Výsledky vyhledávání - "Alignment-free algorithm"

Alignment-free detection and seed-based identification of multi-loci V(D)J recombinations in Vidjil-algo

Autoři: Borée, Cyprien Giraud, Mathieu Salson, Mikaël

Přispěvatelé: Borée, Cyprien Giraud, Mathieu Salson, Mikaël

Zdroj: Peer Community Journal, Vol 5, Iss, Pp-(2025)

Témata: Spaced seeds, Immune repertoire, Alignment-free algorithm, [SDV.IMM] Life Sciences [q-bio]/Immunology, Spaced seeds, Aho-Corasick Automaton, Alignment-free algorithm, Immune repertoire, VDJ recombinations, Adaptive immune receptor repertoire, Science, Aho-Corasick Automaton, Archaeology, Adaptive immune receptor repertoire, [INFO.INFO-CC] Computer Science [cs]/Computational Complexity [cs.CC], VDJ recombinations, CC1-960, [INFO.INFO-BI] Computer Science [cs]/Bioinformatics [q-bio.QM]

Popis souboru: application/pdf

Přístupová URL adresa: https://doaj.org/article/7d1c2781708d4737b664cc23bfc22905
https://hal.science/hal-04361907v4/document
https://hal.science/hal-04361907v4
https://doi.org/10.24072/pcjournal.547

Alignment-free detection and seed-based identification of multi-loci V(D)J recombinations in Vidjil-algo

Autoři: Borée, Cyprien Giraud, Mathieu Salson, Mikaël a další

Přispěvatelé: Borée, Cyprien Giraud, Mathieu Salson, Mikaël a další

Zdroj: https://hal.science/hal-04361907 ; 2023.

Témata: Spaced seeds, Aho-Corasick Automaton, Alignment-free algorithm, Immune repertoire, VDJ recombinations, Adaptive immune receptor repertoire, [INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM]

Relation: hal-04361907; https://hal.science/hal-04361907; https://hal.science/hal-04361907/document; https://hal.science/hal-04361907/file/vidjil-algo.pdf

Dostupnost: https://hal.science/hal-04361907
https://hal.science/hal-04361907/document
https://hal.science/hal-04361907/file/vidjil-algo.pdf

Abstract Electronic commerce (EC) is an Internet-based technology that has gained wide acceptance by business operators and its usage has drastically increased over the years due to the transformation enabled by information technology. Despite the progres

Autoři: manager, journal

Zdroj: University of Ibadan Journal of Science and Logics in ICT Research; Vol. 5 No. 1 (2020): UIJSLICTR Vol. 5 No. 1 June 2020

Témata: Self-Organizing map, Protein sequences, Alignment-free algorithm, Amino acid content ratio, Amino acid position ratio

Popis souboru: application/pdf

Relation: https://journals.ui.edu.ng/index.php/uijslictr/article/view/88/70; https://journals.ui.edu.ng/index.php/uijslictr/article/view/88

Dostupnost: https://journals.ui.edu.ng/index.php/uijslictr/article/view/88

Use of an Alignment-Free Method for the Geographical Discrimination of GTPVs Based on the GPCR Sequences

Autoři: Chibssa, Tesfaye, Rufael Liu, Yang Sombo, Melaku a další

Přispěvatelé: Chibssa, Tesfaye, Rufael Liu, Yang Sombo, Melaku a další

Zdroj: ISSN: 2076-2607 ; Microorganisms ; https://hal.inrae.fr/hal-03306901 ; Microorganisms, 2021, 9 (4), pp.855. ⟨10.3390/microorganisms9040855⟩.

