Výsledky vyhledávání - "DATA curation"

Verification and reproducible curation of the BioModels repository.

Autoři: Smith LP Malik-Sheriff RS Nguyen TVN a další

Zdroj: PLoS computational biology [PLoS Comput Biol] 2025 Dec 04; Vol. 21 (12), pp. e1013239. Date of Electronic Publication: 2025 Dec 04 (Print Publication: 2025).

Způsob vydávání: Journal Article

Informace o časopise: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet ISSN: 1553-7358 (Electronic) Linking ISSN: 1553734X NLM ISO Abbreviation: PLoS Comput Biol Subsets: MEDLINE

Výrazy ze slovníku MeSH: Programming Languages* , Systems Biology*/methods , Data Curation*/methods , Databases, Factual* , Models, Biological*, Reproducibility of Results ; Computer Simulation ; Computational Biology/methods ; Humans

Disambiguating sentiment annotation: A mixed methods investigation of annotator experience and impact of instructions on annotator agreement.

Autoři: Äyräväinen LEM Hinds J Davidson BI

Zdroj: PloS one [PLoS One] 2025 Dec 01; Vol. 20 (12), pp. e0336269. Date of Electronic Publication: 2025 Dec 01 (Print Publication: 2025).

Způsob vydávání: Journal Article

Informace o časopise: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE

Výrazy ze slovníku MeSH: Natural Language Processing* , Data Curation*/methods, Humans ; Male ; Female

Beyond protocol standardization: The importance of data curation and software transparency.

Autoři: Welzel J Jacobsen N Cockx H a další

Zdroj: Journal of Parkinson's disease [J Parkinsons Dis] 2025 Dec; Vol. 15 (8), pp. 1544-1547. Date of Electronic Publication: 2025 Sep 18.

Způsob vydávání: Journal Article; Letter

Informace o časopise: Publisher: SAGE Publications Country of Publication: United States NLM ID: 101567362 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1877-718X (Electronic) Linking ISSN: 18777171 NLM ISO Abbreviation: J Parkinsons Dis Subsets: MEDLINE

Výrazy ze slovníku MeSH: Software*/standards , Parkinson Disease*/physiopathology , Parkinson Disease*/complications , Parkinson Disease*/diagnosis , Data Curation*/standards , Gait Disorders, Neurologic*/etiology , Gait Disorders, Neurologic*/diagnosis, Humans

Large Language Model Versus Manual Review for Clinical Data Curation in Breast Cancer: Retrospective Comparative Study.

Autoři: Kang YJ Lee H Yi JP a další

Zdroj: JMIR medical informatics [JMIR Med Inform] 2025 Nov 06; Vol. 13, pp. e73605. Date of Electronic Publication: 2025 Nov 06.

Způsob vydávání: Journal Article; Comparative Study

Informace o časopise: Publisher: JMIR Publications Country of Publication: Canada NLM ID: 101645109 Publication Model: Electronic Cited Medium: Internet ISSN: 2291-9694 (Electronic) Linking ISSN: 22919694 NLM ISO Abbreviation: JMIR Med Inform Subsets: MEDLINE

Výrazy ze slovníku MeSH: Breast Neoplasms* , Electronic Health Records* , Data Curation*/methods, Humans ; Retrospective Studies ; Female ; Natural Language Processing ; Large Language Models

Data Extraction and Curation from Radiology Reports for Pancreatic Cyst Surveillance Using Large Language Models.

Autoři: Choubey AP Eguia E Hollingsworth A a další

Korporace: Choubey AP Eguia E Hollingsworth A a další

Zdroj: Journal of the American College of Surgeons [J Am Coll Surg] 2025 Nov 01; Vol. 241 (5), pp. 766-772. Date of Electronic Publication: 2025 Oct 15.

Způsob vydávání: Journal Article

Informace o časopise: Publisher: Lippincott Williams & Wilkins, Inc Country of Publication: United States NLM ID: 9431305 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1879-1190 (Electronic) Linking ISSN: 10727515 NLM ISO Abbreviation: J Am Coll Surg Subsets: MEDLINE

Výrazy ze slovníku MeSH: Pancreatic Cyst*/diagnostic imaging , Data Curation*/methods, Humans ; Retrospective Studies ; Male ; Female ; Middle Aged ; Aged ; Feasibility Studies ; Registries ; Large Language Models

Rethinking large-scale phylogenomics with EukPhylo v.1.0, a flexible toolkit to enable phylogeny-informed data curation and analyses of diverse eukaryotic lineages.

