Výsledky vyhľadávania - "Bacteria genetics"

Seed-borne bacteria drive wheat rhizosphere microbiome assembly via niche partitioning and facilitation

Autori: Daniel Garrido-Sanz Christoph Keel

Zdroj: Nat Microbiol
Nature microbiology, vol. 10, no. 5, pp. 1130-1144

Predmety: Bacteria, Microbiota, RNA, Ribosomal, 16S, Rhizosphere, Seeds, Metagenomics, Triticum/microbiology, Soil Microbiology, Microbiota/genetics, Seeds/microbiology, Bacteria/genetics, Bacteria/classification, Bacteria/metabolism, Bacteria/isolation & purification, RNA, Ribosomal, 16S/genetics, Plant Roots/microbiology, Plant Roots, Article, Triticum

Popis súboru: application/pdf

Prístupová URL adresa: https://pubmed.ncbi.nlm.nih.gov/40140705
http://nbn-resolving.org/urn/resolver.pl?urn=urn:nbn:ch:serval-BIB_3E77C388B6CF8
https://serval.unil.ch/notice/serval:BIB_3E77C388B6CF
https://serval.unil.ch/resource/serval:BIB_3E77C388B6CF.P001/REF.pdf

Freezing of Vaginal Swabs Prior to DNA Purification Does Not Statistically Significantly Affect Microbiome Composition

Autori: Khaled Saoud Ali Ghathian Julie Elm Heintz Sarah Mollerup a ďalší

Zdroj: Ghathian, K S A, Heintz, J E, Mollerup, S, Paulsen, S J, Krogfelt, K A, Frimodt-Møller, N, Hansen, K H, Halkjær, S I, Holm, A, Pinholt, M & Petersen, A M 2025, ' Freezing of Vaginal Swabs Prior to DNA Purification Does Not Statistically Significantly Affect Microbiome Composition ', MicrobiologyOpen, vol. 14, no. 5, e70053 . https://doi.org/10.1002/mbo3.70053

Predmety: RNA, Ribosomal, 16S/genetics, Specimen Handling/methods, Freezing, Humans, Microbiota/genetics, Female, Bacteria/genetics, DNA, Bacterial/isolation & purification, Vagina/microbiology

Popis súboru: application/pdf

Prístupová URL adresa: https://curis.ku.dk/ws/files/482329939/MicrobiologyOpen_-_2025_-_Ghathian_-_Freezing_of_Vaginal_Swabs_Prior_to_DNA_Purification_Does_Not_Statistically.pdf

Combining mucosal microbiome and host multi-omics data shows prognostic potential in paediatric ulcerative colitis

Autori: Maria Kulecka Jill O’Sullivan Rachel Fitzgerald a ďalší

Zdroj: Nature Communications

Predmety: Epigenomics, Male, Adolescent, Knockout, Gastrointestinal Microbiome/genetics, Bacteria/genetics, Colitis, Multiomics, Prognosis, Ulcerative/microbiology, Mice, Recurrence, Intestinal Mucosa/microbiology, Animals, Humans, Female, Child, Preschool, Transcriptome, Interferon-gamma/metabolism, Interleukin-10/genetics

Seed tuber microbiome can predict growth potential of potato varieties

Autori: Yang Song Elisa Atza Juan J. Sánchez-Gil a ďalší

Zdroj: Nature Microbiology. 10:28-40

Predmety: Seeds/microbiology, Solanum tuberosum/microbiology, Acinetobacter/genetics, Microbiota/genetics, Plant Tubers/microbiology, Bacteria/genetics

Prístupová URL adresa: https://pubmed.ncbi.nlm.nih.gov/39730984
https://research-portal.uu.nl/en/publications/896be777-4559-4514-add7-601664504f29
https://doi.org/10.1038/s41564-024-01872-x

Small intestinal microbiota: from taxonomic composition to metabolism

Autori: Simon Yersin Pascale Vonaesch

Zdroj: Trends in microbiology, vol. 32, no. 10, pp. 970-983

Predmety: Humans, Gastrointestinal Microbiome, Bacteria/classification, Bacteria/genetics, Bacteria/metabolism, Intestine, Small/microbiology, Animals, duodenum, ileum, jejunum, nutrient absorption, small intestinal bacterial overgrowth, small intestinal microbiota, Bacteria, Intestine, Small

