Suchergebnisse - "Haplotypes"

Polymorphisms and haplotypes of TOLLIP and MUC5B are associated with susceptibility and survival in patients with fibrotic hypersensitivity pneumonitis.

Autoren: Mota PC Soares ML Ferreira AC et al.

Quelle: Pulmonology [Pulmonology] 2025 Dec 31; Vol. 31 (1), pp. 2416788. Date of Electronic Publication: 2024 Oct 24.

Publikationsart: Journal Article

Info zur Zeitschrift: Publisher: Taylor & Francis Country of Publication: United States NLM ID: 101723786 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2531-0437 (Electronic) Linking ISSN: 25310429 NLM ISO Abbreviation: Pulmonology Subsets: MEDLINE

MeSH-Schlagworte: Mucin-5B*/genetics , Haplotypes* , Polymorphism, Single Nucleotide* , Genetic Predisposition to Disease* , Alveolitis, Extrinsic Allergic*/genetics , Alveolitis, Extrinsic Allergic*/diagnosis , Intracellular Signaling Peptides and Proteins*/genetics, Humans ; Male ; Female ; Case-Control Studies ; Middle Aged ; Aged ; Portugal/epidemiology ; Gene Frequency ; Idiopathic Pulmonary Fibrosis/genetics ; Idiopathic Pulmonary Fibrosis/mortality

Haplotype network analyses, genetic diversity, and population structure of Hyalomma anatolicum based on cytochrome c oxidase subunit I (COI) and the large subunit ribosomal RNA (16S rRNA).

Autoren: Khan Z Khan M Khan SB et al.

Quelle: Parasitology research [Parasitol Res] 2025 Nov 25; Vol. 124 (11), pp. 142. Date of Electronic Publication: 2025 Nov 25.

Publikationsart: Journal Article

Info zur Zeitschrift: Publisher: Springer International Country of Publication: Germany NLM ID: 8703571 Publication Model: Electronic Cited Medium: Internet ISSN: 1432-1955 (Electronic) Linking ISSN: 09320113 NLM ISO Abbreviation: Parasitol Res Subsets: MEDLINE

MeSH-Schlagworte: RNA, Ribosomal, 16S*/genetics , Haplotypes* , Genetic Variation* , Electron Transport Complex IV*/genetics , Ixodidae*/genetics , Ixodidae*/classification , Ixodidae*/enzymology, Animals ; Phylogeny ; Cattle ; DNA, Ribosomal/genetics ; DNA, Ribosomal/chemistry ; Sheep ; Pakistan ; Sequence Analysis, DNA ; Buffaloes/parasitology

Fast and Memory-Efficient Dynamic Programming Approach for Large-Scale EHH-Based Selection Scans.

Autoren: Rahman A Smith TQ Szpiech ZA

Quelle: Molecular biology and evolution [Mol Biol Evol] 2025 Oct 29; Vol. 42 (11).

Publikationsart: Journal Article

Info zur Zeitschrift: Publisher: Oxford University Press Country of Publication: United States NLM ID: 8501455 Publication Model: Print Cited Medium: Internet ISSN: 1537-1719 (Electronic) Linking ISSN: 07374038 NLM ISO Abbreviation: Mol Biol Evol Subsets: MEDLINE

MeSH-Schlagworte: Haplotypes* , Homozygote* , Selection, Genetic*, Humans ; Algorithms ; Software ; Computer Simulation ; Models, Genetic ; Dynamic Programming

UAV-based multispectral image analysis revealed stay-green haplotypes in wheat specific for different soil nitrogen levels.

Autoren: Behn H Ballvora A Bendig J et al.

Quelle: BMC plant biology [BMC Plant Biol] 2025 Oct 21; Vol. 25 (1), pp. 1405. Date of Electronic Publication: 2025 Oct 21.