Autoři: Katz LA Leleu M Ani G a další

Zdroj: MBio [mBio] 2025 Oct 08; Vol. 16 (10), pp. e0177025. Date of Electronic Publication: 2025 Aug 27.

Způsob vydávání: Journal Article

Informace o časopise: Publisher: American Society for Microbiology Country of Publication: United States NLM ID: 101519231 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2150-7511 (Electronic) NLM ISO Abbreviation: mBio Subsets: MEDLINE

Výrazy ze slovníku MeSH: Phylogeny* , Genomics*/methods , Eukaryota*/genetics , Eukaryota*/classification , Data Curation*/methods , Software* , Computational Biology*/methods

PERC: a suite of software tools for the curation of cryoEM data with application to simulation, modeling and machine learning.

Autoři: Costa-Gomes B Greer J Juraschko N a další

Zdroj: Acta crystallographica. Section F, Structural biology communications [Acta Crystallogr F Struct Biol Commun] 2025 Oct 01; Vol. 81 (Pt 10), pp. 441-450. Date of Electronic Publication: 2025 Sep 09.

Způsob vydávání: Journal Article

Informace o časopise: Publisher: John Wiley & Sons Inc Country of Publication: United States NLM ID: 101620319 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2053-230X (Electronic) Linking ISSN: 2053230X NLM ISO Abbreviation: Acta Crystallogr F Struct Biol Commun Subsets: MEDLINE

Výrazy ze slovníku MeSH: Cryoelectron Microscopy*/methods , Machine Learning* , Software* , Data Curation*/methods, Algorithms ; Models, Molecular

Prompt-guided consistency learning for multi-label classification with incomplete labels.

Autoři: Wang S Wan Q Zhang Z a další

Zdroj: Neural networks : the official journal of the International Neural Network Society [Neural Netw] 2025 Oct; Vol. 190, pp. 107604. Date of Electronic Publication: 2025 May 26.

Způsob vydávání: Journal Article

Informace o časopise: Publisher: Pergamon Press Country of Publication: United States NLM ID: 8805018 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1879-2782 (Electronic) Linking ISSN: 08936080 NLM ISO Abbreviation: Neural Netw Subsets: MEDLINE

Výrazy ze slovníku MeSH: Data Curation* , Neural Networks, Computer*, Datasets as Topic ; Machine Learning ; Graph Neural Networks ; Recurrent Neural Networks ; Classification Algorithms ; Semantics

A human-LLM collaborative annotation approach for screening articles on precision oncology randomized controlled trials.

Autoři: Chen H Zhao J Zheng S a další

Zdroj: BMC medical research methodology [BMC Med Res Methodol] 2025 Sep 29; Vol. 25 (1), pp. 219. Date of Electronic Publication: 2025 Sep 29.

Způsob vydávání: Journal Article

Informace o časopise: Publisher: BioMed Central Country of Publication: England NLM ID: 100968545 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2288 (Electronic) Linking ISSN: 14712288 NLM ISO Abbreviation: BMC Med Res Methodol Subsets: MEDLINE

Výrazy ze slovníku MeSH: Randomized Controlled Trials as Topic* , Precision Medicine*/methods , Medical Oncology*/methods , Neoplasms*/therapy , Data Curation*/methods , Supervised Machine Learning*, Humans ; Reproducibility of Results

A realistic phantom dataset for benchmarking cryo-ET data annotation.

Autoři: Peck A Yu Y Schwartz J a další

Zdroj: Nature methods [Nat Methods] 2025 Sep; Vol. 22 (9), pp. 1819-1823. Date of Electronic Publication: 2025 Aug 26.

Způsob vydávání: Journal Article

Informace o časopise: Publisher: Nature Pub. Group Country of Publication: United States NLM ID: 101215604 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1548-7105 (Electronic) Linking ISSN: 15487091 NLM ISO Abbreviation: Nat Methods Subsets: MEDLINE

Výrazy ze slovníku MeSH: Cryoelectron Microscopy*/methods , Electron Microscope Tomography*/methods , Electron Microscope Tomography*/instrumentation , Phantoms, Imaging* , Data Curation*/methods, Benchmarking ; Machine Learning ; Algorithms

LR-COBRAS: A logic reasoning-driven interactive medical image data annotation algorithm.