Popis súboru: application/pdf

Prístupová URL adresa: https://pubmed.ncbi.nlm.nih.gov/38503579
https://serval.unil.ch/notice/serval:BIB_1EAF55E4ABF5
https://serval.unil.ch/resource/serval:BIB_1EAF55E4ABF5.P001/REF.pdf
http://nbn-resolving.org/urn/resolver.pl?urn=urn:nbn:ch:serval-BIB_1EAF55E4ABF51

The effect of sample type and location on industrial workplace sink and hand dryer microbiomes

Autori: Thompson, T. P. Rice, C. J. Athanasakis, E. a ďalší

Zdroj: BMC Microbiol
BMC Microbiology, Vol 25, Iss 1, Pp 1-10 (2025)
Thompson, T P, Rice, C J, Athanasakis, E, Mawhinney, J, Gilmore, B F, Fitzgerald, P, Skvortsov, T & Kelly, S A 2025, 'The effect of sample type and location on industrial workplace sink and hand dryer microbiomes', BMC Microbiology, vol. 25, 325. https://doi.org/10.1186/s12866-025-04054-9

Predmety: metagenomics, Hand dryer, Sink, Research, anti-bacterial agents/pharmacology, microbiota/genetics, Antimicrobial resistance, Microbiology, QR1-502, drug resistance, bacterial, hand disinfection, hand/microbiology, workplace, bacteria/genetics, Microbiome, humans, Environmental surveillance, Workplace

Popis súboru: application/pdf

Prístupová URL adresa: https://doaj.org/article/6366b2cf5f9945a6a85526eab3e0d326
https://pure.qub.ac.uk/en/publications/a9edb7bc-fb8c-4875-a27e-a2cc6d849138

Nasopharyngeal microbiota is influenced by agricultural air pollution in individuals with and without COPD

Autori: Odendaal, Mari-Lee Taenzer, Julia de Rooij, Myrna MT a ďalší

Prispievatelia: Odendaal, Mari-Lee Taenzer, Julia de Rooij, Myrna MT a ďalší

Zdroj: Sci Rep
Scientific Reports, Vol 15, Iss 1, Pp 1-12 (2025)

Predmety: Male, Science, Nasopharynx/microbiology, Netherlands/epidemiology, Bacteria/genetics, 16S rRNA amplicon sequencing, Article, Pulmonary Disease, Nasopharyngeal microbiota, Pulmonary Disease, Chronic Obstructive, Ammonia, Nasopharynx, Air Pollution, COPD, Humans, Animals, Ammonia exposure, Chronic Obstructive/microbiology, Aged, Netherlands, Bacteria, Microbiota, Agriculture, Environmental Exposure, Air Pollution/adverse effects, Livestock-related air pollution, Middle Aged, Anaerobic bacteria, Medicine, Female, Ammonia/analysis, Environmental Exposure/adverse effects

Prístupová URL adresa: https://pubmed.ncbi.nlm.nih.gov/40325057
https://doaj.org/article/b2ebcc28894345f29fa2a0fde473290d
https://rivm.openrepository.com/handle/10029/655322

Lung and gut microbiota profiling in intensive care unit patients: a prospective pilot study

Autori: Kritikos, A. Bernasconi, E. Choi, Y. a ďalší

Zdroj: BMC Infect Dis
BMC Infectious Diseases, Vol 25, Iss 1, Pp 1-15 (2025)
BMC infectious diseases, vol. 25, no. 1, pp. 468

Predmety: Male, Adult, Critical Illness, Pilot Projects, Gut microbiota, Infectious and parasitic diseases, RC109-216, Ventilation acquired pneumonia, RNA, Ribosomal, 16S, Gut-lung axis, Humans, Intensive care unit, Prospective Studies, Lung, Aged, Bacteria, Research, Pneumonia, Ventilator-Associated, Middle Aged, Respiration, Artificial, Gastrointestinal Microbiome, Intensive Care Units, Female, Lung/microbiology, Pneumonia, Ventilator-Associated/microbiology, RNA, Ribosomal, 16S/genetics, Bacteria/classification, Bacteria/genetics, Bacteria/isolation & purification, Antibiotic, Dysbiosis, Lung microbiota

