Výsledky vyhľadávania - "Epigenomics"

The rise of historical epigenomics and temporal analysis of gene regulation.

Autori: Holleley CE Hahn EE

Zdroj: Genome biology [Genome Biol] 2025 Oct 01; Vol. 26 (1), pp. 326. Date of Electronic Publication: 2025 Oct 01.

Spôsob vydávania: Journal Article; Review

Informácie o časopise: Publisher: BioMed Central Ltd Country of Publication: England NLM ID: 100960660 Publication Model: Electronic Cited Medium: Internet ISSN: 1474-760X (Electronic) Linking ISSN: 14747596 NLM ISO Abbreviation: Genome Biol Subsets: MEDLINE

Výrazy zo slovníka MeSH: Epigenesis, Genetic* , Epigenomics*/history , Epigenomics*/methods , Gene Expression Regulation*, Animals ; Humans ; Gene-Environment Interaction

Phased epigenomics and methylation inheritance in a historical Vitis vinifera hybrid.

Autori: Cochetel N Vondras AM Figueroa-Balderas R a ďalší

Zdroj: Genome biology [Genome Biol] 2025 Nov 17; Vol. 26 (1), pp. 392. Date of Electronic Publication: 2025 Nov 17.

Spôsob vydávania: Journal Article

Informácie o časopise: Publisher: BioMed Central Ltd Country of Publication: England NLM ID: 100960660 Publication Model: Electronic Cited Medium: Internet ISSN: 1474-760X (Electronic) Linking ISSN: 14747596 NLM ISO Abbreviation: Genome Biol Subsets: MEDLINE

Výrazy zo slovníka MeSH: Vitis*/genetics , DNA Methylation* , Epigenomics*/methods , Epigenesis, Genetic*, Genome, Plant ; Hybridization, Genetic

Genomics and Epigenomics Approaches for the Quantification of Circulating Tumor DNA in Liquid Biopsy: Relevance of a Multimodal Strategy.

Autori: De Paolis E Perrucci A Albertini Petroni G a ďalší

Zdroj: International journal of molecular sciences [Int J Mol Sci] 2025 Nov 13; Vol. 26 (22). Date of Electronic Publication: 2025 Nov 13.

Spôsob vydávania: Journal Article; Review

Informácie o časopise: Publisher: MDPI Country of Publication: Switzerland NLM ID: 101092791 Publication Model: Electronic Cited Medium: Internet ISSN: 1422-0067 (Electronic) Linking ISSN: 14220067 NLM ISO Abbreviation: Int J Mol Sci Subsets: MEDLINE

Výrazy zo slovníka MeSH: Circulating Tumor DNA*/genetics , Circulating Tumor DNA*/blood , Genomics*/methods , Epigenomics*/methods , Biomarkers, Tumor*/genetics , Biomarkers, Tumor*/blood , Neoplasms*/genetics , Neoplasms*/blood , Neoplasms*/diagnosis, Humans ; Liquid Biopsy/methods ; Epigenesis, Genetic

ESAE-SDA: ensemble sparse autoencoder framework for epigenomics-informed snoRNA-disease associations prediction.

Autori: Jiang X Chen X Xu L a ďalší

Zdroj: BMC bioinformatics [BMC Bioinformatics] 2025 Oct 31; Vol. 26 (1), pp. 270. Date of Electronic Publication: 2025 Oct 31.

Spôsob vydávania: Journal Article

Informácie o časopise: Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105 (Electronic) Linking ISSN: 14712105 NLM ISO Abbreviation: BMC Bioinformatics Subsets: MEDLINE

Výrazy zo slovníka MeSH: RNA, Small Nucleolar*/genetics , Epigenomics*/methods, Humans ; Artificial Intelligence ; Epigenesis, Genetic ; Computational Biology/methods ; Genetic Predisposition to Disease ; Autoencoder

Methylation reference datasets from quartet DNA materials for benchmarking epigenome sequencing.

Autori: Guo X Chen Q Zhang Y a ďalší

Zdroj: Nature communications [Nat Commun] 2025 Oct 16; Vol. 16 (1), pp. 9202. Date of Electronic Publication: 2025 Oct 16.

Spôsob vydávania: Journal Article

Informácie o časopise: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

Výrazy zo slovníka MeSH: DNA Methylation*/genetics , Epigenome*/genetics , Epigenomics*/methods , Epigenomics*/standards , Sequence Analysis, DNA*/methods , Sequence Analysis, DNA*/standards , DNA*/genetics, Humans ; Benchmarking ; Reproducibility of Results ; CpG Islands/genetics ; High-Throughput Nucleotide Sequencing/methods ; Reference Standards

[Combining epigenetics and immunotherapy: an innovative strategy for acute myeloid leukemia treatment].

Transliterovaný název: Combiner épigénétique et immunothérapie - Une stratégie innovante pour le traitement de la leucémie myéloïde aiguë.

