Výsledky vyhledávání - "Gene Expression Profiling - methods"
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Zdroj: Communications Biology. 8
Témata: Gene Expression Profiling / methods, Gene Expression Regulation, Neoplastic, Biomarkers, Tumor / genetics, Computational Biology / methods, Neoplasms / pathology, DNA Copy Number Variations, Single-Cell Analysis / methods, Humans, 616.07, Neoplasms / genetics, Transcriptome
Popis souboru: application/pdf
Přístupová URL adresa: https://archive-ouverte.unige.ch/unige:187363
https://doi.org/10.1038/s42003-025-08695-4 -
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Zdroj: Commun Biol
Témata: Microglia/metabolism, Cell Nucleus, Single-Cell Analysis/methods, Neurons/metabolism, Humans, Brain/metabolism, Gene Expression Profiling/methods, Transcriptome, Article
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Zdroj: Breast Cancer Res
Témata: Adult, Neoplastic, Research, Breast Neoplasms/genetics, Middle Aged, Prognosis, Local/genetics, MicroRNAs/genetics, Long Noncoding/genetics, Neoplasm Recurrence, Gene Expression Regulation, Tumor/genetics, Humans, RNA, Messenger/genetics, Female, Gene Expression Profiling/methods, Transcriptome, Biomarkers, Follow-Up Studies, Aged
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Zdroj: Nucleic Acids Res
Nucleic acids research, vol. 53, no. D1, pp. D878-D885Témata: 0301 basic medicine, Internet, 0303 health sciences, Gene Expression Profiling, Molecular Sequence Annotation, Single-Cell Gene Expression Analysis, Animals, Single-Cell Analysis/methods, RNA-Seq/methods, Software, Databases, Genetic, Humans, Gene Expression Profiling/methods, Data Curation, 03 medical and health sciences, Database Issue, RNA-Seq, Single-Cell Analysis
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Zdroj: Nat Cardiovasc Res
Nature cardiovascular research 3(10), 1217-1235 (2024). doi:10.1038/s44161-024-00544-7
Nature cardiovascular research, 3(10):1217-1235
Nature Cardiovascular ResearchTémata: Primates, Induced Pluripotent Stem Cells, Article, Evolution, Molecular, Humans [MeSH], Ribosomes/genetics [MeSH], Primates/genetics [MeSH], Evolution, Molecular [MeSH], Protein Biosynthesis/genetics [MeSH], Animals [MeSH], Induced Pluripotent Stem Cells/metabolism [MeSH], Myocytes, Cardiac/metabolism [MeSH], Ribosomes/metabolism [MeSH], Gene Expression Profiling/methods [MeSH], Transcriptome [MeSH], Cells, Cultured [MeSH], Species Specificity [MeSH], Open Reading Frames/genetics [MeSH], Open Reading Frames, Species Specificity, Animals, Humans, Myocytes, Cardiac, ddc:610, Cells, Cultured, genetics [Protein Biosynthesis], Gene Expression Profiling, genetics [Ribosomes], metabolism [Ribosomes], Molecular Processes and Therapies [Topic 2], genetics [Primates], metabolism [Induced Pluripotent Stem Cells], Cardiovascular and Metabolic Diseases, Protein Biosynthesis, metabolism [Myocytes, Cardiac], Technology Platforms, Genes, Cells and Cell-Based Medicine [Topic 1], Transcriptome, genetics [Open Reading Frames], Ribosomes, methods [Gene Expression Profiling]
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Zdroj: Dig Dis Sci
Digestive Diseases and SciencesTémata: Biliary epithelial cells, Male, Autoimmune liver disorders, In vitro modeling, Gene Expression Profiling, Cholangitis, Sclerosing, Epithelial Cells, Cholangiocarcinoma, Organoids, Single-cell sequencing, Humans, Original Article, Female, Bile Ducts, Cholangiopathies, Female [MeSH], Cholangitis, Sclerosing/genetics [MeSH], Cholangitis, Sclerosing/pathology [MeSH], Organoids/pathology [MeSH], Humans [MeSH], Epithelial Cells/metabolism [MeSH], Bile Ducts/pathology [MeSH], Male [MeSH], Single-Cell Analysis/methods [MeSH], Gene Expression Profiling/methods [MeSH], Transcriptome [MeSH], Epithelial Cells/pathology [MeSH], Organoids/metabolism [MeSH], Single-Cell Analysis, Transcriptome