Popis súboru: application/pdf

Prístupová URL adresa: https://pubmed.ncbi.nlm.nih.gov/40188054
https://doaj.org/article/94e9a113681b4d51a6b507c870b8fa88
https://serval.unil.ch/resource/serval:BIB_0A14A17A2DE7.P001/REF.pdf
https://serval.unil.ch/notice/serval:BIB_0A14A17A2DE7
http://nbn-resolving.org/urn/resolver.pl?urn=urn:nbn:ch:serval-BIB_0A14A17A2DE72

Metagenomic next-generation sequencing as a diagnostic tool in the clinical routine of an infectious diseases department: a retrospective cohort study

Autori: Kalbitz, Sven Ermisch, Jörg Kellner, Nils a ďalší

Zdroj: Infection

Predmety: Male, Adult, Aged, 80 and over, 0301 basic medicine, Adolescent [MeSH], Female [MeSH], High-Throughput Nucleotide Sequencing/methods [MeSH], mNGS, HIV infection, Aged, 80 and over [MeSH], Immunodeficiency, Aged [MeSH], Adult [MeSH], Humans [MeSH], Infectious diseases, Retrospective Studies [MeSH], Middle Aged [MeSH], Bacteria/genetics [MeSH], Diagnostics, Communicable Diseases/virology [MeSH], Cohort Studies [MeSH], Brief Report, Male [MeSH], Bacteria/classification [MeSH], Young Adult [MeSH], Metagenomics/methods [MeSH], Bacteria/isolation, Communicable Diseases/diagnosis [MeSH], 0303 health sciences, Bacteria, Adolescent, High-Throughput Nucleotide Sequencing, Middle Aged, Communicable Diseases, Cohort Studies, Young Adult, 03 medical and health sciences, Humans, Female, Metagenomics, Retrospective Studies, Aged

Prístupová URL adresa: https://pubmed.ncbi.nlm.nih.gov/38777941
https://repository.publisso.de/resource/frl:6520359

Comparison of culture‐dependent and ‐independent bacterial detection results on nasal swabs in dogs with nasal discharge

Autori: Vangrinsven, Emilie Duprez, J N Meex, Cécile a ďalší

Prispievatelia: Vangrinsven, Emilie Duprez, J N Meex, Cécile a ďalší

Zdroj: Journal of Small Animal Practice. 65:376-386

Predmety: Male, DNA, Bacterial, Polymerase Chain Reaction/veterinary, Dog Diseases/microbiology, RNA, Ribosomal, 16S/analysis, Bacteria/genetics, Polymerase Chain Reaction, 0403 veterinary science, Veterinary medicine & animal health, 03 medical and health sciences, Dogs, 0302 clinical medicine, RNA, Ribosomal, 16S, Nose Diseases, Animals, DNA, Bacterial/analysis, Dog Diseases, Small Animals, Dog Diseases/diagnosis, RNA, Ribosomal, 16S/genetics, Bacteria, Bacteria/isolation & purification, 04 agricultural and veterinary sciences, Life sciences, Médecine vétérinaire & santé animale, 3. Good health, Nose Diseases/veterinary, Nose Diseases/diagnosis, Nose Diseases/microbiology, Sciences du vivant, Female, Bacteria/classification

Prístupová URL adresa: https://pubmed.ncbi.nlm.nih.gov/38594828

Rusa deer microbiota: the importance of preliminary data analysis for meaningful diversity comparisons

Autori: Subrata, Sena A Yuda, Pramana Artama, Wayan T a ďalší

Prispievatelia: Subrata, Sena A Yuda, Pramana Artama, Wayan T a ďalší

Zdroj: International Microbiology

Predmety: DNA, Bacterial, Data Analysis, Microbiology (medical), Feces/microbiology, flore microbienne, Conservation, Bacteria/genetics, animal sauvage, Microbiology, fèces, Zoologie, RNA, Ribosomal, 16S, Sequencing, Animals, Phylogeny, Chromolaena odorata, Mammals, interactions biologiques, RNA, Ribosomal, 16S/genetics, Azadirachta indica, Microbiota, espèce en danger, Bacteria/isolation & purification, Sequence Analysis, DNA, Biodiversity, Life sciences, Gastrointestinal Microbiome, Indonésie, [SDV] Life Sciences [q-bio], DNA, Bacterial/genetics, Sciences du vivant, Microbiome, Zoology, Java, Deer/microbiology, Bacteria/classification