Publikationsart: Journal Article

Info zur Zeitschrift: Publisher: BioMed Central Country of Publication: England NLM ID: 100967807 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2229 (Electronic) Linking ISSN: 14712229 NLM ISO Abbreviation: BMC Plant Biol Subsets: MEDLINE

MeSH-Schlagworte: Triticum*/genetics , Triticum*/physiology , Triticum*/growth & development , Triticum*/metabolism , Nitrogen*/metabolism , Nitrogen*/analysis , Haplotypes* , Soil*/chemistry, Plant Leaves/genetics ; Plant Leaves/physiology ; Plant Senescence/genetics ; Unmanned Aerial Devices ; Chlorophyll/metabolism ; Phenotype ; Photosynthesis

Enhancing the sensitivity of non-invasive cervical cancer detection using CpG methylation haplotype profiling.

Autoren: David C El-Zein M Franco EL et al.

Quelle: Scientific reports [Sci Rep] 2025 Oct 15; Vol. 15 (1), pp. 36057. Date of Electronic Publication: 2025 Oct 15.

Publikationsart: Journal Article

Info zur Zeitschrift: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN: 2045-2322 (Electronic) Linking ISSN: 20452322 NLM ISO Abbreviation: Sci Rep Subsets: MEDLINE

MeSH-Schlagworte: Uterine Cervical Neoplasms*/genetics , Uterine Cervical Neoplasms*/diagnosis , Uterine Cervical Neoplasms*/pathology , DNA Methylation* , Haplotypes* , CpG Islands*/genetics, Humans ; Female ; Biomarkers, Tumor/genetics ; Sensitivity and Specificity ; Middle Aged ; High-Throughput Nucleotide Sequencing ; Adult

The Distribution of HLA-DRB4 Alleles Among HLA-DRB1*07:01-Positive Haplotypes in Saudi Arabia.

Autoren: Alandejani SA Uyar FA Alrasheed A et al.

Quelle: International journal of immunogenetics [Int J Immunogenet] 2025 Oct; Vol. 52 (5), pp. 274-277. Date of Electronic Publication: 2025 Jun 29.

Publikationsart: Journal Article

Info zur Zeitschrift: Publisher: Blackwell Pub Country of Publication: England NLM ID: 101232337 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1744-313X (Electronic) Linking ISSN: 17443121 NLM ISO Abbreviation: Int J Immunogenet Subsets: MEDLINE

MeSH-Schlagworte: Haplotypes* , HLA-DRB1 Chains*/genetics , Alleles* , HLA-DRB4 Chains*/genetics, Humans ; Saudi Arabia ; Gene Frequency ; Linkage Disequilibrium ; Male ; Female ; Genetic Predisposition to Disease ; Adult

Haplotype-resolved t2t genome of paliurus hemsleyanus provides insights into rhamnaceae evolution and genome biology.

Autoren: Zhang S Guo J Lin D et al.

Quelle: Communications biology [Commun Biol] 2025 Dec 04; Vol. 8 (1), pp. 1744. Date of Electronic Publication: 2025 Dec 04.

Publikationsart: Journal Article

Info zur Zeitschrift: Publisher: Nature Publishing Group UK Country of Publication: England NLM ID: 101719179 Publication Model: Electronic Cited Medium: Internet ISSN: 2399-3642 (Electronic) Linking ISSN: 23993642 NLM ISO Abbreviation: Commun Biol Subsets: MEDLINE

MeSH-Schlagworte: Genome, Plant* , Haplotypes* , Evolution, Molecular* , Telomere*/genetics, Phylogeny

Graph-based deep reinforcement learning for haplotype assembly with Ralphi.

Autoren: Battistella E Maheshwari A Ekim B et al.

Quelle: Genome research [Genome Res] 2025 Dec 03; Vol. 35 (12), pp. 2617-2625. Date of Electronic Publication: 2025 Dec 03.

Publikationsart: Journal Article

Info zur Zeitschrift: Publisher: Cold Spring Harbor Laboratory Press Country of Publication: United States NLM ID: 9518021 Publication Model: Electronic Cited Medium: Internet ISSN: 1549-5469 (Electronic) Linking ISSN: 10889051 NLM ISO Abbreviation: Genome Res Subsets: MEDLINE

MeSH-Schlagworte: Haplotypes* , Deep Learning* , Software*, Humans ; Genome, Human ; Algorithms ; Reinforcement Machine Learning

Secure phasing of private genomes in a trusted execution environment with TX-Phase.