Popis souboru: application/pdf; application/zip; text/xml
Přístupová URL adresa: https://pubmed.ncbi.nlm.nih.gov/39160386
https://repository.publisso.de/resource/frl:6504309 -
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Zdroj: RNA Biol
RNA Biology, Vol 21, Iss 1, Pp 716-738 (2024)Témata: lariat-derived circRNA, [SDV]Life Sciences [q-bio], circular transcriptome, Genetics & genetic processes, bovine circRNAs, Sequence Analysis, RNA/methods, QH426-470, intron circle, Génétique & processus génétiques, Genetics, Animals, Molecular Biology, artificial annotation, Sequence Analysis, RNA, Gene Expression Profiling, Computational Biology, Cell Biology, RNA, Circular, Exons, Computational Biology/methods, Life sciences, artificial circRNA, Introns, 3. Good health, [SDV] Life Sciences [q-bio], RNA, Circular/genetics, Exonic circRNA, backsplicing, Sciences du vivant, Cattle, Gene Expression Profiling/methods, Transcriptome, Research Paper
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Zdroj: Genome Biol
Genome Biology, Vol 26, Iss 1, Pp 1-21 (2025)
Shi, M, Méar, L, Karlsson, M, Álvez, M B, Digre, A, Schutten, R, Katona, B, Vuu, J, Lindström, E, Hikmet, F, Jin, H, Yuan, M, Li, X, Yang, H, Song, X, Sjöstedt, E, Edfors, F, Oksvold, P, von Feilitzen, K, Zwahlen, M, Forsberg, M, Johansson, F, Mulder, J, Hökfelt, T, Luo, Y, Butler, L, Zhong, W, Mardinoglu, A, Sivertsson, Å, Ponten, F, Fagerberg, L, Lindskog, C, Uhlén, M & Zhang, C 2025, 'A resource for whole-body gene expression map of human tissues based on integration of single cell and bulk transcriptomics', Genome Biology, vol. 26, 152. https://doi.org/10.1186/s13059-025-03616-4
Shi, M, Méar, L, Karlsson, M, Álvez, M B, Digre, A, Schutten, R, Katona, B, Vuu, J, Lindström, E, Hikmet, F, Jin, H, Yuan, M, Li, X, Yang, H, Song, X, Sjöstedt, E, Edfors, F, Oksvold, P, von Feilitzen, K, Zwahlen, M, Forsberg, M, Johansson, F, Mulder, J, Hökfelt, T, Luo, Y, Butler, L, Zhong, W, Mardinoglu, A, Sivertsson, Å, Ponten, F, Fagerberg, L, Lindskog, C, Uhlén, M & Zhang, C 2025, 'A resource for whole-body gene expression map of human tissues based on integration of single cell and bulk transcriptomics', Genome Biology, vol. 26, no. 1, 152, pp. 152. https://doi.org/10.1186/s13059-025-03616-4Témata: Single-cell, QH301-705.5, Cell- och molekylärbiologi, Single-Cell Analysis/methods, Bioinformatics and Computational Biology, QH426-470, Gene expression mapping, Medicinsk genetik och genomik, Medical Genetics and Genomics, Human Protein Atlas, Database, Bioinformatik och beräkningsbiologi, Organ Specificity, Medicinsk bioteknologi (Inriktn. mot cellbiologi (inkl. stamcellsbiologi), molekylärbiologi, mikrobiologi, biokemi eller biofarmaci), Genetics, Humans, Medical Biotechnology (Focus on Cell Biology, (incl. Stem Cell Biology), Molecular Biology, Microbiology, Biochemistry or Biopharmacy), Gene Expression Profiling/methods, Biology (General), Transcriptome, Cell and Molecular Biology, Cell type classification
Popis souboru: application/pdf
Přístupová URL adresa: https://doaj.org/article/2797400ecc594732981eaabec3a91d79
https://kclpure.kcl.ac.uk/ws/files/348108749/s13059-025-03616-4.pdf
http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-561490
https://pure.au.dk/portal/en/publications/a795bd4b-f524-40c5-bf34-bc0c21055090
https://doi.org/10.1186/s13059-025-03616-4
http://www.scopus.com/inward/record.url?scp=105007441526&partnerID=8YFLogxK -
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Zdroj: Nat Commun
Nature Communications, Vol 16, Iss 1, Pp 1-18 (2025)