Témata: GTPV, alignment-free algorithm, k-mer, G-protein-coupled chemokine receptor, [SDV]Life Sciences [q-bio]

Relation: info:eu-repo/semantics/altIdentifier/pmid/33923417; PUBMED: 33923417; WOS: 000643316600001

Dostupnost: https://hal.inrae.fr/hal-03306901
https://hal.inrae.fr/hal-03306901v1/document
https://hal.inrae.fr/hal-03306901v1/file/microorganisms-09-00855%281%29.pdf
https://doi.org/10.3390/microorganisms9040855

Méthodes sans alignement et indexation pour l'analyse de données nucléiques massives

Autoři: Salson, Mikaël

Přispěvatelé: Salson, Mikaël

Témata: Alignment-free algorithm, Bioinformatique, Bioinformatics, Onco-Haematology, Onco-Hématologie, Indexes, Algorithmes sans alignement, [INFO] Computer Science [cs], Structures d'indexation

Popis souboru: application/pdf

Přístupová URL adresa: https://hal.science/tel-04362289v1

An alignment-free algorithm in comparing the similarity of protein sequences based on Pseudo-Markov transition probabilities among amino acids

Autoři: Li Y. Song T. Yang J. a další

Přispěvatelé: Li Y. Song T. Yang J. a další

Zdroj: Unpaywall 20191101

Témata: amino acid, glycosidase, xylan endo 1,3 beta xylosidase, protein, accuracy, algorithm, alignment free algorithm, amino acid sequence, Article, correlation coefficient, human, nonhuman, phylogenetic tree, probability, thermostability, chemistry, procedures, sequence alignment, sequence analysis, Algorithms, Amino Acids, Glycoside Hydrolases, Proteins

Relation: https://scholarbank.nus.edu.sg/handle/10635/161540

Dostupnost: https://scholarbank.nus.edu.sg/handle/10635/161540

Theoretical and practical analyses in metagenomic sequence classification

Autoři: AMRAOUI, HEND ELLOUMI, MOURAD Marcelloni F. a další

Přispěvatelé: AMRAOUI, HEND ELLOUMI, MOURAD Marcelloni F. a další

Témata: Alignment-free algorithm, Combinatoric, Genome analysi, Metagenomic sequence classification, Pattern discovery, Strings

Relation: info:eu-repo/semantics/altIdentifier/isbn/978-3-030-27683-6; info:eu-repo/semantics/altIdentifier/isbn/978-3-030-27684-3; info:eu-repo/semantics/altIdentifier/wos/WOS:000711190500005; ispartofbook:Communications in Computer and Information Science; International Conference on Database and Expert Systems Applications; volume:1062; firstpage:27; lastpage:37; numberofpages:11; serie:COMMUNICATIONS IN COMPUTER AND INFORMATION SCIENCE; https://hdl.handle.net/11568/1013089; http://www.springer.com/series/7899

Dostupnost: https://hdl.handle.net/11568/1013089
https://doi.org/10.1007/978-3-030-27684-3_5
http://www.springer.com/series/7899

An Alignment-Free Algorithm in Comparing the Similarity of Protein Sequences Based on Pseudo-Markov Transition Probabilities among Amino Acids

Autoři: Yushuang Li Tian Song Jiasheng Yang a další

Přispěvatelé: Yushuang Li Tian Song Jiasheng Yang a další

Zdroj: PLoS One
PLoS ONE, Vol 11, Iss 12, p e0167430 (2016)

Témata: 0301 basic medicine, sequence analysis, Glycoside Hydrolases, probability, Science, xylan endo 1,3 beta xylosidase, chemistry, Article, 03 medical and health sciences, Sequence Analysis, Protein, human, phylogenetic tree, procedures, Amino Acid Sequence, alignment free algorithm, Amino Acids, correlation coefficient, Probability, 2. Zero hunger, 0303 health sciences, algorithm, nonhuman, accuracy, Proteins, thermostability, amino acid sequence, glycosidase, sequence alignment, Medicine, protein, Sequence Alignment, amino acid, Algorithms, Research Article

Přístupová URL adresa: https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0167430&type=printable
https://pubmed.ncbi.nlm.nih.gov/27918587
https://doaj.org/article/ec0e43ba53a747c7a83d7e3edb20f7ad
https://core.ac.uk/display/149677082
https://ui.adsabs.harvard.edu/abs/2016PLoSO..1167430L/abstract
https://dx.plos.org/10.1371/journal.pone.0167430
https://europepmc.org/article/PMC/PMC5137889
https://www.ncbi.nlm.nih.gov/pubmed/27918587