Autori: Ballan N Bordji M Degoul M a ďalší

Zdroj: Medecine sciences : M/S [Med Sci (Paris)] 2025 Oct; Vol. 41 (10), pp. 798-801. Date of Electronic Publication: 2025 Nov 19.

Spôsob vydávania: Journal Article; Review

Informácie o časopise: Publisher: EDK Country of Publication: France NLM ID: 8710980 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1958-5381 (Electronic) Linking ISSN: 07670974 NLM ISO Abbreviation: Med Sci (Paris) Subsets: MEDLINE

Výrazy zo slovníka MeSH: Immunotherapy*/methods , Immunotherapy*/trends , Leukemia, Myeloid, Acute*/therapy , Leukemia, Myeloid, Acute*/genetics , Leukemia, Myeloid, Acute*/immunology , Epigenesis, Genetic* , Epigenomics*/methods , Epigenomics*/trends , Therapies, Investigational*/methods , Therapies, Investigational*/trends, Humans ; Combined Modality Therapy/methods

SLUR(M)-py: a SLURM powered Pythonic pipeline for parallel processing of 3D (Epi)genomic profiles.

Autori: Roth C Venu V Bacot S a ďalší

Zdroj: Epigenomics [Epigenomics] 2025 Dec; Vol. 17 (17), pp. 1233-1247. Date of Electronic Publication: 2025 Oct 03.

Spôsob vydávania: Journal Article

Informácie o časopise: Publisher: Taylor & Francis Country of Publication: England NLM ID: 101519720 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1750-192X (Electronic) Linking ISSN: 1750192X NLM ISO Abbreviation: Epigenomics Subsets: MEDLINE

Výrazy zo slovníka MeSH: Epigenomics*/methods , Software* , Epigenesis, Genetic* , Computational Biology*/methods , Genomics*/methods, Humans ; Chromatin/genetics

Towards molecular evolutionary epigenomics with an expanded nucleotide code involving methylated bases.

Autori: Yoshida S Uchiyama I Fukuyo M a ďalší

Zdroj: DNA research : an international journal for rapid publication of reports on genes and genomes [DNA Res] 2025 Dec 01; Vol. 32 (6).

Spôsob vydávania: Journal Article

Informácie o časopise: Publisher: Oxford University Press Country of Publication: England NLM ID: 9423827 Publication Model: Print Cited Medium: Internet ISSN: 1756-1663 (Electronic) Linking ISSN: 13402838 NLM ISO Abbreviation: DNA Res Subsets: MEDLINE

Výrazy zo slovníka MeSH: DNA Methylation* , Evolution, Molecular* , Epigenomics*/methods , Epigenesis, Genetic*, Helicobacter pylori/genetics

Using epigenetic clocks in environmental epigenetics: recommendations for estimating biological aging in perinatal and pediatric samples.

Autori: England-Mason G; Department of Pediatrics, Cumming School of Medicine, University of Calgary, Calgary, Alberta, Canada.; Owerko Centre, Alberta Children's Hospital Research Institute, University of Calgary, Calgary, Alberta, Canada.

Zdroj: Essays in biochemistry [Essays Biochem] 2025 Nov 26; Vol. 69 (3), pp. 249-264.

Spôsob vydávania: Journal Article; Review

Informácie o časopise: Publisher: Portland Press on behalf of the Biochemical Society Country of Publication: England NLM ID: 0043306 Publication Model: Print Cited Medium: Internet ISSN: 1744-1358 (Electronic) Linking ISSN: 00711365 NLM ISO Abbreviation: Essays Biochem Subsets: MEDLINE

Výrazy zo slovníka MeSH: Epigenesis, Genetic* , Aging*/genetics , Environmental Exposure*/adverse effects , Epigenomics*/methods, Humans ; Child ; DNA Methylation ; Biomarkers ; Female ; Pregnancy

Integrative Epigenomic and Targeted Protein Analysis in MRONJ: Correlating DNA Methylation with Bone Biomarkers.

Autori: Alshammari RA Tantawy M Wang D a ďalší

Zdroj: International journal of molecular sciences [Int J Mol Sci] 2025 Nov 20; Vol. 26 (22). Date of Electronic Publication: 2025 Nov 20.