Autoři: Zhou N Cao J

Zdroj: Computerized medical imaging and graphics : the official journal of the Computerized Medical Imaging Society [Comput Med Imaging Graph] 2025 Sep; Vol. 124, pp. 102623. Date of Electronic Publication: 2025 Aug 11.

Způsob vydávání: Journal Article

Informace o časopise: Publisher: Elsevier Science Country of Publication: United States NLM ID: 8806104 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1879-0771 (Electronic) Linking ISSN: 08956111 NLM ISO Abbreviation: Comput Med Imaging Graph Subsets: MEDLINE

Výrazy ze slovníku MeSH: Algorithms* , Data Curation*/methods , Image Processing, Computer-Assisted*/methods, Humans ; Deep Learning

Hierarchical Event Descriptor library schema for EEG data annotation.

Autoři: Hermes D Pal Attia T Beniczky S a další

Zdroj: Scientific data [Sci Data] 2025 Aug 19; Vol. 12 (1), pp. 1448. Date of Electronic Publication: 2025 Aug 19.

Způsob vydávání: Journal Article; Dataset

Informace o časopise: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101640192 Publication Model: Electronic Cited Medium: Internet ISSN: 2052-4463 (Electronic) Linking ISSN: 20524463 NLM ISO Abbreviation: Sci Data Subsets: MEDLINE

Výrazy ze slovníku MeSH: Electroencephalography* , Data Curation*, Humans ; Brain/physiology

Automating Precision Oncology Literature Curation: A Decision Tree Approach Using Large Language Models.

Autoři: Lin FP Tran M Thavaneswaran S a další

Zdroj: Studies in health technology and informatics [Stud Health Technol Inform] 2025 Aug 07; Vol. 329, pp. 248-252.

Způsob vydávání: Journal Article

Informace o časopise: Publisher: IOS Press Country of Publication: Netherlands NLM ID: 9214582 Publication Model: Print Cited Medium: Internet ISSN: 1879-8365 (Electronic) Linking ISSN: 09269630 NLM ISO Abbreviation: Stud Health Technol Inform Subsets: MEDLINE

Výrazy ze slovníku MeSH: Precision Medicine*/methods , Decision Trees* , Medical Oncology*/methods , Natural Language Processing* , Data Mining*/methods , Data Curation*/methods , Neoplasms*, Humans ; Knowledge Bases ; Large Language Models

Machine Learning Based Semi-Automatic Iterative Annotation Method of Similar Laboratory Test Item Combination Between Multiple Facilities.

Autoři: Kume N Kato S

Zdroj: Studies in health technology and informatics [Stud Health Technol Inform] 2025 Aug 07; Vol. 329, pp. 490-494.

Způsob vydávání: Journal Article

Informace o časopise: Publisher: IOS Press Country of Publication: Netherlands NLM ID: 9214582 Publication Model: Print Cited Medium: Internet ISSN: 1879-8365 (Electronic) Linking ISSN: 09269630 NLM ISO Abbreviation: Stud Health Technol Inform Subsets: MEDLINE

Výrazy ze slovníku MeSH: Machine Learning* , Electronic Health Records* , Data Curation*/methods, Humans

Rapid Annotation Strategy for in Vivo Phase II Metabolites of Anabolic-Androgenic Steroids Using Liquid Chromatography-Ion Mobility-Mass Spectrometry.

Autoři: Koomen DC Leaptrot KL May JC a další

Zdroj: Journal of the American Society for Mass Spectrometry [J Am Soc Mass Spectrom] 2025 Aug 06; Vol. 36 (8), pp. 1762-1770. Date of Electronic Publication: 2025 Jul 23.

Způsob vydávání: Journal Article

Informace o časopise: Publisher: ACS Publications Country of Publication: United States NLM ID: 9010412 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1879-1123 (Electronic) Linking ISSN: 10440305 NLM ISO Abbreviation: J Am Soc Mass Spectrom Subsets: MEDLINE

Výrazy ze slovníku MeSH: Data Curation*/methods , Metabolic Detoxication, Phase II* , Anabolic Androgenic Steroids*/urine , Oxymetholone*/urine , Methyltestosterone*/urine, Ion Mobility Spectrometry ; Liquid Chromatography-Mass Spectrometry ; Doping in Sports/prevention & control ; Humans ; Male ; Proof of Concept Study

Multimodal data curation via interoperability: use cases with the Medical Imaging and Data Resource Center.