Autoren: Dokmai N Zhu K Sahinalp SC et al.

Quelle: Genome research [Genome Res] 2025 Dec 03; Vol. 35 (12), pp. 2626-2636. Date of Electronic Publication: 2025 Dec 03.

Publikationsart: Journal Article

Info zur Zeitschrift: Publisher: Cold Spring Harbor Laboratory Press Country of Publication: United States NLM ID: 9518021 Publication Model: Electronic Cited Medium: Internet ISSN: 1549-5469 (Electronic) Linking ISSN: 10889051 NLM ISO Abbreviation: Genome Res Subsets: MEDLINE

MeSH-Schlagworte: Haplotypes* , Software* , Genomics*/methods , Genome, Human* , Computer Security*, Humans ; Algorithms

Long-read reconstruction of many diverse haplotypes with devider.

Autoren: Shaw J Boucher C Yu YW et al.

Quelle: Genome research [Genome Res] 2025 Dec 03; Vol. 35 (12), pp. 2637-2649. Date of Electronic Publication: 2025 Dec 03.

Publikationsart: Journal Article

Info zur Zeitschrift: Publisher: Cold Spring Harbor Laboratory Press Country of Publication: United States NLM ID: 9518021 Publication Model: Electronic Cited Medium: Internet ISSN: 1549-5469 (Electronic) Linking ISSN: 10889051 NLM ISO Abbreviation: Genome Res Subsets: MEDLINE

MeSH-Schlagworte: Haplotypes* , Algorithms* , Sequence Analysis, DNA*/methods , Software*, Humans ; High-Throughput Nucleotide Sequencing/methods ; HIV-1/genetics

Haplotype analysis and molecular marker development for the cold tolerance gene OsCTS11 at the seedling stage of rice.

Autoren: Yu J Suo S Zhou H et al.

Quelle: TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik [Theor Appl Genet] 2025 Dec 01; Vol. 138 (12), pp. 315. Date of Electronic Publication: 2025 Dec 01.

Publikationsart: Journal Article

Info zur Zeitschrift: Publisher: Springer Country of Publication: Germany NLM ID: 0145600 Publication Model: Electronic Cited Medium: Internet ISSN: 1432-2242 (Electronic) Linking ISSN: 00405752 NLM ISO Abbreviation: Theor Appl Genet Subsets: MEDLINE

MeSH-Schlagworte: Oryza*/genetics , Oryza*/physiology , Oryza*/growth & development , Haplotypes* , Seedlings*/genetics , Seedlings*/growth & development , Genes, Plant* , Plant Proteins*/genetics, Linkage Disequilibrium ; Genetic Markers ; Quantitative Trait Loci ; Polymorphism, Single Nucleotide ; Cold Temperature ; Chromosome Mapping

The effect of haplotype size on genomic selection accuracy and epistasis: An empirical study in rice.

Autoren: Montiel M Moreno-Amores J Punzalan J et al.

Quelle: The plant genome [Plant Genome] 2025 Dec; Vol. 18 (4), pp. e70161.

Publikationsart: Journal Article

Info zur Zeitschrift: Publisher: Crop Science Society of America Country of Publication: United States NLM ID: 101273919 Publication Model: Print Cited Medium: Internet ISSN: 1940-3372 (Electronic) Linking ISSN: 19403372 NLM ISO Abbreviation: Plant Genome Subsets: MEDLINE

MeSH-Schlagworte: Haplotypes* , Epistasis, Genetic* , Oryza*/genetics , Selection, Genetic* , Genome, Plant*, Linkage Disequilibrium ; Quantitative Trait Loci ; Models, Genetic ; Recombination, Genetic ; Plant Breeding

Effect of serotonin receptor gene variants on substance use disorders.