Spôsob vydávania: Journal Article

Informácie o časopise: Publisher: MDPI Country of Publication: Switzerland NLM ID: 101092791 Publication Model: Electronic Cited Medium: Internet ISSN: 1422-0067 (Electronic) Linking ISSN: 14220067 NLM ISO Abbreviation: Int J Mol Sci Subsets: MEDLINE

Výrazy zo slovníka MeSH: DNA Methylation* , Epigenomics*/methods , Bisphosphonate-Associated Osteonecrosis of the Jaw*/genetics , Bisphosphonate-Associated Osteonecrosis of the Jaw*/metabolism, Humans ; Female ; Male ; Biomarkers/metabolism ; Biomarkers/blood ; Aged ; Middle Aged ; Case-Control Studies ; Epigenesis, Genetic ; Denosumab/adverse effects ; Diphosphonates/adverse effects ; Genome-Wide Association Study ; Promoter Regions, Genetic ; Bone and Bones/metabolism ; Osteocalcin/blood ; Bone Density Conservation Agents/adverse effects

PoreMeth2 for decoding the evolution of methylome alterations with nanopore sequencing.

Autori: Mattei G Baragli M Gega B a ďalší

Zdroj: Genome research [Genome Res] 2025 Nov 03; Vol. 35 (11), pp. 2501-2512. Date of Electronic Publication: 2025 Nov 03.

Spôsob vydávania: Journal Article

Informácie o časopise: Publisher: Cold Spring Harbor Laboratory Press Country of Publication: United States NLM ID: 9518021 Publication Model: Electronic Cited Medium: Internet ISSN: 1549-5469 (Electronic) Linking ISSN: 10889051 NLM ISO Abbreviation: Genome Res Subsets: MEDLINE

Výrazy zo slovníka MeSH: DNA Methylation* , Nanopore Sequencing*/methods , Epigenome* , Software* , Epigenomics*/methods, Humans ; CpG Islands ; Epigenesis, Genetic ; High-Throughput Nucleotide Sequencing

scDIFF: automatic cell type annotation using scATAC-seq data by incorporating bulk-level genomic and epigenomic information in a deep diffusive transformer.

Autori: Wang HY Dong H Du PF

Zdroj: Briefings in bioinformatics [Brief Bioinform] 2025 Nov 01; Vol. 26 (6).

Spôsob vydávania: Journal Article

Informácie o časopise: Publisher: Oxford University Press Country of Publication: England NLM ID: 100912837 Publication Model: Print Cited Medium: Internet ISSN: 1477-4054 (Electronic) Linking ISSN: 14675463 NLM ISO Abbreviation: Brief Bioinform Subsets: MEDLINE

Výrazy zo slovníka MeSH: Epigenomics*/methods , Software* , Genomics*/methods , Single-Cell Analysis*/methods , Molecular Sequence Annotation* , Chromatin*/genetics, Humans ; Transposases/metabolism ; High-Throughput Nucleotide Sequencing ; Sequence Analysis, DNA

Characterization of cis-regulatory elements and functional variants in colorectal cancer using epigenomics and CRISPRi screenings.

Autori: Lu Z Chen C Zhang H a ďalší

Zdroj: Nature cancer [Nat Cancer] 2025 Nov; Vol. 6 (11), pp. 1777-1799. Date of Electronic Publication: 2025 Aug 25.

Spôsob vydávania: Journal Article

Informácie o časopise: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101761119 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2662-1347 (Electronic) Linking ISSN: 26621347 NLM ISO Abbreviation: Nat Cancer Subsets: MEDLINE

Výrazy zo slovníka MeSH: Colorectal Neoplasms*/genetics , Colorectal Neoplasms*/pathology , Epigenomics*/methods , Regulatory Sequences, Nucleic Acid*/genetics, Humans ; Epigenesis, Genetic ; Gene Expression Regulation, Neoplastic ; Transcription Factor 7-Like 2 Protein/genetics ; Repressor Proteins/genetics ; CRISPR-Cas Systems ; Polymorphism, Single Nucleotide ; Cell Proliferation/genetics ; Cell Line, Tumor ; Genetic Predisposition to Disease

Optimized CUT&Tag enables robust epigenome profiling in Schizosaccharomyces pombe.

Autori: Huang CZ Zhou KD Ma W

Zdroj: Methods (San Diego, Calif.) [Methods] 2025 Nov; Vol. 243, pp. 49-53. Date of Electronic Publication: 2025 Aug 22.

Spôsob vydávania: Journal Article

Informácie o časopise: Publisher: Academic Press Country of Publication: United States NLM ID: 9426302 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1095-9130 (Electronic) Linking ISSN: 10462023 NLM ISO Abbreviation: Methods Subsets: MEDLINE

Výrazy zo slovníka MeSH: Schizosaccharomyces*/genetics , Schizosaccharomyces*/metabolism , Epigenome*/genetics , Epigenomics*/methods, Histones/genetics ; Histones/metabolism ; Heterochromatin/genetics ; Epigenesis, Genetic

Contributions of epigenomic and epitranscriptomic methylation to animal colouration.

Autori: Strowbridge N Vieites DR Ritchie MG a ďalší

Zdroj: Trends in genetics : TIG [Trends Genet] 2025 Nov; Vol. 41 (11), pp. 1005-1016. Date of Electronic Publication: 2025 May 28.