Nature communications, vol. 16, no. 1, pp. 4400Témata: Paraffin Embedding, Lung Neoplasms, Humans, Gene Expression Profiling/methods, Neoplasms/genetics, Transcriptome, Female, Breast Neoplasms/genetics, Lung Neoplasms/genetics, Science, Gene Expression Profiling, Neoplasms, Breast Neoplasms, Article
Popis souboru: application/pdf
Přístupová URL adresa: https://pubmed.ncbi.nlm.nih.gov/40355415
https://doaj.org/article/e63c8c51df484be4b26b236ff5fc5c30
https://serval.unil.ch/notice/serval:BIB_3C48B807E321
https://serval.unil.ch/resource/serval:BIB_3C48B807E321.P001/REF.pdf
http://nbn-resolving.org/urn/resolver.pl?urn=urn:nbn:ch:serval-BIB_3C48B807E3217 -
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Zdroj: Lung
Témata: Male, Hypercholesterolemia/genetics, Bronchi/metabolism, Brief Report, Gene Expression Profiling, Hypercholesterolemia, Osteoporosis/genetics, Bronchi, Comorbidity, Respiratory Mucosa, Middle Aged, Pulmonary Disease, Pulmonary Disease, Chronic Obstructive, Respiratory Mucosa/metabolism, Chronic Obstructive/genetics, Humans, Osteoporosis, Female, Gene Expression Profiling/methods, Transcriptome, Aged, Genome-Wide Association Study
Přístupová URL adresa: https://pubmed.ncbi.nlm.nih.gov/40287517
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Zdroj: Breast Cancer Res Treat
Témata: Adult, Aged, 80 and over, 0301 basic medicine, Gene Expression Profiling, Clinical Decision-Making, Breast Neoplasms, Middle Aged, Prognosis, Clinical Trial, Risk Assessment, Clinical Decision-Making [MeSH], Aged, 80 and over [MeSH], Aged [MeSH], Breast cancer, Neoplasm Recurrence, Local/pathology [MeSH], Breast Neoplasms/therapy [MeSH], Neoplasm Staging [MeSH], 21-gene assay, Adjuvant treatment, Neoplasm Recurrence, Local/genetics [MeSH], Ki-67 Antigen/metabolism [MeSH], Chemotherapy, Adjuvant/methods [MeSH], Biomarkers, Tumor [MeSH], Risk Assessment/methods [MeSH], Registry, Breast Neoplasms/pathology [MeSH], Female [MeSH], Recurrence Score, Adult [MeSH], Humans [MeSH], Prospective Studies [MeSH], Breast Neoplasms/genetics [MeSH], Breast Neoplasms/drug therapy [MeSH], Breast Neoplasms/metabolism [MeSH], Middle Aged [MeSH], Prognosis [MeSH], Gene Expression Profiling/methods [MeSH], Ki-67, Registries [MeSH], 03 medical and health sciences, Ki-67 Antigen, 0302 clinical medicine, Chemotherapy, Adjuvant, Biomarkers, Tumor, Humans, Female, Prospective Studies, Registries, Neoplasm Recurrence, Local, Aged, Neoplasm Staging
Přístupová URL adresa: https://pubmed.ncbi.nlm.nih.gov/38874685
https://repository.publisso.de/resource/frl:6518260 -
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Zdroj: Gut
Gut, vol. 73, no. 7, pp. 1076-1086Témata: Male, Adult, Adolescent, Biopsy, Gene Expression Profiling, Eosinophilic Esophagitis, Middle Aged, 3. Good health, Oesophagus, Young Adult, Esophagus, Eosinophilic Esophagitis/genetics, Eosinophilic Esophagitis/pathology, Eosinophilic Esophagitis/diagnosis, Humans, Female, Transcriptome, Esophagus/pathology, Gene Expression Profiling/methods, Case-Control Studies, oesophageal disease, oesophageal disorders, oesophagitis
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Zdroj: Acta Neuropathol Commun
Acta Neuropathologica Communications, Vol 13, Iss 1, Pp 1-12 (2025)Témata: Male, Adult, Adolescent, Oncogene Proteins, Fusion, BGN, Research, Gene Expression Profiling, Transcription Factor RelA, Aged [MeSH], Ependymoma/genetics [MeSH], Supratentorial Neoplasms/pathology [MeSH], Transcription Factor RelA/metabolism [MeSH], Expression, Prognosis, Male [MeSH], Supratentorial Neoplasms/metabolism [MeSH], Supratentorial Neoplasms/genetics [MeSH], Risk Assessment/methods [MeSH], Child [MeSH], Ependymoma/metabolism [MeSH], Adolescent [MeSH], Female [MeSH], Adult [MeSH], Humans [MeSH], Oncogene Proteins, Fusion/genetics [MeSH], Middle Aged [MeSH], Ependymoma/pathology [MeSH], Prognosis [MeSH], Young Adult [MeSH], Gene Expression Profiling/methods [MeSH], Ependymoma, Transcription Factor RelA/genetics [MeSH], Oncogene Proteins, Fusion/metabolism [MeSH], Child, Preschool [MeSH], Supratentorial Neoplasms, Middle Aged, Risk Assessment, Young Adult, Child, Preschool, Humans, ZFTA-RELA fusion, Female, Neurology. Diseases of the nervous system, RC346-429, Child, Aged