Autoren: Al-Eitan L Abu Kharmah H Alghamdi M

Quelle: Annals of medicine [Ann Med] 2025 Dec; Vol. 57 (1), pp. 2445779. Date of Electronic Publication: 2024 Dec 28.

Publikationsart: Journal Article

Info zur Zeitschrift: Publisher: Informa Healthcare Country of Publication: England NLM ID: 8906388 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1365-2060 (Electronic) Linking ISSN: 07853890 NLM ISO Abbreviation: Ann Med Subsets: MEDLINE

MeSH-Schlagworte: Substance-Related Disorders*/genetics , Substance-Related Disorders*/epidemiology , Polymorphism, Single Nucleotide* , Haplotypes* , Genetic Predisposition to Disease* , Receptors, Serotonin, 5-HT3*/genetics, Humans ; Male ; Adult ; Jordan/epidemiology ; Case-Control Studies ; Receptors, Serotonin/genetics ; Receptor, Serotonin, 5-HT1B/genetics ; Receptor, Serotonin, 5-HT2A/genetics ; Receptor, Serotonin, 5-HT2B/genetics ; Middle Aged ; Young Adult ; Genotype ; Alleles ; Risk Factors

Haplotypes affecting stillbirth and fertility in Icelandic Dairy Cattle.

Autoren: Gautason E Þórarinsdóttir Þ Sahana G

Quelle: Journal of applied genetics [J Appl Genet] 2025 Dec; Vol. 66 (4), pp. 1053-1064. Date of Electronic Publication: 2025 Jun 02.

Publikationsart: Journal Article

Info zur Zeitschrift: Publisher: Springer Country of Publication: England NLM ID: 9514582 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2190-3883 (Electronic) Linking ISSN: 12341983 NLM ISO Abbreviation: J Appl Genet Subsets: MEDLINE

MeSH-Schlagworte: Haplotypes* , Stillbirth*/genetics , Stillbirth*/veterinary , Fertility*/genetics, Animals ; Cattle/genetics ; Genome-Wide Association Study ; Female ; Iceland ; Polymorphism, Single Nucleotide ; Genotype

The haplotype-resolved chromosome-level genome assembly of Spinibarbus caldwelli provides insights into environmental adaptability and disease resistance.

Autoren: Wu Y Li Y Cheng Z et al.

Quelle: Comparative biochemistry and physiology. Part D, Genomics & proteomics [Comp Biochem Physiol Part D Genomics Proteomics] 2025 Dec; Vol. 56, pp. 101611. Date of Electronic Publication: 2025 Aug 19.

Publikationsart: Journal Article

Info zur Zeitschrift: Publisher: Elsevier Country of Publication: Netherlands NLM ID: 101270611 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1878-0407 (Electronic) Linking ISSN: 1744117X NLM ISO Abbreviation: Comp Biochem Physiol Part D Genomics Proteomics Subsets: MEDLINE

MeSH-Schlagworte: Disease Resistance*/genetics , Haplotypes* , Cyprinidae*/genetics , Chromosomes*/genetics , Adaptation, Physiological*/genetics , Genome*, Animals ; Evolution, Molecular

Low-coverage whole-genome sequencing facilitates accurate and cost-effective haplotype reconstruction in complex mouse crosses.

Autoren: Widmayer SJ Wooldridge LK Swanzey E et al.

Quelle: Mammalian genome : official journal of the International Mammalian Genome Society [Mamm Genome] 2025 Dec; Vol. 36 (4), pp. 1063-1080. Date of Electronic Publication: 2025 Jul 01.

Publikationsart: Journal Article

Info zur Zeitschrift: Publisher: Springer-Verlag Country of Publication: United States NLM ID: 9100916 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1432-1777 (Electronic) Linking ISSN: 09388990 NLM ISO Abbreviation: Mamm Genome Subsets: MEDLINE

MeSH-Schlagworte: Haplotypes* , Whole Genome Sequencing*/methods , Whole Genome Sequencing*/economics, Animals ; Mice ; Polymorphism, Single Nucleotide ; Crosses, Genetic ; Quantitative Trait Loci ; Genome ; Genotype ; Cost-Benefit Analysis

Investigating HLA haplotypes as a potential risk factor for nodding syndrome: A case-control study in the Mahenge area, Tanzania.

