging: Added value and acquisition

Autoren: Beeldverwerking ISI Brain Cancer et al.

URL: https://doi.org/10.1002/mrm.30435
http://hdl.handle.net/1874/461037
https://dspace.library.uu.nl/handle/1874/461037
0740-3194
Magnetic Resonance in Medicine
93
6
2535
2560

Considerations and recommendations from the ISMRM diffusion study group for preclinical diffusion MRI: Part 1: In vivo small-animal imaging

Autoren: Beeldverwerking ISI Brain Cancer et al.

URL: https://doi.org/10.1002/mrm.30429
http://hdl.handle.net/1874/461039
https://dspace.library.uu.nl/handle/1874/461039
0740-3194
Magnetic Resonance in Medicine
93
6
2507
2534

Evaluation of diffusion time–dependent changes in radial diffusivity as a surrogate for axon diameter.

Autoren: Alderson, Hannah E. Does, Mark D. Hutchinson, Elizabeth B. et al.

Quelle: Magnetic Resonance in Medicine; Sep2025, Vol. 94 Issue 3, p1248-1256, 9p

Schlagwörter: SCANNING electron microscopy, SPINAL cord, MYELIN, AXONS, MAGNETIC resonance imaging

Implantable, Bioresorbable Radio Frequency Resonant Circuits for Magnetic Resonance Imaging

Autoren: Lee, Geumbee Does, Mark D. Avila, Raudel et al.

Weitere Verfasser: Lee, Geumbee Does, Mark D. Avila, Raudel et al.

Quelle: Advanced Science ; volume 11, issue 27 ; ISSN 2198-3844 2198-3844

Verfügbarkeit: http://dx.doi.org/10.1002/advs.202301232
https://onlinelibrary.wiley.com/doi/pdf/10.1002/advs.202301232

R1ρ dispersion in white matter correlates with quantitative metrics of cognitive impairment

Autoren: Adelnia, Fatemeh Davis, Larry T. Acosta, Lealani Mae et al.

Weitere Verfasser: Adelnia, Fatemeh Davis, Larry T. Acosta, Lealani Mae et al.

Quelle: NeuroImage: Clinical ; volume 37, page 103366 ; ISSN 2213-1582

Verfügbarkeit: http://dx.doi.org/10.1016/j.nicl.2023.103366
https://api.elsevier.com/content/article/PII:S2213158223000554?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S2213158223000554?httpAccept=text/plain

A simple estimate of axon size with diffusion MRI

Autoren: Harkins, Kevin D Beaulieu, Christian Xu, Junzhong et al.

Weitere Verfasser: Harkins, Kevin D Beaulieu, Christian Xu, Junzhong et al.

Quelle: NeuroImage ; volume 227, page 117619 ; ISSN 1053-8119

Verfügbarkeit: http://dx.doi.org/10.1016/j.neuroimage.2020.117619
https://api.elsevier.com/content/article/PII:S1053811920311046?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S1053811920311046?httpAccept=text/plain