Popis súboru: text

Prístupová URL adresa: https://pubmed.ncbi.nlm.nih.gov/38589705
https://hdl.handle.net/2268/327995
https://doi.org/10.1007/s10123-024-00521-x
http://agritrop.cirad.fr/612070/
https://hal.science/hal-05182813v1
https://doi.org/10.1007/s10123-024-00521-x

Molecular Detection of Esp and Ace Genes in Enterococcus faecalis Isolated from Endodontic Infections

Autori: M. Dhahir, Abdulwahed Bassim, Dr. Ashwak

Predmety: Root Canal Irrigants, Molecular biology, FOS: Biological sciences, Bacteria/genetics, Microbiology, Enterococcus, Endodontics

The bacterial community associated with the solitary resin bee Megachile tosticauda throughout its life cycle

Autori: Elisabeth Williamson Kelly Hill Katja Hogendoorn a ďalší

Zdroj: FEMS Microbiol Ecol
Williamson, E, Hill, K, Hogendoorn, K & Eisenhofer, R 2025, ' The bacterial community associated with the solitary resin bee Megachile tosticauda throughout its life cycle ', FEMS Microbiology Ecology, vol. 101, no. 4, fiaf023 . https://doi.org/10.1093/femsec/fiaf023

Predmety: Larva/microbiology, Life Cycle Stages, DNA, Bacterial/genetics, RNA, Ribosomal, 16S/genetics, Microbiota, Bees/microbiology, Pollen/microbiology, Animals, Bacteria/genetics, Symbiosis, Research Article

Popis súboru: application/pdf

Prístupová URL adresa: https://pubmed.ncbi.nlm.nih.gov/40037901
https://curis.ku.dk/ws/files/437819726/fiaf023.pdf

Longitudinal Changes in Fecal Microbiota During Hospitalization in Horses With Different Types of Colic

Autori: Loublier, Clémence Costa, Marcio Taminiau, Bernard a ďalší

Prispievatelia: Loublier, Clémence Costa, Marcio Taminiau, Bernard a ďalší

Zdroj: J Vet Intern Med
Journal of Veterinary Internal Medicine, Vol 39, Iss 2, Pp n/a-n/a (2025)

Predmety: Male, Feces/microbiology, Colic, colitis, Veterinary medicine, microbiome, Colic/microbiology, Bacteria/genetics, Veterinary medicine & animal health, Feces, Horse Diseases/microbiology, laparotomy, SF600-1100, Animals, Horses, Prospective Studies, intestine, equine, amplicon sequencing, colon, Bacteria, STANDARD ARTICLE, Bacteria/isolation & purification, obstruction, Life sciences, Médecine vétérinaire & santé animale, Colic/veterinary, Gastrointestinal Microbiome, Hospitalization, strangulated, Sciences du vivant, Veterinary (all), Horse Diseases, Female, Bacteria/classification, gastrointestinal disease

Prístupová URL adresa: https://pubmed.ncbi.nlm.nih.gov/40048584
https://doaj.org/article/022654ff21b24dfd8389fdfa4264ee1a
https://hdl.handle.net/2268/331478
https://doi.org/10.1111/jvim.70039

Disentangling the feedback loops driving spatial patterning in microbial communities

Autori: Alyssa Henderson Alessia Del Panta Olga T. Schubert a ďalší

Zdroj: NPJ Biofilms Microbiomes
npj Biofilms and Microbiomes, Vol 11, Iss 1, Pp 1-14 (2025)
NPJ biofilms and microbiomes, vol. 11, no. 1, pp. 32
npj Biofilms and Microbiomes, 11 (1)

Predmety: Microbial ecology, Feedback, Physiological, Bacteria, Biofilms/growth & development, Microbiota, Bacteria/genetics, Bacteria/classification, Biofilms, QR100-130, Review