Autoren: Hadermann A Bhwana D Mhina AD et al.

Quelle: PLoS neglected tropical diseases [PLoS Negl Trop Dis] 2025 Nov 26; Vol. 19 (11), pp. e0012971. Date of Electronic Publication: 2025 Nov 26 (Print Publication: 2025).

Publikationsart: Journal Article

Info zur Zeitschrift: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101291488 Publication Model: eCollection Cited Medium: Internet ISSN: 1935-2735 (Electronic) Linking ISSN: 19352727 NLM ISO Abbreviation: PLoS Negl Trop Dis Subsets: MEDLINE

MeSH-Schlagworte: Nodding Syndrome*/genetics , Nodding Syndrome*/epidemiology , Nodding Syndrome*/immunology , Haplotypes* , Genetic Predisposition to Disease* , Onchocerciasis*/complications , Onchocerciasis*/epidemiology , Onchocerciasis*/genetics , HLA Antigens*/genetics, Humans ; Tanzania/epidemiology ; Case-Control Studies ; Male ; Female ; Child ; Risk Factors ; Adolescent ; Child, Preschool ; Young Adult ; Adult ; Onchocerca volvulus

An updated Pig Haplotype Reference Panel (PHARP 4.0) comprising 13,298 haplotypes.

Autoren: Wang Q Zhang Z Ye X et al.

Quelle: Communications biology [Commun Biol] 2025 Nov 20; Vol. 8 (1), pp. 1625. Date of Electronic Publication: 2025 Nov 20.

Publikationsart: Journal Article

Info zur Zeitschrift: Publisher: Nature Publishing Group UK Country of Publication: England NLM ID: 101719179 Publication Model: Electronic Cited Medium: Internet ISSN: 2399-3642 (Electronic) Linking ISSN: 23993642 NLM ISO Abbreviation: Commun Biol Subsets: MEDLINE

MeSH-Schlagworte: Haplotypes* , Sus scrofa*/genetics, Animals ; Polymorphism, Single Nucleotide ; Genome-Wide Association Study ; Swine/genetics ; Whole Genome Sequencing

Genotype imputation from low-coverage WGS using haplotype reference panels in cultivated strawberry.

Autoren: Koorevaar T Willemsen JH Visser RGF et al.

Quelle: BMC genomics [BMC Genomics] 2025 Nov 19; Vol. 26 (1), pp. 1061. Date of Electronic Publication: 2025 Nov 19.

Publikationsart: Journal Article

Info zur Zeitschrift: Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164 (Electronic) Linking ISSN: 14712164 NLM ISO Abbreviation: BMC Genomics Subsets: MEDLINE

MeSH-Schlagworte: Fragaria*/genetics , Haplotypes* , Whole Genome Sequencing*/methods , Genotyping Techniques*/methods, Genotype ; Polymorphism, Single Nucleotide ; Linkage Disequilibrium ; Genome, Plant ; High-Throughput Nucleotide Sequencing

Haplotype-resolved genome assembly of the leading cultivar of jujube (Ziziphus jujuba Mill. 'Huizao').

Autoren: Yang Y Zhang S Lan Y et al.

Quelle: Scientific data [Sci Data] 2025 Nov 17; Vol. 12 (1), pp. 1800. Date of Electronic Publication: 2025 Nov 17.

Publikationsart: Journal Article; Dataset

Info zur Zeitschrift: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101640192 Publication Model: Electronic Cited Medium: Internet ISSN: 2052-4463 (Electronic) Linking ISSN: 20524463 NLM ISO Abbreviation: Sci Data Subsets: MEDLINE

MeSH-Schlagworte: Ziziphus*/genetics , Haplotypes* , Genome, Plant*, Chromosomes, Plant