Autoři: Chen W Whitney HM Kahaki S a další

Zdroj: Scientific data [Sci Data] 2025 Aug 01; Vol. 12 (1), pp. 1340. Date of Electronic Publication: 2025 Aug 01.

Způsob vydávání: Journal Article; Dataset

Informace o časopise: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101640192 Publication Model: Electronic Cited Medium: Internet ISSN: 2052-4463 (Electronic) Linking ISSN: 20524463 NLM ISO Abbreviation: Sci Data Subsets: MEDLINE

Výrazy ze slovníku MeSH: Data Curation* , Diagnostic Imaging* , Health Information Interoperability*, Humans

Annotating neurophysiologic data at scale with optimized human input.

Autoři: Xu Z Scheid BH Conrad EC a další

Zdroj: Journal of neural engineering [J Neural Eng] 2025 Jul 03; Vol. 22 (4). Date of Electronic Publication: 2025 Jul 03.

Způsob vydávání: Journal Article

Informace o časopise: Publisher: Institute of Physics Pub Country of Publication: England NLM ID: 101217933 Publication Model: Electronic Cited Medium: Internet ISSN: 1741-2552 (Electronic) Linking ISSN: 17412552 NLM ISO Abbreviation: J Neural Eng Subsets: MEDLINE

Výrazy ze slovníku MeSH: Electrocorticography*/methods , Deep Learning* , Electroencephalography*/methods , Data Curation*/methods, Humans ; Animals ; Dogs ; Epilepsy/physiopathology ; Epilepsy/diagnosis ; Supervised Machine Learning ; Algorithms

Scaling Public Health Text Annotation: Zero-Shot Learning vs. Crowdsourcing for Improved Efficiency and Labeling Accuracy.

Autoři: Kazari K Chen Y Shakeri Z

Zdroj: Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference [Annu Int Conf IEEE Eng Med Biol Soc] 2025 Jul; Vol. 2025, pp. 1-4.

Způsob vydávání: Journal Article

Informace o časopise: Publisher: [IEEE] Country of Publication: United States NLM ID: 101763872 Publication Model: Print Cited Medium: Internet ISSN: 2694-0604 (Electronic) Linking ISSN: 23757477 NLM ISO Abbreviation: Annu Int Conf IEEE Eng Med Biol Soc Subsets: MEDLINE

Výrazy ze slovníku MeSH: Crowdsourcing*/methods , Public Health* , Social Media* , Data Curation*/methods , Machine Learning*, Humans

The Evolution of Radiology Image Annotation in the Era of Large Language Models.

Autoři: Flanders AE Wang X Wu CC a další

Zdroj: Radiology. Artificial intelligence [Radiol Artif Intell] 2025 Jul; Vol. 7 (4), pp. e240631.

Způsob vydávání: Journal Article; Review; Research Support, N.I.H., Extramural

Informace o časopise: Publisher: Radiological Society of North America, Inc Country of Publication: United States NLM ID: 101746556 Publication Model: Print Cited Medium: Internet ISSN: 2638-6100 (Electronic) Linking ISSN: 26386100 NLM ISO Abbreviation: Radiol Artif Intell Subsets: MEDLINE

Výrazy ze slovníku MeSH: Natural Language Processing* , Radiology* , Artificial Intelligence* , Radiology Information Systems* , Data Curation*/methods, Humans ; Large Language Models

Preserving noise texture through training data curation for deep learning denoising of high-resolution cardiac EID-CT.

Autoři: Treb K Chang S Koons E a další

Zdroj: Medical physics [Med Phys] 2025 Jul; Vol. 52 (7), pp. e17938.

Způsob vydávání: Journal Article

Informace o časopise: Publisher: John Wiley and Sons, Inc Country of Publication: United States NLM ID: 0425746 Publication Model: Print Cited Medium: Internet ISSN: 2473-4209 (Electronic) Linking ISSN: 00942405 NLM ISO Abbreviation: Med Phys Subsets: MEDLINE

Výrazy ze slovníku MeSH: Deep Learning* , Signal-To-Noise Ratio* , Image Processing, Computer-Assisted*/methods , Tomography, X-Ray Computed* , Data Curation* , Heart*/diagnostic imaging, Humans ; Phantoms, Imaging