Popis súboru: application/pdf; application/application/pdf

Prístupová URL adresa: https://pubmed.ncbi.nlm.nih.gov/39979272
https://doaj.org/article/babaa12b5ce34058bff939ca03e82190
https://serval.unil.ch/notice/serval:BIB_95FE9E9C7E7F
https://serval.unil.ch/resource/serval:BIB_95FE9E9C7E7F.P001/REF.pdf
http://nbn-resolving.org/urn/resolver.pl?urn=urn:nbn:ch:serval-BIB_95FE9E9C7E7F0
http://hdl.handle.net/20.500.11850/724967

Phylogenetic clustering of microbial communities as a biomarker for chemical pollution

Autori: Thomas P. Smith Rachel Hope Thomas Bell

Zdroj: FEMS Microbiol Ecol
FEMS microbiology ecology, vol. 101, no. 5

Predmety: Bacteria, Microbiota, RNA, Ribosomal, 16S, Humans, Phylogeny, Bacteria/genetics, Bacteria/drug effects, Bacteria/classification, Bacteria/growth & development, Bacteria/isolation & purification, Environmental Monitoring/methods, Microbiota/drug effects, Biomarkers/analysis, Water Pollutants, Chemical/toxicity, RNA, Ribosomal, 16S/genetics, bioindicators, composition, ecotoxicology, microbial communities, phylogenetics, pollutants, Biomarkers, Water Pollutants, Chemical, Research Article, Environmental Monitoring

Popis súboru: application/pdf

Prístupová URL adresa: https://pubmed.ncbi.nlm.nih.gov/40317081
http://nbn-resolving.org/urn/resolver.pl?urn=urn:nbn:ch:serval-BIB_23B0C5EFE1BD4
https://serval.unil.ch/notice/serval:BIB_23B0C5EFE1BD
https://serval.unil.ch/resource/serval:BIB_23B0C5EFE1BD.P001/REF.pdf

Unraveling the distinctive gut microbiome of khulans (Equus hemionus hemionus) in comparison to their drinking water and closely related equids

Autori: Jarquín-Díaz, Víctor Hugo Dayaram, Anisha Soilemetzidou, Eirini S a ďalší

Zdroj: Sci Rep
Scientific Reports, Vol 15, Iss 1, Pp 1-14 (2025)
Scientific Reports

Predmety: Landwirtschaft und verwandte Bereiche, Bacteria Genetics, Science, microbiome, Article, Drinking Water Microbiology, Horses Microbiology, Bacteria Isolation & Purification, RNA, Ribosomal, 16S, Animals, Horses, 16S rRNA full length gene sequencing, Phylogeny, PacBio, Gobi Desert, Bacteria, RNA, Ribosomal, 16S Genetics, Drinking Water, Biodiversity, Equidae, Freshwater microbiota, freshwater microbiota, Gastrointestinal Microbiome, Cardiovascular and Metabolic Diseases, Integrative Biomedicine [Topic 3], Medicine, Microbiome, Equus hemionus hemionus, Bacteria Classification, Equidae Microbiology, VDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480

Popis súboru: application/pdf

Prístupová URL adresa: https://pubmed.ncbi.nlm.nih.gov/39843625
https://doaj.org/article/d500aff355894ee79c526f1b8ccd917e
https://edoc.mdc-berlin.de/id/eprint/25052/1/25052oa.pdf
https://hdl.handle.net/11250/3214230
https://phaidra.vetmeduni.ac.at/o:3898
https://doi.org/10.1038/s41598-025-87216-z

Multiomics Analyses With Stool-Type Stratification in Patient Cohorts and Blautia Identification as a Potential Bacterial Modulator in Type 2 Diabetes Mellitus

Autori: Guo, Qian Gao, Zezheng Zhao, Linhua a ďalší

Prispievatelia: Guo, Qian Gao, Zezheng Zhao, Linhua a ďalší

Zdroj: Diabetes
DIABETES

Predmety: Feces/microbiology, mice, ALBUMINURIA, Bacteria/genetics, DISEASE, Endocrinology & Metabolism, Mice, Feces, Humans, Animals, 11 Medical and Health Sciences, 2. Zero hunger, Science & Technology, Bacteria, MORTALITY, MICROALBUMINURIA, Biology and Life Sciences, ASSOCIATION, 32 Biomedical and clinical sciences, Multiomics, Diabetes Mellitus, Type 2/metabolism, 3. Good health, Cross-Sectional Studies, Diabetes Mellitus, Type 2, Genetics/Genomes/Proeomics/Metabolomics, Life Sciences & Biomedicine