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Zdroj: Clin Exp Immunol
Clinical and experimental immunology, vol. 219, no. 1Témata: Inflammation, Male, Gene Expression Profiling, data comparison, Inflammation/Inflammatory Disease, Reproducibility of Results, Reference Standards, Arthritis, Juvenile, interferon inflammation, standardized method, interferon signature, patient classification, Interferon Type I, Humans, Female, Child, Interferon Type I/genetics, Interferon Type I/immunology, Gene Expression Profiling/standards, Gene Expression Profiling/methods, Arthritis, Juvenile/genetics, Arthritis, Juvenile/immunology, Arthritis, Juvenile/diagnosis, Inflammation/genetics, Inflammation/immunology, Inflammation/diagnosis
Popis souboru: ELETTRONICO; application/pdf
Přístupová URL adresa: https://pubmed.ncbi.nlm.nih.gov/40127048
https://hdl.handle.net/11368/3113696
https://academic.oup.com/cei/article/219/1/uxaf018/8092481?login=true#512966726
http://nbn-resolving.org/urn/resolver.pl?urn=urn:nbn:ch:serval-BIB_DCA561BAD5227
https://serval.unil.ch/resource/serval:BIB_DCA561BAD522.P001/REF.pdf
https://serval.unil.ch/notice/serval:BIB_DCA561BAD522 -
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Zdroj: Nat Commun
Nature Communications, Vol 15, Iss 1, Pp 1-22 (2024)Témata: Adult, 0301 basic medicine, Tertiary Lymphoid Structures -- genetics -- pathology -- immunology, Tumor Microenvironment/genetics, Science, Tertiary Lymphoid Structures/pathology, Oncologie, Triple Negative Breast Neoplasms/pathology, Triple Negative Breast Neoplasms, Sciences de la santé humaine, Article, Physics and Astronomy (all), 03 medical and health sciences, Gene Expression Profiling -- methods, Tumor Microenvironment, Biomarkers, Tumor, Tumor Microenvironment/immunology, Humans, Cluster Analysis, Human health sciences, Tertiary Lymphoid Structures/genetics, Aged, Triple Negative Breast Neoplasms -- genetics -- pathology -- therapy, Neoplastic, 0303 health sciences, Biochemistry, Genetics and Molecular Biology (all), Tumor -- genetics -- metabolism, Gene Expression Profiling, Tumor Microenvironment -- genetics -- immunology, Chemistry (all), Sciences bio-médicales et agricoles, Middle Aged, Tertiary Lymphoid Structures/immunology, Gene Expression Regulation, Neoplastic, Tertiary Lymphoid Structures, Gene Expression Regulation, Oncology, Biomarkers, Tumor/metabolism, Triple Negative Breast Neoplasms/therapy, Female, Immunotherapy, Gene Expression Profiling/methods, Biomarkers, Tumor/genetics, Triple Negative Breast Neoplasms/genetics, Transcriptome, Biomarkers
Popis souboru: 1 full-text file(s): application/pdf
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SC2Spa:a deep learning based approach to map transcriptome to spatial origins at cellular resolution
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Zdroj: Liao , L , Madan , E , Palma , A M , Kim , H , Kumar , A , Bhoopathi , P , Winn , R , Trevino , J , Fisher , P , Brakebusch , C H , Kim , G , Kim , J , Gogna , R & Won , K J 2025 , ' SC2Spa : a deep learning based approach to map transcriptome to spatial origins at cellular resolution ' , BMC Bioinformatics , vol. 26 , no. 1 , 148 . https://doi.org/10.1186/s12859-025-06173-6