Spôsob vydávania: Journal Article; Review

Informácie o časopise: Publisher: Elsevier Trends Journals Country of Publication: England NLM ID: 8507085 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 0168-9525 (Print) Linking ISSN: 01689525 NLM ISO Abbreviation: Trends Genet Subsets: MEDLINE

Výrazy zo slovníka MeSH: DNA Methylation*/genetics , Epigenesis, Genetic* , Epigenomics* , Transcriptome* , Pigmentation*/genetics, Animals

Exploring Epigenetics in Secondary Education. Representations From a Chemical Perspective.

Autori: Rubilar CM Solís-Pinilla J Blancafort AM a ďalší

Zdroj: Biochemistry and molecular biology education : a bimonthly publication of the International Union of Biochemistry and Molecular Biology [Biochem Mol Biol Educ] 2025 Nov-Dec; Vol. 53 (6), pp. 626-640. Date of Electronic Publication: 2025 Oct 08.

Spôsob vydávania: Journal Article

Informácie o časopise: Publisher: John Wiley & sons Country of Publication: United States NLM ID: 100970605 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1539-3429 (Electronic) Linking ISSN: 14708175 NLM ISO Abbreviation: Biochem Mol Biol Educ Subsets: MEDLINE

Výrazy zo slovníka MeSH: Students* , Epigenesis, Genetic* , Epigenomics*/education, Humans ; Female ; Male ; Learning

EpiAgent: foundation model for single-cell epigenomics.

Autori: Chen X Li K Cui X a ďalší

Zdroj: Nature methods [Nat Methods] 2025 Nov; Vol. 22 (11), pp. 2316-2327. Date of Electronic Publication: 2025 Sep 25.

Spôsob vydávania: Journal Article

Informácie o časopise: Publisher: Nature Pub. Group Country of Publication: United States NLM ID: 101215604 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1548-7105 (Electronic) Linking ISSN: 15487091 NLM ISO Abbreviation: Nat Methods Subsets: MEDLINE

Výrazy zo slovníka MeSH: Single-Cell Analysis*/methods , Epigenomics*/methods, Humans ; Chromatin/genetics ; Chromatin/metabolism ; Computational Biology/methods ; Epigenesis, Genetic ; Software

3-D biomechanics and epigenomics reveal atypical fibroblast responses in cardiometabolic disease.

Autori: Ibrahim SY Holdiness R Thadisena A a ďalší

Zdroj: American journal of physiology. Heart and circulatory physiology [Am J Physiol Heart Circ Physiol] 2025 Nov 01; Vol. 329 (5), pp. H1267-H1277. Date of Electronic Publication: 2025 Oct 10.

Spôsob vydávania: Journal Article

Informácie o časopise: Publisher: American Physiological Society Country of Publication: United States NLM ID: 100901228 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1522-1539 (Electronic) Linking ISSN: 03636135 NLM ISO Abbreviation: Am J Physiol Heart Circ Physiol Subsets: MEDLINE

Výrazy zo slovníka MeSH: Fibroblasts*/metabolism , Fibroblasts*/pathology , Epigenomics* , Epigenesis, Genetic* , Cell Culture Techniques, Three Dimensional* , Myocardium*/metabolism , Myocardium*/pathology, Humans ; Female ; Male ; Cells, Cultured ; Bioprinting ; Biomechanical Phenomena ; Diet, High-Fat ; Extracellular Matrix/metabolism

PathwayVote: an R package for robust pathway enrichment analysis for DNA methylation data using a consensus-based voting framework.

Autori: Zheng Y Gao F Hou L

Zdroj: Bioinformatics (Oxford, England) [Bioinformatics] 2025 Nov 01; Vol. 41 (11).

Spôsob vydávania: Journal Article

Informácie o časopise: Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium: Internet ISSN: 1367-4811 (Electronic) Linking ISSN: 13674803 NLM ISO Abbreviation: Bioinformatics Subsets: MEDLINE

Výrazy zo slovníka MeSH: DNA Methylation* , Software* , Epigenomics*/methods, CpG Islands ; Humans ; Quantitative Trait Loci ; Voting

Beyond the genome: intergenerational inheritance through epigenetics and other pathways.

Autori: Non AL Rabay CJ Rejzek LC

Zdroj: Epigenomics [Epigenomics] 2025 Nov; Vol. 17 (16), pp. 1137-1140. Date of Electronic Publication: 2025 Oct 01.

Spôsob vydávania: Congress; Journal Article

Informácie o časopise: Publisher: Taylor & Francis Country of Publication: England NLM ID: 101519720 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1750-192X (Electronic) Linking ISSN: 1750192X NLM ISO Abbreviation: Epigenomics Subsets: MEDLINE

Výrazy zo slovníka MeSH: Epigenesis, Genetic* , Epigenomics*/methods , Inheritance Patterns*, Humans ; Animals