Popis súboru: application/pdf

Prístupová URL adresa: https://pubmed.ncbi.nlm.nih.gov/38079576
https://biblio.vub.ac.be/vubir/multiomics-analyses-with-stooltype-stratification-in-patient-cohorts-and-blautia-identification-as-a-potential-bacterial-modulator-in-type-2-diabetes-mellitus(66aed5d8-fd51-4e4e-9b1f-9aaa7302ef9f).html
https://biblio.ugent.be/publication/01HYG53GXXF2EPR6BFXS0K4ZTK/file/01HYG5SZGRJ7WKBKWQAFXHTHQR
https://biblio.ugent.be/publication/01HYG53GXXF2EPR6BFXS0K4ZTK
http://doi.org/10.2337/db23-0447
http://hdl.handle.net/1854/LU-01HYG53GXXF2EPR6BFXS0K4ZTK

Taxonomic distribution of SbmA/BacA and BacA-like antimicrobial peptide transporters suggests independent recruitment and convergent evolution in host–microbe interactions

Autori: Smith, Nicholas, T Boukherissa, Amira Antaya, Kiera a ďalší

Prispievatelia: Smith, Nicholas, T Boukherissa, Amira Antaya, Kiera a ďalší

Zdroj: ISSN: 2057-5858.

Predmety: antimicrobial peptides, host-microbe interaction, molecular evolution, pathogenesis, peptide transport, rhizobium-legume symbioses, MESH: Antimicrobial Peptides* / genetics, MESH: Antimicrobial Peptides* / metabolism, MESH: Host Microbial Interactions* / genetics, MESH: Membrane Transport Proteins* / classification, MESH: Membrane Transport Proteins* / genetics, MESH: Membrane Transport Proteins* / metabolism, MESH: Phylogeny, MESH: Symbiosis, MESH: Antimicrobial Peptides* / pharmacology, MESH: Bacteria* / classification, MESH: Bacteria* / genetics, MESH: Bacteria* / metabolism, MESH: Bacterial Proteins* / genetics, MESH: Bacterial Proteins* / metabolism, MESH: Evolution, Molecular, MESH: Fabaceae / microbiology, [SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology, [SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Genomics [q-bio.GN], [SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM], [SDV.BV.BOT]Life Sciences [q-bio]/Vegetal Biology/Botanics, [SDV.EE.IEO]Life Sciences [q-bio]/Ecology, environment/Symbiosis

Relation: info:eu-repo/semantics/altIdentifier/pmid/40238647; PUBMED: 40238647; WOS: 001491468200001

Dostupnosť: https://hal.science/hal-05085516
https://hal.science/hal-05085516v1/document
https://hal.science/hal-05085516v1/file/smith2025%20BacA.pdf
https://doi.org/10.1099/mgen.0.001380

Seeding and feeding: nutrition and birth-associated exposures shape gut microbiome assembly in breastfed infants

Autori: Stinson, Lisa F Norrish, Isabella Mhembere, Faith a ďalší

Predmety: Bacteria - classification, Bacteria - genetics, Bacteria - isolation & purification, Bifidobacterium - genetics, Bifidobacterium - isolation & purification, Breast Feeding, Cesarean Section, Child, Preschool, Feces - microbiology, Female, Gastrointestinal Microbiome, Humans, Infant, Newborn, Longitudinal Studies, Male, Milk, Human - microbiology, RNA, Ribosomal, 16S - genetics

Popis súboru: pdf

Relation: ispartof: Gut microbes issue 1 vol 17; 991005814049507891; https://researchportal.murdoch.edu.au/view/delivery/61MUN_INST/12183604130007891/13183604120007891; alma:61MUN_INST/bibs/991005814049507891

Dostupnosť: https://doi.org/10.1080/19490976.2025.2557981
https://researchportal.murdoch.edu.au/esploro/outputs/journalArticle/Seeding-and-feeding-nutrition-and-birth-associated/991005814049507891
https://researchportal.murdoch.edu.au/view/delivery/61MUN_INST/12183604130007891/13183604120007891