Témata: Deep Learning, Single-Cell Analysis/methods, Transcriptome, Gene Expression Profiling/methods, Sequence Analysis, RNA/methods, Animals, Humans, RNA-Seq
Popis souboru: application/pdf
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Zdroj: PLoS One
Popis souboru: application/pdf
Relation: https://doi.org/10.1371/journal.pone.0318151; Liu, M., Zheng, S., Li, H., Budowle, B., Wang, L., Lou, Z., & Ge, J. (2025). High resolution tissue and cell type identification via single cell transcriptomic profiling. PloS one, 20(3), e0318151. https://doi.org/10.1371/journal.pone.0318151; https://hdl.handle.net/20.500.12503/33050; 20
Dostupnost: https://hdl.handle.net/20.500.12503/33050
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Témata: Adult, Aged, Biomarkers - blood, Case-Control Studies, Female, Gene Expression Profiling - methods, Humans, Male, Middle Aged, Motor Neuron Disease - blood, Motor Neuron Disease - diagnosis, Motor Neuron Disease - genetics, RNA - blood, RNA - genetics, Transcriptome - genetics
Popis souboru: pdf
Relation: ispartof: Experimental biology and medicine (Maywood, N.J.) vol 249; WOS:001400989400001; 991005732476207891; https://researchportal.murdoch.edu.au/view/delivery/61MUN_INST/12172178300007891/13172178290007891; alma:61MUN_INST/bibs/991005732476207891
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Zdroj: Stokholm, M N, Rabaglino, M B & Kadarmideen, H N 2024, ' GEDI: An R Package for Integration of Transcriptomic Data from Multiple Platforms for Bioinformatics Applications ', Current Protocols, vol. 4, e70046 . https://doi.org/10.1002/cpz1.70046
Stokholm, M N, Rabaglino, M B & Kadarmideen, H N 2024, 'GEDI: An R Package for Integration of Transcriptomic Data from Multiple Platforms for Bioinformatics Applications', Current protocols, vol. 4, no. 10, e70046. https://doi.org/10.1002/cpz1.70046Témata: Data integration problem, Bioinformatics, Gene Expression Profiling, Computational Biology, High-Throughput Nucleotide Sequencing, Computational Biology/methods, Batch correction, Animals, Data integration, Cattle, Gene Expression Profiling/methods, Transcriptomics, Transcriptome, Software
Popis souboru: application/pdf
Přístupová URL adresa: https://pubmed.ncbi.nlm.nih.gov/39453042
https://orbit.dtu.dk/en/publications/b91640a0-3bd1-4b73-97ef-06365522de6f
https://pure.au.dk/portal/en/publications/39c3dbb9-e88e-48b5-b89e-1adbd2f9b91a
https://pure.au.dk/portal/en/publications/39c3dbb9-e88e-48b5-b89e-1adbd2f9b91a
https://doi.org/10.1002/cpz1.70046
https://pure.au.dk/ws/files/427455090/Current_Protocols_-_2024_-_Stokholm_-_GEDI_An_R_Package_for_Integration_of_Transcriptomic_Data_from_Multiple_Platforms_for.pdf -
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Zdroj: Lung
Témata: Male, Brief Report, Gene Expression Profiling, Middle Aged, Risk Assessment, Idiopathic Pulmonary Fibrosis, Risk Factors, Disease Progression, Humans, Pulmonary Diffusing Capacity, Female, Registries, Antifibrotic Agents, Female [MeSH], Idiopathic Pulmonary Fibrosis/drug therapy [MeSH], Disease Progression [MeSH], Lung Transplantation [MeSH], Idiopathic Pulmonary Fibrosis/mortality [MeSH], Aged [MeSH], Humans [MeSH], Antifibrotic Agents/therapeutic use [MeSH], Gene expression profiling, Middle Aged [MeSH], Risk Factors [MeSH], Prognosis, Pulmonary Diffusing Capacity [MeSH], Idiopathic Pulmonary Fibrosis/genetics [MeSH], Male [MeSH], Gene Expression Profiling/methods [MeSH], Risk Assessment/methods [MeSH], Interstitial lung diseases, Idiopathic Pulmonary Fibrosis/diagnosis [MeSH], Observational study, Registries [MeSH], Aged, Lung Transplantation
Přístupová URL adresa: https://pubmed.ncbi.nlm.nih.gov/39242435
https://repository.publisso.de/resource/frl:6494804
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